FFCP PHASE1:Hg19::chr17:72563552..72563583,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-70bp_to_ENST00000425002_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_1_at_ENST00000425002_5end | |||
|id=chr17:72563552..72563583,- | |||
|ontology_enrichment_celltype=CL:0002057!1.48e-79!42;CL:0000860!2.41e-73!45;CL:0002009!2.20e-58!65;CL:0002194!1.03e-57!63;CL:0000576!1.03e-57!63;CL:0000040!1.03e-57!63;CL:0000559!1.03e-57!63;CL:0000766!3.14e-53!76;CL:0000557!2.69e-52!71;CL:0000839!1.32e-50!70;CL:0002087!6.40e-41!119;CL:0000738!5.85e-39!140;CL:0000763!2.14e-36!112;CL:0000049!2.14e-36!112;CL:0002031!3.79e-35!124;CL:0000037!5.07e-31!172;CL:0000566!5.07e-31!172;CL:0002032!7.42e-29!165;CL:0000837!7.42e-29!165;CL:0000988!2.30e-28!182;CL:0002393!5.56e-20!9;CL:0002397!5.56e-20!9;CL:0000875!3.65e-08!3;CL:0002396!3.65e-08!3;CL:0000840!7.25e-08!5;CL:0001029!7.25e-08!5;CL:0000767!1.15e-07!3;CL:0000134!1.58e-07!358;CL:0000842!2.76e-07!3;CL:0002320!4.19e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.80e-76;33!CL:0002057;1.80e-76;33!CL:0000576;4.07e-57;48!CL:0000473;4.66e-51;39!CL:0000234;4.66e-51;39!CL:0000766;5.88e-41;69!CL:0002393;2.80e-20;6!CL:0002397;2.80e-20;6!CL:0002087;2.33e-16;104!CL:0000875;8.51e-16;3!CL:0002396;8.51e-16;3!CL:0000763;1.65e-15;100!CL:0000767;1.01e-14;3!CL:0000226;6.60e-14;3!CL:0000842;6.60e-14;3!CL:0000738;1.26e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-113,42;CL:0002057,1.21e-113,42;CL:0000473,1.51e-98,48;CL:0000234,1.51e-98,48;CL:0002009,2.00e-79,61;CL:0002194,2.09e-77,59;CL:0000576,2.09e-77,59;CL:0000040,2.09e-77,59;CL:0000559,2.09e-77,59;CL:0000766,2.78e-75,72;CL:0000557,8.97e-72,67;CL:0000839,1.44e-68,66;CL:0000763,7.40e-51,108;CL:0000049,7.40e-51,108;CL:0000738,2.43e-46,136;CL:0002087,2.58e-44,115;CL:0002031,4.11e-37,120;CL:0000037,4.59e-36,168;CL:0002393,5.72e-34,9;CL:0002397,5.72e-34,9;CL:0000988,7.74e-34,177;CL:0002032,1.08e-31,161;CL:0000837,1.08e-31,161;CL:0000875,8.52e-16,3;CL:0002396,8.52e-16,3;CL:0000767,1.01e-14,3;CL:0000226,6.61e-14,3;CL:0000842,6.61e-14,3;CL:0000134,6.34e-13,354;CL:0002320,1.63e-12,361;CL:0000219,4.49e-11,386;CL:0000048,2.61e-09,427;CL:0000723,4.57e-09,433;CL:0000034,9.43e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.96e-76;42!CL:0000049;2.26e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.28e-58!102;UBERON:0003061!3.28e-58!102;UBERON:0002193!1.47e-55!112;UBERON:0002371!7.20e-45!80;UBERON:0001474!8.85e-41!86;UBERON:0002405!9.09e-40!115;UBERON:0004765!1.09e-32!101;UBERON:0001434!1.09e-32!101;UBERON:0003081!1.85e-21!216;UBERON:0002204!1.65e-15!167;UBERON:0000178!8.74e-08!15;UBERON:0000179!8.74e-08!15;UBERON:0000463!8.74e-08!15;UBERON:0002106!3.94e-07!3;UBERON:0004854!3.94e-07!3;UBERON:0009034!3.94e-07!3;UBERON:0002095!3.94e-07!3;UBERON:0004782!3.94e-07!3;UBERON:0003281!3.94e-07!3;UBERON:0009664!3.94e-07!3;UBERON:0002296!3.94e-07!3;UBERON:0005602!3.94e-07!3;UBERON:0001179!3.94e-07!3;UBERON:0006293!3.94e-07!3;UBERON:0004177!5.50e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;5.