FFCP PHASE1:Hg19::chr18:9772139..9772150,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_at_chr18:9772139..9772150,+ | |||
|id=chr18:9772139..9772150,+ | |||
|ontology_enrichment_celltype=CL:0002194!4.34e-67!63;CL:0000576!4.34e-67!63;CL:0000040!4.34e-67!63;CL:0000559!4.34e-67!63;CL:0002009!9.52e-65!65;CL:0000839!1.80e-59!70;CL:0000557!1.67e-58!71;CL:0000766!3.52e-57!76;CL:0002057!8.13e-47!42;CL:0000860!3.27e-43!45;CL:0000763!1.12e-35!112;CL:0000049!1.12e-35!112;CL:0002087!5.85e-33!119;CL:0002031!2.03e-29!124;CL:0000738!3.35e-28!140;CL:0000037!4.40e-21!172;CL:0000566!4.40e-21!172;CL:0002032!4.76e-21!165;CL:0000837!4.76e-21!165;CL:0000988!2.25e-19!182;CL:0002619!5.03e-11!3;CL:0000235!1.05e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;5.27e-49;6!CL:0000473;7.04e-33;39!CL:0000234;7.04e-33;39!CL:0000840;1.29e-18;5!CL:0000766;9.17e-18;69!CL:0000860;5.44e-17;33!CL:0002057;5.44e-17;33!CL:0002619;2.57e-16;3!CL:0000576;5.11e-14;48!CL:0000990;1.29e-12;8!CL:0000451;2.01e-10;10!CL:0000763;6.92e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.04e-54,59;CL:0000576,3.04e-54,59;CL:0000040,3.04e-54,59;CL:0000559,3.04e-54,59;CL:0002009,1.94e-52,61;CL:0000235,6.44e-49,6;CL:0000839,2.12e-48,66;CL:0000557,1.16e-47,67;CL:0000766,2.79e-44,72;CL:0000473,2.07e-33,48;CL:0000234,2.07e-33,48;CL:0000763,4.54e-29,108;CL:0000049,4.54e-29,108;CL:0002087,3.33e-27,115;CL:0002031,5.28e-26,120;CL:0000738,9.52e-23,136;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000840,1.37e-18,5;CL:0001029,1.37e-18,5;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0002619,2.78e-16,3;CL:0000860,5.67e-13,42;CL:0002057,5.67e-13,42;CL:0000990,1.34e-12,8;CL:0000451,2.08e-10,10;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.80e-12;42!CL:0000049;1.73e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.12e-51!80;UBERON:0002390!6.42e-47!102;UBERON:0003061!6.42e-47!102;UBERON:0001474!1.15e-46!86;UBERON:0002193!3.84e-44!112;UBERON:0002405!1.65e-40!115;UBERON:0004765!2.57e-38!101;UBERON:0001434!2.57e-38!101;UBERON:0002204!5.78e-22!167;UBERON:0003081!7.52e-19!216;UBERON:0000062!2.34e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.85e-42,76;UBERON:0001474,9.77e-39,82;UBERON:0004765,3.55e-35,90;UBERON:0002405,5.37e-34,93;UBERON:0002390,3.45e-32,98;UBERON:0003061,3.45e-32,98;UBERON:0001434,1.63e-31,100;UBERON:0002193,4.54e-29,108;UBERON:0002204,3.40e-18,167;UBERON:0003081,1.24e-14,203;UBERON:0000926,1.06e-08,315;UBERON:0004120,1.06e-08,315;UBERON:0006603,1.06e-08,315;UBERON:0002384,4.69e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.895661896959697,1.29557466407592,1.03030227053675,0.581592955118259,2.26725566213286,0,0.929716147622738,1.6446715520873,0.309706370895104,1.1507695692886,1.0246428261164,0,0.689491361473237,0.645484683583826,0,0.376484679085209,1.63743690034707,0.898893937780338,0.612167784741805,3.20929027076094,0.639337125799041,0,0.398927315243264,0.852449501065388,0,0,0,0.75374599577023,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0,0.419317291016752,1.34794357375794,0.600707571366025,0.803627933485401,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,3.57002133020152,3.13433527138681,5.7171923023112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93947209739836,2.34004265139238,8.17471392588005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:9772139..9772150,+ | |||
}} |
Revision as of 18:32, 20 January 2014
Short description: | p@chr18:9772139..9772150, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:9772139..9772150, + |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.85e-42 | 76 |
bone element | 9.77e-39 | 82 |
skeletal element | 3.55e-35 | 90 |
immune system | 5.37e-34 | 93 |
hematopoietic system | 3.45e-32 | 98 |
blood island | 3.45e-32 | 98 |
skeletal system | 1.63e-31 | 100 |
hemolymphoid system | 4.54e-29 | 108 |
musculoskeletal system | 3.40e-18 | 167 |
lateral plate mesoderm | 1.24e-14 | 203 |
mesoderm | 1.06e-08 | 315 |
mesoderm-derived structure | 1.06e-08 | 315 |
presumptive mesoderm | 1.06e-08 | 315 |
connective tissue | 4.69e-07 | 371 |