FFCP PHASE1:Hg19::chr17:73636235..73636249,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=40030 | |||
|TSSclassifier=strong | |||
|UniProt=Q71RC9 | |||
|association_with_transcript=26bp_to_AF370408_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_3_at_C17orf109_5end | |||
|id=chr17:73636235..73636249,+ | |||
|ontology_enrichment_celltype=CL:0000239!8.81e-09!3;CL:1000615!8.81e-09!3;CL:0002306!8.81e-09!3;CL:1000507!1.67e-07!12;CL:1000494!1.67e-07!12;CL:1000449!2.55e-07!16;CL:0002681!4.65e-07!13;CL:0002584!4.65e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002537;8.55e-14;5!CL:0000313;1.13e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,8.56e-14,5;CL:0000313,1.13e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.09e-08;1!UBERON:0003124;2.09e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.13e-08;1!DOID:5093;1.24e-07;4!DOID:1612;1.24e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.13e-08,1;DOID:5093,1.08e-07,4;DOID:1612,1.08e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.32e-14!14;UBERON:0000158!1.32e-14!14;UBERON:0000464!4.09e-12!104;UBERON:0000058!6.73e-12!26;UBERON:0004876!2.80e-11!20;UBERON:0000466!1.46e-10!126;UBERON:0000080!2.54e-10!18;UBERON:0002120!2.54e-10!18;UBERON:0004875!2.54e-10!18;UBERON:0005721!2.54e-10!18;UBERON:0005754!2.54e-10!18;UBERON:0007297!2.54e-10!18;UBERON:0000305!3.92e-10!7;UBERON:0001008!9.22e-10!45;UBERON:0002113!1.01e-09!27;UBERON:0003918!1.01e-09!27;UBERON:0005095!1.01e-09!27;UBERON:0007687!1.01e-09!27;UBERON:0002553!1.20e-09!70;UBERON:0000489!1.91e-09!32;UBERON:0003064!4.71e-09!37;UBERON:0004871!8.29e-09!8;UBERON:0006853!8.81e-09!3;UBERON:0007685!8.81e-09!3;UBERON:0004134!8.81e-09!3;UBERON:0006555!9.68e-09!17;UBERON:0005103!9.68e-09!17;UBERON:0000083!9.68e-09!17;UBERON:0009201!9.68e-09!17;UBERON:0004819!9.68e-09!17;UBERON:0006553!9.68e-09!17;UBERON:0003074!9.68e-09!17;UBERON:0003060!9.68e-09!17;UBERON:0003887!1.35e-08!21;UBERON:0006554!1.35e-08!44;UBERON:0000478!9.51e-08!24;UBERON:0003886!1.17e-07!63;UBERON:0004119!1.65e-07!169;UBERON:0000925!1.65e-07!169;UBERON:0006595!1.65e-07!169;UBERON:0009773!1.67e-07!12;UBERON:0001231!1.67e-07!12;UBERON:0004810!1.67e-07!12;UBERON:0003135!1.85e-07!11;UBERON:0003133!2.55e-07!48;UBERON:0004211!2.55e-07!16;UBERON:0001285!2.55e-07!16;UBERON:0007684!2.55e-07!16;UBERON:0003220!2.55e-07!16;UBERON:0004208!2.55e-07!16;UBERON:0005177!4.36e-07!107;UBERON:0001225!4.65e-07!13;UBERON:0008987!4.65e-07!13;UBERON:0003103!4.82e-07!69;UBERON:0000341!6.31e-07!2;UBERON:0004175!6.90e-07!25;UBERON:0000077!7.04e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;7.56e-15;2!UBERON:0005631;6.74e-12;10!UBERON:0000158;6.74e-12;10!UBERON:0001723;3.12e-10;3!UBERON:0001033;3.12e-10;3!UBERON:0000305;5.43e-10;7!UBERON:0004911;1.13e-08;1!UBERON:0002372;1.63e-08;1!UBERON:0001961;1.63e-08;1!UBERON:0001744;1.63e-08;1!UBERON:0001042;1.63e-08;1!UBERON:0001735;1.63e-08;1!UBERON:0007029;4.89e-08;1!UBERON:0000996;4.89e-08;1!UBERON:0006554;1.10e-07;30!UBERON:0001008;1.10e-07;30!UBERON:0000478;2.30e-07;24!UBERON:0002113;6.59e-07;24!UBERON:0011143;6.59e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.52e-15,2;UBERON:0005631,8.52e-13,14;UBERON:0000158,8.52e-13,14;UBERON:0001723,2.98e-10,3;UBERON:0001033,2.98e-10,3;UBERON:0010056,2.98e-10,3;UBERON:0000305,5.43e-10,7;UBERON:0004871,8.48e-09,8;UBERON:0004911,1.13e-08,1;UBERON:0002372,1.63e-08,1;UBERON:0001961,1.63e-08,1;UBERON:0001744,1.63e-08,1;UBERON:0001735,1.63e-08,1;UBERON:0007029,5.07e-08,1;UBERON:0001008,5.31e-08,48;UBERON:0000996,5.43e-08,1;UBERON:0000478,2.31e-07,24;UBERON:0001042,7.42e-07,10;UBERON:0009145,7.42e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,1.11235332835329,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80479845162965,1.23224539367064,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,4.15538004464362,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.564862804660675,0,0,2.21715076768338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3696911453106,6.23625829748541,21.5012491469462,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.789147245095469,0,0,0,0,0,1.5625665665114,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0.615602068030377,0,0,0.0897576444097721,0,5.10401855571071,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,4.57051862845614,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,3.87956065953678,0,0.677942222341597,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,1.73372556058236,1.62609223218494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,3.193285325855,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,1.29068207646083,0,0,0.423387050190929,0,0,0,12.6396637931505,0,0.243835849964539,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0.0757786982182394,0,0,0,4.90438158372256,1.66645102024618,0.129177819672012,0.124149428591716,0,4.20071244635888,2.02117188958219,2.61260097476354,2.39563310759697,4.24317933991901,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0,0 | |||
|short_description=p3@C17orf109 | |||
}} |
Revision as of 17:20, 20 January 2014
Short description: | p3@C17orf109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C17orf109_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 26bp_to_AF370408_5end |
EntrezGene: | C17orf109 |
HGNC: | 40030 |
UniProt: | Q71RC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 8.56e-14 | 5 |
serous secreting cell | 1.13e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
throat | 5.52e-15 | 2 |
extraembryonic membrane | 8.52e-13 | 14 |
membranous layer | 8.52e-13 | 14 |
tongue | 2.98e-10 | 3 |
gustatory system | 2.98e-10 | 3 |
future tongue | 2.98e-10 | 3 |
amnion | 5.43e-10 | 7 |
somatic layer of lateral plate mesoderm | 8.48e-09 | 8 |
epithelium of female gonad | 1.13e-08 | 1 |
tonsil | 1.63e-08 | 1 |
mucosa-associated lymphoid tissue | 1.63e-08 | 1 |
lymphoid tissue | 1.63e-08 | 1 |
tonsillar ring | 1.63e-08 | 1 |
surface | 5.07e-08 | 1 |
renal system | 5.31e-08 | 48 |
vagina | 5.43e-08 | 1 |
extraembryonic structure | 2.31e-07 | 24 |
chordate pharynx | 7.42e-07 | 10 |
pharyngeal region of foregut | 7.42e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.13e-08 | 1 |
thoracic cancer | 1.08e-07 | 4 |
breast cancer | 1.08e-07 | 4 |