FFCP PHASE1:Hg19::chr17:48262662..48262702,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AB032018_5end | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_2_at_AB032018_5end | |||
|id=chr17:48262662..48262702,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.13e-36!180;CL:0000057!4.01e-24!75;CL:0000183!5.02e-13!59;CL:0000048!8.33e-13!430;CL:0000680!1.43e-12!57;CL:0000056!1.43e-12!57;CL:0000355!1.43e-12!57;CL:0000144!1.62e-12!625;CL:0000723!3.16e-12!436;CL:0000034!1.08e-11!444;CL:0000187!1.17e-11!54;CL:0002371!2.67e-11!591;CL:0000393!8.45e-10!60;CL:0000211!8.45e-10!60;CL:0002334!1.69e-09!12;CL:0002620!8.42e-09!23;CL:0000192!1.91e-08!42;CL:0000514!1.91e-08!42;CL:0000548!1.91e-07!679;CL:0000004!1.91e-07!679;CL:0000255!1.91e-07!679;CL:0002570!3.29e-07!8;CL:0000012!3.97e-07!682;CL:0002320!6.54e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.24e-12;12!CL:0000134;1.66e-11;55!CL:0000723;4.42e-10;61!CL:0000048;1.80e-09;58!CL:0002570;2.38e-09;8!CL:0000499;1.44e-08;28!CL:0000057;5.48e-08;73!CL:0002320;5.80e-08;188!CL:0002569;1.53e-07;6!CL:0000034;2.38e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.97e-20,76;CL:0000048,2.05e-16,427;CL:0000723,1.17e-15,433;CL:0000034,1.09e-14,441;CL:0002334,2.53e-12,12;CL:0002320,3.37e-11,361;CL:0000134,9.18e-10,354;CL:0002570,3.16e-09,8;CL:0000187,8.21e-09,55;CL:0000680,1.06e-08,58;CL:0000056,1.06e-08,58;CL:0000355,1.06e-08,58;CL:0000499,1.27e-08,28;CL:0000219,2.18e-08,386;CL:0002569,1.84e-07,6;CL:0000393,3.44e-07,61;CL:0000211,3.44e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.70e-15!83;UBERON:0002329!6.70e-15!83;UBERON:0003077!6.70e-15!83;UBERON:0003059!6.70e-15!83;UBERON:0007282!6.70e-15!83;UBERON:0009618!6.70e-15!83;UBERON:0007285!6.70e-15!83;UBERON:0004290!4.34e-13!70;UBERON:0001134!1.57e-12!61;UBERON:0002036!1.57e-12!61;UBERON:0003082!1.57e-12!61;UBERON:0002385!1.15e-11!63;UBERON:0001015!1.15e-11!63;UBERON:0000383!1.15e-11!63;UBERON:0000486!1.86e-10!82;UBERON:0005256!1.48e-09!143;UBERON:0001013!2.01e-07!14;UBERON:0002384!4.07e-07!375;UBERON:0002199!6.34e-07!45;UBERON:0002416!6.34e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.56e-10;14!UBERON:0003104;9.72e-09;7!UBERON:0009142;9.72e-09;7!UBERON:0002384;1.21e-08;198!UBERON:0004457;6.09e-08;9!UBERON:0000042;6.09e-08;9!UBERON:0003422;1.53e-07;6!UBERON:0003688;3.42e-07;6!UBERON:0002358;3.42e-07;6!UBERON:0003684;3.42e-07;6!UBERON:0001178;3.42e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-11,371;UBERON:0001013,6.20e-10,14;UBERON:0007524,3.48e-09,73;UBERON:0001134,4.62e-09,62;UBERON:0002036,4.62e-09,62;UBERON:0003082,4.62e-09,62;UBERON:0007503,4.95e-09,78;UBERON:0002329,8.25e-09,71;UBERON:0003059,8.25e-09,71;UBERON:0007282,8.25e-09,71;UBERON:0004290,8.25e-09,71;UBERON:0009618,8.25e-09,71;UBERON:0003077,1.47e-08,72;UBERON:0007285,1.47e-08,72;UBERON:0002385,1.65e-08,64;UBERON:0001015,1.65e-08,64;UBERON:0000383,1.65e-08,64;UBERON:0000486,1.35e-07,83;UBERON:0003104,1.41e-07,160;UBERON:0009142,1.41e-07,160;UBERON:0003422,1.84e-07,6;UBERON:0005256,2.66e-07,122;UBERON:0003688,4.14e-07,6;UBERON:0002358,4.14e-07,6;UBERON:0003684,4.14e-07,6;UBERON:0001178,4.14e-07,6 | |||
|phase1_expression=8.17552706717505,5.56661362116556,6.62485699251064,2.00146596706261,5.81049422755474,3.48935409640147,7.59899634504932,1.26343974685366,0,0.245733936501509,0,0,3.4289707169699,2.84662611808107,0,2.01697543935533,1.20538905604795,0,1.46379839637152,0.738726348460727,0.408001382488506,2.5076377718247,0.572471974262113,1.09499540058307,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,7.92747883429888,3.61439152384566,1.50401373190767,13.181033225435,0,4.86634870302636,0.661743720148475,3.32594096193846,2.10803485663503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,31.8062049085004,3.92554586160197,1.72131935057184,6.02356903572509,5.67469411517371,3.92474320099615,2.1349799145941,32.0667812942308,0,0.538842688278752,0.163461903113459,1.05950199351452,6.91411109375999,0.70296429550139,0,0,1.49448680551801,0.23486899728753,0.161872944368132,0.421352420106746,0.408308342509787,1.22834317311768,0,2.37600571456411,15.3305496152705,0,3.59309070908119,0.336672227908132,0.500474079487857,0,2.63386572528503,13.1789752193578,5.85928429735728,6.23877007380116,2.51145489964407,9.1829677191984,5.93409323246773,3.30100205692843,0.721367704669072,2.83404594050192,2.97786970130544,10.6329089311998,0.974370051611986,1.26216887122057,4.32634523618807,0.80823028409406,4.26011511019937,0.906768884048762,2.20428770003634,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,7.71889125831462,0,4.17931135228781,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,7.4083322039652,7.3504355692771,0,0,0,0,0,2.40194934417936,0.109750