FFCP PHASE1:Hg19::chr17:71283257..71283270,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr17:71283257..71283270,- | |||
|id=chr17:71283257..71283270,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;5.69e-21;2!CL:0002537;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,6.96e-21,2;CL:0000008,6.96e-21,2;CL:0002537,3.22e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000008;5.69e-21;2!UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.65e-27!115;UBERON:0002616!1.72e-22!59;UBERON:0001049!1.98e-21!57;UBERON:0005068!1.98e-21!57;UBERON:0006241!1.98e-21!57;UBERON:0007135!1.98e-21!57;UBERON:0003075!1.46e-19!86;UBERON:0007284!1.46e-19!86;UBERON:0002346!2.32e-18!90;UBERON:0000955!5.73e-18!69;UBERON:0006238!5.73e-18!69;UBERON:0005743!1.68e-17!86;UBERON:0001017!5.35e-17!82;UBERON:0000073!3.37e-15!94;UBERON:0001016!3.37e-15!94;UBERON:0004733!2.87e-14!12;UBERON:0002028!2.87e-14!12;UBERON:0007277!2.87e-14!12;UBERON:0004732!4.67e-13!13;UBERON:0002780!7.12e-13!41;UBERON:0001890!7.12e-13!41;UBERON:0006240!7.12e-13!41;UBERON:0000153!1.29e-12!129;UBERON:0007811!1.29e-12!129;UBERON:0003080!1.75e-12!42;UBERON:0002020!4.02e-12!34;UBERON:0003528!4.02e-12!34;UBERON:0002298!4.20e-12!8;UBERON:0001893!5.62e-12!34;UBERON:0000033!1.88e-11!123;UBERON:0001950!2.98e-11!20;UBERON:0000200!3.27e-11!6;UBERON:0003076!4.05e-11!15;UBERON:0003057!4.05e-11!15;UBERON:0002680!6.89e-11!9;UBERON:0001895!6.89e-11!9;UBERON:0010092!6.89e-11!9;UBERON:0002791!1.12e-10!33;UBERON:0000956!1.40e-10!25;UBERON:0000203!1.40e-10!25;UBERON:0003056!4.04e-10!61;UBERON:0002619!4.26e-10!22;UBERON:0001869!2.40e-09!32;UBERON:0004121!2.43e-09!169;UBERON:0002771!4.85e-09!3;UBERON:0000924!5.97e-09!173;UBERON:0006601!5.97e-09!173;UBERON:0006331!8.91e-09!3;UBERON:0000988!1.67e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;5.69e-21;2!UBERON:0001777;5.69e-21;2!UBERON:0000970;1.19e-18;20!UBERON:0002104;8.29e-18;21!UBERON:0000020;2.44e-16;23!UBERON:0001032;1.07e-15;24!UBERON:0004456;1.07e-15;24!UBERON:0003891;3.42e-11;4!UBERON:0000964;3.42e-11;4!UBERON:0010409;3.42e-11;4!UBERON:0000019;2.17e-09;19!UBERON:0000047;2.17e-09;19!UBERON:0004088;2.17e-09;19!UBERON:0010230;2.17e-09;19!UBERON:0000966;2.53e-09;5!UBERON:0005388;2.53e-09;5!UBERON:0001802;2.53e-09;5!UBERON:0001456;1.37e-08;21!UBERON:0000305;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,6.96e-21,2;UBERON:0001777,6.96e-21,2;UBERON:0000970,8.78e-18,21;UBERON:0002104,8.78e-18,21;UBERON:0000020,1.13e-15,24;UBERON:0001032,1.13e-15,24;UBERON:0004456,1.13e-15,24;UBERON:0003891,3.79e-11,4;UBERON:0000964,3.79e-11,4;UBERON:0010409,3.79e-11,4;UBERON:0004348,3.79e-11,4;UBERON:0005427,3.79e-11,4;UBERON:0000019,5.93e-09,20;UBERON:0000047,5.93e-09,20;UBERON:0010312,5.93e-09,20;UBERON:0004088,5.93e-09,20;UBERON:0010230,5.93e-09,20;UBERON:0003072,5.93e-09,20;UBERON:0004128,5.93e-09,20;UBERON:0003071,5.93e-09,20;UBERON:0001456,3.15e-08,22;UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6;UBERON:0000305,6.04e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,2.93774963014692,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,4.36006919477604,0,1.16241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0,0.124149428591716,0,0.0636471582781649,0,0.435433495793923,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | |||
|short_description=p@chr17:71283257..71283270,- | |||
}} |
Revision as of 17:08, 20 January 2014
Short description: | p@chr17:71283257..71283270, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:71283257..71283270, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 6.96e-21 | 2 |
migratory cranial neural crest cell | 6.96e-21 | 2 |
amnion mesenchymal stem cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 6.96e-21 | 2 |
substantia propria of cornea | 6.96e-21 | 2 |
eye | 8.78e-18 | 21 |
visual system | 8.78e-18 | 21 |
sense organ | 1.13e-15 | 24 |
sensory system | 1.13e-15 | 24 |
entire sense organ system | 1.13e-15 | 24 |
stroma | 3.79e-11 | 4 |
cornea | 3.79e-11 | 4 |
eye surface | 3.79e-11 | 4 |
optic eminence | 3.79e-11 | 4 |
corneal primordium | 3.79e-11 | 4 |
camera-type eye | 5.93e-09 | 20 |
simple eye | 5.93e-09 | 20 |
immature eye | 5.93e-09 | 20 |
ocular region | 5.93e-09 | 20 |
eyeball of camera-type eye | 5.93e-09 | 20 |
optic cup | 5.93e-09 | 20 |
optic vesicle | 5.93e-09 | 20 |
eye primordium | 5.93e-09 | 20 |
face | 3.15e-08 | 22 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
amnion | 6.04e-07 | 7 |