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.03e-67,98;UBERON:0003061,6.03e-67,98;UBERON:0002371,1.57e-62,76;UBERON:0002193,4.36e-60,108;UBERON:0001474,1.77e-57,82;UBERON:0002405,1.78e-56,93;UBERON:0004765,8.84e-52,90;UBERON:0001434,6.34e-46,100;UBERON:0003081,2.07e-28,203;UBERON:0002204,2.25e-26,167;UBERON:0000926,1.45e-16,315;UBERON:0004120,1.45e-16,315;UBERON:0006603,1.45e-16,315;UBERON:0002384,5.88e-12,371;UBERON:0002106,6.72e-07,3;UBERON:0004854,6.72e-07,3;UBERON:0009034,6.72e-07,3;UBERON:0002095,6.72e-07,3;UBERON:0004782,6.72e-07,3;UBERON:0003281,6.72e-07,3;UBERON:0009664,6.72e-07,3;UBERON:0002296,6.72e-07,3;UBERON:0005602,6.72e-07,3;UBERON:0001179,6.72e-07,3;UBERON:0006293,6.72e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4407426443737,2.68680578668049,2.16742572642506,0,0,0,0,0,0,6.09394949385065,3.00816671205213,0.217010870715852,0,0,0,1.30858414901608,1.88937971844405,8.49044214157357,0.929716147622738,2.05583944010913,6.19412741790207,0.28769239232215,1.5369642391746,4.49316236788312,1.03423704220986,1.93645405075148,4.06279459783025,1.31769637679823,2.18324920046277,11.2361742222542,2.75475503133812,5.1348644332175,8.95071976118658,0.659702600373432,1.19678194572979,4.68847225585964,0.290209238628584,0.56738522469114,2.4912889959823,0.75374599577023,0,6.29847649644838,0.605399502633369,1.84138817993782,3.79754864929061,28.0969530794883,35.5049180941623,23.9010855879549,1.90958672949042,2.10247649978109,1.12507910687956,78.3785045288434,59.0782531281298,52.4246121304499,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.37285620900479,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,2.84823593587081,0.952927101831156,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0.992332043623902,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0,0,0,0,0,0,0.314231179832004,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,1.03382309777839,0.644578879735772,4.19752854884702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0.31037357147929,0,0,0,0,0,0.202056159043763,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000425002 | |||
}} |
Revision as of 17:11, 20 January 2014
Short description: | p1@ENST00000425002 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000425002_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -70bp_to_ENST00000425002_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.03e-67 | 98 |
blood island | 6.03e-67 | 98 |
bone marrow | 1.57e-62 | 76 |
hemolymphoid system | 4.36e-60 | 108 |
bone element | 1.77e-57 | 82 |
immune system | 1.78e-56 | 93 |
skeletal element | 8.84e-52 | 90 |
skeletal system | 6.34e-46 | 100 |
lateral plate mesoderm | 2.07e-28 | 203 |
musculoskeletal system | 2.25e-26 | 167 |
mesoderm | 1.45e-16 | 315 |
mesoderm-derived structure | 1.45e-16 | 315 |
presumptive mesoderm | 1.45e-16 | 315 |
connective tissue | 5.88e-12 | 371 |
spleen | 6.72e-07 | 3 |
gastrointestinal system mesentery | 6.72e-07 | 3 |
stomach region | 6.72e-07 | 3 |
mesentery | 6.72e-07 | 3 |
gastrointestinal system serosa | 6.72e-07 | 3 |
mesentery of stomach | 6.72e-07 | 3 |
gut mesentery | 6.72e-07 | 3 |
dorsal mesentery | 6.72e-07 | 3 |
dorsal mesogastrium | 6.72e-07 | 3 |
peritoneal cavity | 6.72e-07 | 3 |
spleen primordium | 6.72e-07 | 3 |