FFCP PHASE1:Hg19::chr18:60190653..60190680,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54877 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22916 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C0B9,Q9BRD4 | |||
|association_with_transcript=0bp_to_ENST00000269499,NM_017742,uc002lio.2,uc002lip.3_5end | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_4_at_ZCCHC2_5end | |||
|id=chr18:60190653..60190680,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.74e-18!140;CL:0002087!5.48e-16!119;CL:0002031!8.62e-16!124;CL:0000037!5.45e-14!172;CL:0000566!5.45e-14!172;CL:0002032!6.53e-14!165;CL:0000837!6.53e-14!165;CL:0000988!1.37e-13!182;CL:0000766!1.28e-12!76;CL:0000839!1.72e-10!70;CL:0002009!1.27e-09!65;CL:0002194!1.41e-09!63;CL:0000576!1.41e-09!63;CL:0000040!1.41e-09!63;CL:0000559!1.41e-09!63;CL:0000557!1.83e-09!71;CL:0000763!3.23e-08!112;CL:0000049!3.23e-08!112;CL:0002057!7.04e-07!42;CL:0000860!7.82e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-07;33!CL:0002057;1.15e-07;33!CL:0000473;2.29e-07;39!CL:0000234;2.29e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.41e-17,136;CL:0002087,4.62e-16,115;CL:0002031,5.14e-15,120;CL:0000766,2.25e-13,72;CL:0000988,6.35e-13,177;CL:0000037,7.50e-13,168;CL:0002032,8.14e-13,161;CL:0000837,8.14e-13,161;CL:0000839,5.33e-11,66;CL:0002194,7.33e-10,59;CL:0000576,7.33e-10,59;CL:0000040,7.33e-10,59;CL:0000559,7.33e-10,59;CL:0000557,2.92e-09,67;CL:0002009,3.78e-09,61;CL:0000763,1.58e-07,108;CL:0000049,1.58e-07,108;CL:0000473,3.87e-07,48;CL:0000234,3.87e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.87e-13!115;UBERON:0002193!7.11e-12!112;UBERON:0002390!1.38e-11!102;UBERON:0003061!1.38e-11!102;UBERON:0002405!9.88e-09!115;UBERON:0002371!7.66e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.71e-14,108;UBERON:0002390,2.51e-13,98;UBERON:0003061,2.51e-13,98;UBERON:0007023,1.30e-10,114;UBERON:0002405,2.07e-09,93;UBERON:0003081,3.50e-08,203;UBERON:0002371,3.92e-07,76;UBERON:0000178,5.64e-07,15;UBERON:0000179,5.64e-07,15;UBERON:0000463,5.64e-07,15;UBERON:0001474,8.77e-07,82 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,1.26343974685366,0.261185628199839,0,1.39560233594486,0,0.263766978228454,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0,0.408001382488506,0,0,0.136874425072884,0.125542639594803,1.68109492645493,0.903106483949403,0.865818594450472,0.786728553697808,1.15148819429164,1.08371286321253,0,0.6024118375565,1.84877005083394,0.46480320348181,1.70603078984906,0.293600439334847,1.10799081706375,0.401088894940283,0.651032612147555,6.49354875295781,8.09734165047449,10.5605982730016,1.16318591023652,2.26725566213286,1.94067248950253,0.464858073811369,2.46700732813095,2.47765096716083,2.01384674625505,3.33008918487831,2.36482229888585,2.75796544589295,0.645484683583826,1.35426486594342,1.88242339542605,0.818718450173537,1.34834090667051,0,2.24650318953266,0.639337125799041,2.30895910130701,1.99463657621632,2.13112375266347,0.290209238628584,2.8369261234557,1.24564449799115,5.52747063564835,3.65038042894141,3.69221035998698,3.02699751316684,1.47311054395026,1.26584954976354,1.26753171787165,0.425208599930087,0.209658645508376,0.561643155732475,0,0.48217676009124,0.855038231223746,0.79566670879636,0.91332076882317,0,2.18455444504853,1.77901850772711,1.28019066769952,1.60158394814405,1.72425731986345,0.661044872784862,0,1.70763890732835,1.17447437874188,1.52909291250092,0,1.12101712596307,0.526768169550154,0.393419540227666,0,1.64481199199607,2.50779743086017,2.28145586643513,3.31413464014313,3.89653456815823,3.00808233589969,0.883817722424512,0.664601683750863,1.89562704635511,3.0741916734162,4.29195846947598,1.97325485524411,1.65810010671509,2.31842468588042,1.77943875794473,1.33770414044857,2.09071047609954,1.69964014046349,1.53288197440768,1.37450978193052,1.26509846009751,2.54852331459277,1.95325036156926,0,1.95747654801105,0.895906278080929,3.74792179657038,3.07810427657222,1.64225599384209,2.41928091869679,1.87208137048455,2.02754165435919,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.982343066232845,1.09288586487763,0.370784442784429,18.499201438317,19.6766603148172,11.7003005256601,0,0.571994910780128,0,1.98762407366705,1.72046919021225,1.04142