FFCP PHASE1:Hg19::chr17:53396302..53396319,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_at_chr17:53396302..53396319,+ | |||
|id=chr17:53396302..53396319,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;9.18e-26;2!CL:1000448;9.18e-26;2!CL:0002308;9.18e-26;2!CL:0002140;9.18e-26;2!CL:0000622;3.60e-11;5!CL:0000154;1.57e-09;6!CL:0000150;8.85e-07;9!CL:0000362;8.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,9.18e-26,2;CL:1000448,9.18e-26,2;CL:0002308,9.18e-26,2;CL:0002140,9.18e-26,2;CL:0000622,3.60e-11,5;CL:0000154,1.57e-09,6;CL:0000150,8.85e-07,9;CL:0000362,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.46e-50;1!UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease=DOID:3151!1.69e-09!1;DOID:3149!1.69e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!2.67e-12!6;UBERON:0002771!1.77e-11!3;UBERON:0007029!1.32e-09!1;UBERON:0001871!2.27e-09!7;UBERON:0007023!2.48e-09!115;UBERON:0002372!2.55e-09!1;UBERON:0001961!2.55e-09!1;UBERON:0001744!2.55e-09!1;UBERON:0001735!2.55e-09!1;UBERON:0000014!3.84e-09!4;UBERON:0001950!4.24e-09!20;UBERON:0002581!5.28e-09!1;UBERON:0002619!2.71e-08!22;UBERON:0000956!2.57e-07!25;UBERON:0000203!2.57e-07!25;UBERON:0001872!4.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;9.18e-26;2!UBERON:0007771;9.18e-26;2!UBERON:0003297;9.18e-26;2!UBERON:0001821;9.18e-26;2!UBERON:0003487;9.18e-26;2!UBERON:0001820;9.18e-26;2!UBERON:0001987;8.82e-14;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,9.18e-26,2;UBERON:0007771,9.18e-26,2;UBERON:0003297,9.18e-26,2;UBERON:0001821,9.18e-26,2;UBERON:0003487,9.18e-26,2;UBERON:0001820,9.18e-26,2;UBERON:0005089,9.18e-26,2;UBERON:0005088,9.18e-26,2;UBERON:0001987,8.82e-14,4;UBERON:0004340,8.82e-14,4;UBERON:0003124,1.89e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1892494909085,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3684197103026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,26.1671991979785,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:53396302..53396319,+ | |||
}} |
Revision as of 16:22, 20 January 2014
Short description: | p@chr17:53396302..53396319, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:53396302..53396319, + |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 9.18e-26 | 2 |
epithelial cell of sweat gland | 9.18e-26 | 2 |
epithelial cell of skin gland | 9.18e-26 | 2 |
acinar cell of sebaceous gland | 9.18e-26 | 2 |
acinar cell | 3.60e-11 | 5 |
protein secreting cell | 1.57e-09 | 6 |
glandular epithelial cell | 8.85e-07 | 9 |
epidermal cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 9.18e-26 | 2 |
epidermis gland | 9.18e-26 | 2 |
gland of integumental system | 9.18e-26 | 2 |
sebaceous gland | 9.18e-26 | 2 |
skin sebaceous gland | 9.18e-26 | 2 |
sweat gland | 9.18e-26 | 2 |
sweat gland placode | 9.18e-26 | 2 |
sebaceous gland placode | 9.18e-26 | 2 |
placenta | 8.82e-14 | 4 |
allantois | 8.82e-14 | 4 |
chorion | 1.89e-08 | 7 |