285408626,0,0,0,0.325808305310325,0,0,0.34779121492523,2.11335649624479,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,3.4214489204541,0.205654985406647,0,0,0.112131084345361,0,1.68678057388185,4.13669490424889,7.15312891703765,16.060752298564,3.45719551560332,2.08014873822732,1.54324424557285,0,1.8649552531127,19.8739411184825,31.4720531127037,3.29296134712308,12.7037111874557,16.3480296421571,5.543663110534,1.20575750823834,1.74306691720059,0.699810938274399,0,0,0,11.2623682081044,5.7430967917057,0,0.868687840005475,2.67119219315498,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,4.00136416847742,1.62759014219841,87.347761842939,112.410262942212,55.8266549220129,12.5341314042203,0.601892199455438,0,4.1389228517002,7.97070718242524,2.21243002250044,2.5196248195744,2.15381273209015,5.49029478097369,0,0,0,0.303127571446259,9.98612637062982,14.5147340798247,7.19512642674453,11.8165719431808,23.014127743512,11.0199668359903,2.55853624533352,41.5003116550507,2.96836132889982,3.85524234506639,14.9151849263027,1.88892458831761,2.07701771673448,1.97557643381931,0,0,0,7.34812468253483,4.00600569614778,4.98272776845812,0,0.0770153371044148,0,0,0,0,0,1.29549549661284,0,1.89662506280697,3.01013864312912,0,0,0,0,0,0,0.328014645699706,0,0,1.09883357782012,0.742585499285292,0,0,8.03419649220798,1.83674364755032,0.616194468458578,0.767518373630648,0.137836572484531,2.57808587683857,3.91545073568417,1.36362603865761,20.3883361631029,0,0.768760269460425,0,0.10115778085555,2.32422774648643,3.77774816196768,0.6970372701606,1.54016790088044,0,0,0.37064843820784,0,1.86079184679834,3.16379424718726,5.90953601163857,1.79128453917934,0.42793898803392,0.318203247925937,0.78494864019923,2.87795932133304,6.03981465419321,3.29874726567922,0.606547444719948,0,0,2.43816869544795,3.41198885483798,0,1.22849920267187,13.0092997397416,0,0,2.65375590096488,0,1.73632660280006,5.9030527684197,0,1.54911749049875,0.563391205064483,4.15892921391749,12.5758772496795,0.35667105148125,0.354761064070598,10.1331664942879,4.93942339439853,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,6.53183134089796,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.769502585037971,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,5.61804353109152,0,0,0,0,0,3.62972148145992,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0.146178634172371,0.164230914106418,0,0,6.32746074185491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,1.28929632425987,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0,0.604651252380536,11.1692963898145,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0,2.89659637035217,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4328604663981,5.14169281663894,1.10961172300523,1.3258210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| |||
|short_description=p2@AB032018 | |||
}} |
Revision as of 16:11, 20 January 2014
Short description: | p2@AB032018 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB032018_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 0bp_to_AB032018_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.97e-20 | 76 |
multi fate stem cell | 2.05e-16 | 427 |
somatic stem cell | 1.17e-15 | 433 |
stem cell | 1.09e-14 | 441 |
preadipocyte | 2.53e-12 | 12 |
connective tissue cell | 3.37e-11 | 361 |
mesenchymal cell | 9.18e-10 | 354 |
mesenchymal stem cell of adipose | 3.16e-09 | 8 |
muscle cell | 8.21e-09 | 55 |
muscle precursor cell | 1.06e-08 | 58 |
myoblast | 1.06e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-08 | 58 |
stromal cell | 1.27e-08 | 28 |
motile cell | 2.18e-08 | 386 |
mesenchymal stem cell of umbilical cord | 1.84e-07 | 6 |
electrically responsive cell | 3.44e-07 | 61 |
electrically active cell | 3.44e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.45e-11 | 371 |
adipose tissue | 6.20e-10 | 14 |
dense mesenchyme tissue | 3.48e-09 | 73 |
skeletal muscle tissue | 4.62e-09 | 62 |
striated muscle tissue | 4.62e-09 | 62 |
myotome | 4.62e-09 | 62 |
epithelial vesicle | 4.95e-09 | 78 |
somite | 8.25e-09 | 71 |
presomitic mesoderm | 8.25e-09 | 71 |
presumptive segmental plate | 8.25e-09 | 71 |
dermomyotome | 8.25e-09 | 71 |
trunk paraxial mesoderm | 8.25e-09 | 71 |
paraxial mesoderm | 1.47e-08 | 72 |
presumptive paraxial mesoderm | 1.47e-08 | 72 |
muscle tissue | 1.65e-08 | 64 |
musculature | 1.65e-08 | 64 |
musculature of body | 1.65e-08 | 64 |
multilaminar epithelium | 1.35e-07 | 83 |
mesenchyme | 1.41e-07 | 160 |
entire embryonic mesenchyme | 1.41e-07 | 160 |
mesenchyme of umbilical cord | 1.84e-07 | 6 |
trunk mesenchyme | 2.66e-07 | 122 |
omentum | 4.14e-07 | 6 |
peritoneum | 4.14e-07 | 6 |
abdominal cavity | 4.14e-07 | 6 |
visceral peritoneum | 4.14e-07 | 6 |