150482278,1.69592382577203,1.67799774483962,0,0.626984899610432,5.42675194255591,7.47109151642091,3.3472061276467,0.805658634218294,0,0.732186172644509,1.83831540172934,0,4.10778750106767,2.46982309888787,2.0270066486998,0,3.79706263827252,2.19842092716489,7.9068250461638,15.511210565933,0.436094052142534,0.993943903390637,0.25326102332916,1.05927344650575,1.14734648299525,1.06400514659507,0,0,0.24666754841716,0.933633106199299,0.134710672069688,0.490385709340376,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0.896692083310806,0.23486899728753,0,0.280901613404497,0.204154171254893,0.245668634623536,0,1.18800285728205,1.7308685049499,0,0,0,0.250237039743928,0,0.438977620880838,0.30648779579902,1.80285670687916,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.618315175430633,0.515281080091258,0.558350568994769,0.168776332241266,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0.860413786167011,0.243947412259191,0.132529768321485,0,0.207322110030741,0.504641701751257,0,1.56449532329816,1.28648187638577,0,0,0,1.41968160047813,0.842923450390509,2.6511213287183,1.32352767278873,1.08939722046203,2.13543557199987,1.07865046528132,0.98110732562673,1.15424147083917,2.21446636387394,0,0,0,3.80265104465493,0,0.590789906681404,0.441463099414651,0.491953754172454,0.171567810298526,0.878002283269004,0,0.402115889646523,1.85176890317059,0,0,0,0.115930404975077,0.117408694235822,0.577465791044295,0,0.951270761172991,1.58040879591855,0.858486162094873,2.46217006087397,3.97807250736704,3.41851673264075,0,0.335964256397719,0.992425680696705,0.985143749731331,1.16253575405585,1.91691339582606,0,2.90559832243646,1.4512968087854,0.864719720501769,1.64115163454294,0.698476837213859,0.763976851116555,1.17217447210047,1.71072446022705,0.411309970813294,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0.797814349754612,2.08014873822732,0,0,0.532844358032199,0.57191197463259,0,0,0,1.42156779497018,0.791951872933429,0.602878754119172,0,0.299918973546171,1.2162378064119,0,0,0,0,0,0.144781306667579,2.05476322550383,0.358121926479791,1.45710687191585,1.77327684181734,2.37190332345469,2.69520376187472,0.254094624222463,1.30139853857622,0.773288812777695,0,1.27587750330633,7.49007023947182,5.9832291840805,5.8018171881045,0.736148950314839,0,0.271265023699736,0,0.356857977594324,0,0.117141414992713,0.300946099727719,6.82222512167955,0,0,0.553107505625109,0.434418072340414,0.391602314925481,0,1.6541442089831,1.50999940573032,2.24127871387233,1.21251028578504,0,0.907170879989041,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.739144404124282,2.077017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| |||
|short_description=p4@ZCCHC2 | |||
}} |
Revision as of 19:38, 20 January 2014
Short description: | p4@ZCCHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZCCHC2_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_ENST00000269499, NM_017742, uc002lio.2, uc002lip.3_5end |
EntrezGene: | ZCCHC2 |
HGNC: | 22916 |
UniProt: | Q9C0B9Q9BRD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.41e-17 | 136 |
nongranular leukocyte | 4.62e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.14e-15 | 120 |
myeloid leukocyte | 2.25e-13 | 72 |
hematopoietic cell | 6.35e-13 | 177 |
hematopoietic stem cell | 7.50e-13 | 168 |
hematopoietic oligopotent progenitor cell | 8.14e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.14e-13 | 161 |
myeloid lineage restricted progenitor cell | 5.33e-11 | 66 |
monopoietic cell | 7.33e-10 | 59 |
monocyte | 7.33e-10 | 59 |
monoblast | 7.33e-10 | 59 |
promonocyte | 7.33e-10 | 59 |
granulocyte monocyte progenitor cell | 2.92e-09 | 67 |
macrophage dendritic cell progenitor | 3.78e-09 | 61 |
myeloid cell | 1.58e-07 | 108 |
common myeloid progenitor | 1.58e-07 | 108 |
defensive cell | 3.87e-07 | 48 |
phagocyte | 3.87e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.71e-14 | 108 |
hematopoietic system | 2.51e-13 | 98 |
blood island | 2.51e-13 | 98 |
adult organism | 1.30e-10 | 114 |
immune system | 2.07e-09 | 93 |
lateral plate mesoderm | 3.50e-08 | 203 |
bone marrow | 3.92e-07 | 76 |
blood | 5.64e-07 | 15 |
haemolymphatic fluid | 5.64e-07 | 15 |
organism substance | 5.64e-07 | 15 |
bone element | 8.77e-07 | 82 |