FFCP PHASE1:Hg19::chr17:79478430..79478482,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=71 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=144 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=31bp_to_BC018861_5end | |||
|coexpression_cluster_id=C845 | |||
|description=CAGE_peak_5_at_ACTG1_5end | |||
|id=chr17:79478430..79478482,- | |||
|ontology_enrichment_celltype=CL:0000144!5.83e-27!625;CL:0002371!8.96e-26!591;CL:0000548!1.23e-24!679;CL:0000004!1.23e-24!679;CL:0000255!1.23e-24!679;CL:0000012!5.27e-24!682;CL:0000055!8.34e-19!180;CL:0000220!5.98e-18!246;CL:0000003!6.87e-18!722;CL:0002321!9.52e-18!248;CL:0000222!5.66e-17!119;CL:0000393!2.17e-14!60;CL:0000211!2.17e-14!60;CL:0000183!2.04e-13!59;CL:0000680!2.39e-13!57;CL:0000056!2.39e-13!57;CL:0000355!2.39e-13!57;CL:0000192!3.25e-13!42;CL:0000514!3.25e-13!42;CL:0000187!2.83e-12!54;CL:0000359!9.77e-12!32;CL:0000723!9.50e-10!436;CL:0000048!1.89e-09!430;CL:0000034!2.96e-09!444;CL:0000063!1.49e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.66e-11;32!CL:0000192;1.99e-09;43!CL:0000393;1.46e-07;61!CL:0000211;1.46e-07;61!CL:0000187;3.67e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.15e-18,250;CL:0000222,2.72e-17,121;CL:0000393,1.60e-14,61;CL:0000211,1.60e-14,61;CL:0000680,1.79e-13,58;CL:0000056,1.79e-13,58;CL:0000355,1.79e-13,58;CL:0000192,3.52e-13,43;CL:0000514,3.52e-13,43;CL:0000187,2.14e-12,55;CL:0000359,8.44e-12,32;CL:0000723,1.31e-10,433;CL:0000048,2.68e-10,427;CL:0000034,3.91e-10,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.99e-09;43!CL:0000355;2.87e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.38e-14!79;UBERON:0007798!1.38e-14!79;UBERON:0000486!3.02e-14!82;UBERON:0000914!8.12e-14!83;UBERON:0002329!8.12e-14!83;UBERON:0003077!8.12e-14!83;UBERON:0003059!8.12e-14!83;UBERON:0007282!8.12e-14!83;UBERON:0009618!8.12e-14!83;UBERON:0007285!8.12e-14!83;UBERON:0004290!4.99e-13!70;UBERON:0001637!3.10e-12!42;UBERON:0003509!3.10e-12!42;UBERON:0004572!3.10e-12!42;UBERON:0001134!1.46e-11!61;UBERON:0002036!1.46e-11!61;UBERON:0003082!1.46e-11!61;UBERON:0000055!2.07e-11!69;UBERON:0001981!3.59e-11!60;UBERON:0007500!3.59e-11!60;UBERON:0004537!3.59e-11!60;UBERON:0006965!3.59e-11!60;UBERON:0002385!5.72e-11!63;UBERON:0001015!5.72e-11!63;UBERON:0000383!5.72e-11!63;UBERON:0005256!1.76e-10!143;UBERON:0003914!9.27e-10!118;UBERON:0004535!1.13e-09!110;UBERON:0004872!3.18e-09!84;UBERON:0000490!4.55e-09!138;UBERON:0001009!8.88e-09!113;UBERON:0004573!6.33e-08!33;UBERON:0004571!6.33e-08!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.69e-09;42!UBERON:0003509;8.69e-09;42!UBERON:0004572;8.69e-09;42!UBERON:0007500;4.77e-08;56!UBERON:0001981;4.77e-08;56!UBERON:0004537;4.77e-08;56!UBERON:0003914;2.27e-07;74!UBERON:0002049;2.77e-07;75!UBERON:0007798;2.77e-07;75!UBERON:0004573;4.26e-07;33!UBERON:0004571;4.26e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.62e-15,78;UBERON:0002049,9.85e-15,78;UBERON:0007798,9.85e-15,78;UBERON:0000486,2.87e-14,83;UBERON:0002329,3.75e-13,71;UBERON:0003059,3.75e-13,71;UBERON:0007282,3.75e-13,71;UBERON:0004290,3.75e-13,71;UBERON:0009618,3.75e-13,71;UBERON:0007524,6.07e-13,73;UBERON:0003077,1.82e-12,72;UBERON:0007285,1.82e-12,72;UBERON:0001637,2.66e-12,42;UBERON:0003509,2.66e-12,42;UBERON:0004572,2.66e-12,42;UBERON:0001134,1.13e-11,62;UBERON:0002036,1.13e-11,62;UBERON:0003082,1.13e-11,62;UBERON:0000055,1.83e-11,68;UBERON:0007500,2.67e-11,59;UBERON:0001981,2.67e-11,59;UBERON:0004537,2.67e-11,59;UBERON:0006965,2.67e-11,59;UBERON:0002385,4.40e-11,64;UBERON:0001015,4.40e-11,64;UBERON:0000383,4.40e-11,64;UBERON:0000490,1.32e-10,148;UBERON:0003914,6.41e-10,117;UBERON:0004535,1.32e-09,109;UBERON:0004872,3.72e-09,83;UBERON:0000926,4.80e-09,315;UBERON:0004120,4.80e-09,315;UBERON:0006603,4.80e-09,315;UBERON:0001009,1.03e-08,112;UBERON:0005256,1.72e-08,122;UBERON:0004573,5.78e-08,33;UBERON:0004571,5.78e-08,33;UBERON:0002204,2.73e-07,167;UBERON:0003104,2.78e-07,160;UBERON:0009142,2.78e-07,160 | |||
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| |||
|short_description=p5@ACTG1 | |||
}} |
Revision as of 17:58, 20 January 2014
Short description: | p5@ACTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACTG1_5end |
Coexpression cluster: | C845_Alveolar_Hair_Olfactory_Osteoblast_Endothelial_Fibroblast_Smooth |
Association with transcript: | 31bp_to_BC018861_5end |
EntrezGene: | ACTG1 |
HGNC: | 144 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.15e-18 | 250 |
mesodermal cell | 2.72e-17 | 121 |
electrically responsive cell | 1.60e-14 | 61 |
electrically active cell | 1.60e-14 | 61 |
muscle precursor cell | 1.79e-13 | 58 |
myoblast | 1.79e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.79e-13 | 58 |
smooth muscle cell | 3.52e-13 | 43 |
smooth muscle myoblast | 3.52e-13 | 43 |
muscle cell | 2.14e-12 | 55 |
vascular associated smooth muscle cell | 8.44e-12 | 32 |
somatic stem cell | 1.31e-10 | 433 |
multi fate stem cell | 2.68e-10 | 427 |
stem cell | 3.91e-10 | 441 |