FFCP PHASE1:Hg19::chr17:56769382..56769417,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11737 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWB6 | |||
|association_with_transcript=0bp_to_ENST00000240361,ENST00000349033,ENST00000389934,NM_001201457,NM_031272,NM_198393,uc002iwr.1,uc002iws.1,uc010dcz.1,uc010dda.1,uc010wnz.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_TEX14_5end | |||
|id=chr17:56769382..56769417,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.33e-20;10!UBERON:0005564;1.33e-20;10!UBERON:0003056;1.04e-08;3!UBERON:0006215;1.51e-08;3 | |||
|ontology_enrichment_disease=DOID:5409!3.52e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;6.42e-23;4!DOID:1325;1.49e-13;7!DOID:3904;1.49e-13;7!DOID:3905;9.23e-11;9!DOID:1324;8.09e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,6.42e-23,4;DOID:1325,1.49e-13,7;DOID:3904,1.49e-13,7;DOID:3905,9.23e-11,9;DOID:1324,8.09e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0003076!1.57e-18!15;UBERON:0003057!1.57e-18!15;UBERON:0000988!2.37e-18!3;UBERON:0002148!8.03e-13!2;UBERON:0009662!8.03e-13!2;UBERON:0004733!3.30e-12!12;UBERON:0002028!3.30e-12!12;UBERON:0007277!3.30e-12!12;UBERON:0002298!5.72e-12!8;UBERON:0004732!2.98e-11!13;UBERON:0002680!8.04e-11!9;UBERON:0001895!8.04e-11!9;UBERON:0010092!8.04e-11!9;UBERON:0001049!4.69e-10!57;UBERON:0005068!4.69e-10!57;UBERON:0006241!4.69e-10!57;UBERON:0007135!4.69e-10!57;UBERON:0007023!1.11e-09!115;UBERON:0001017!3.90e-09!82;UBERON:0000073!6.66e-09!94;UBERON:0001016!6.66e-09!94;UBERON:0002240!7.13e-09!3;UBERON:0006331!7.72e-09!3;UBERON:0005743!1.31e-08!86;UBERON:0000955!7.14e-08!69;UBERON:0006238!7.14e-08!69;UBERON:0000473!1.24e-07!8;UBERON:0003075!2.33e-07!86;UBERON:0007284!2.33e-07!86;UBERON:0002346!6.11e-07!90;UBERON:0007190!6.57e-07!1;UBERON:0002336!6.97e-07!1;UBERON:0001018!6.97e-07!1;UBERON:0002473!6.97e-07!1;UBERON:0005340!6.97e-07!1;UBERON:0002316!6.97e-07!1;UBERON:0003544!6.97e-07!1;UBERON:0001020!6.97e-07!1;UBERON:0005970!6.97e-07!1;UBERON:0002437!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.50e-25;8!UBERON:0003135;8.41e-19;11!UBERON:0000991;3.51e-10;21!UBERON:0003101;9.54e-10;22!UBERON:0000079;9.54e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.44e-25,8;UBERON:0003135,8.15e-19,11;UBERON:0000991,3.46e-10,21;UBERON:0009196,3.46e-10,21;UBERON:0009117,3.46e-10,21;UBERON:0005564,3.46e-10,21;UBERON:0004176,9.40e-10,22;UBERON:0003101,9.40e-10,22;UBERON:0000079,9.40e-10,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2362671643966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0,0,0,0,0,0,0,0.807818799687949,0,0,0,0,0,0,0,0,0,0,2.08729105996604,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822251547880505,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0,0,0,0,0,0,11.0609528212909,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,4.40004335877004,0,0,3.47214540203349,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25636785363138,30.0083644944228,53.5928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TEX14 | |||
}} |
Revision as of 16:33, 20 January 2014
Short description: | p2@TEX14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TEX14_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000240361, ENST00000349033, ENST00000389934, NM_001201457, NM_031272, NM_198393, uc002iwr.1, uc002iws.1, uc010dcz.1, uc010dda.1, uc010wnz.1_5end |
EntrezGene: | TEX14 |
HGNC: | 11737 |
UniProt: | Q8IWB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.44e-25 | 8 |
male reproductive organ | 8.15e-19 | 11 |
gonad | 3.46e-10 | 21 |
indifferent external genitalia | 3.46e-10 | 21 |
indifferent gonad | 3.46e-10 | 21 |
gonad primordium | 3.46e-10 | 21 |
external genitalia | 9.40e-10 | 22 |
male organism | 9.40e-10 | 22 |
male reproductive system | 9.40e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 6.42e-23 | 4 |
bronchus cancer | 1.49e-13 | 7 |
bronchogenic carcinoma | 1.49e-13 | 7 |
lung carcinoma | 9.23e-11 | 9 |
lung cancer | 8.09e-07 | 15 |