FFCP PHASE1:Hg19::chr17:39777431..39777463,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt=Q04695 | |||
|association_with_transcript=-169bp_to_EF608070_5end | |||
|description=CAGE_peak_2_at_EF608070_5end | |||
|id=chr17:39777431..39777463,- | |||
|ontology_enrichment_celltype=CL:0002159!2.40e-08!13;CL:0002076!3.70e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000154;5.53e-08;6!CL:0000346;8.60e-08;3!CL:1000428;8.60e-08;3!CL:0002166;8.60e-08;3!CL:0002231;1.52e-07;3!CL:0000222;8.10e-07;1!CL:0002336;8.78e-07;1!CL:0002261;8.78e-07;1!CL:0002170;8.78e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000154,7.16e-08,6;CL:0000346,8.93e-08,3;CL:1000428,8.93e-08,3;CL:0002231,1.09e-07,3;CL:0002166,1.29e-07,3;CL:0002336,8.81e-07,1;CL:0002261,8.81e-07,1;CL:0002170,8.81e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!8.03e-09!95;UBERON:0000924!5.75e-07!173;UBERON:0006601!5.75e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;3.91e-12;4!UBERON:0011159;1.04e-09;5!UBERON:0001950;4.79e-08;20!UBERON:0006947;6.78e-08;3!UBERON:0004054;6.78e-08;3!UBERON:0000412;8.60e-08;3!UBERON:0001992;8.60e-08;3!UBERON:0001870;1.52e-07;3!UBERON:0002619;2.70e-07;22!UBERON:0000998;8.10e-07;1!UBERON:0006868;8.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,3.44e-12,4;UBERON:0011159,1.47e-09,5;UBERON:0001950,5.70e-08,20;UBERON:0006947,7.79e-08,3;UBERON:0004054,7.79e-08,3;UBERON:0000412,8.93e-08,3;UBERON:0001992,8.93e-08,3;UBERON:0001870,2.67e-07,3;UBERON:0002619,3.16e-07,22;UBERON:0000998,7.90e-07,1;UBERON:0006868,7.90e-07,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.289693037921647,0.795285947051099,0,0,0,0,0.261958150995425,0.364295288292542,0.370784442784429,0.649094787309367,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.427114777637135,0,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0,0.323292113637624,0,0.403008392910561,0.169560592310488,0.57978255948989,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,1.28648187638577,2.76269842704961,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,0.402115889646523,4.35165692245089,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,2.81201501960331,1.00789276919316,0.992425680696705,0.716468181622786,0.581267877027924,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0.553107505625109,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0.308419387605311,0.710246901252508,0.0821271560138091,0,0.348631135379878,0,1.40354529212299,1.38121483403844,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,1.6068392984416,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0.495854746082934,0.192190067365106,0.382838137483752,0.910420027699949,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0.545999645631943,0.424216295861138,0,0,0,0,0,0,1.42037263873893,0,0,0.430234056612155,0.0982490410131212,0.35667105148125,0,0,0.329294892959902,0,0,0.384888450902048,1.34060455107157,0,0,0.43050537267123,0,3.54744122829341,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,2.95575571379191,2.98871982376605,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75508317723178,0,0.41827123283581,0.153900517007594,0,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.391329237864179,0,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0,0,0,1.2029051231617,0,0,0,0.19980960958213,0,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0.544813624446302,0,0,0.415440338029185,0,0,0.91124334987037,1.34173875039706,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0.366078794705889,1.001527445652,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0.302461847526478,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0.601030435988874,0,0,0,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0,5.04739592914604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,1.9998739585493,0,0,0,0,1.258915569475,1.24415452006595,0,0,0,0,0.509197589862076,0,6.44465974146811,0.558644917973244,0,0,0,0,0.6124909547064,0,0,0,1.8460472781668,0,0.553258019713743,1.29180516505481,0,0,0,0.183428598521679,0.577628330751691,0.381382095467167,0,0,0,0,0,0,0,0,0.675375846183947,2.34323429584154,0.206686796501184,0.887821342714695,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,1.11813715056843,0,0,0.235479278551542,0,0,0,0,0,0,0,0.116241425368125,0,0,1.03608082081518,0.51215543128185,0,0,0.236664001461131,0,5.08064460229115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35982980381829,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,0.535928260312357,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,1.95945073107265,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@EF608070 | |||
}} |
Revision as of 15:19, 20 January 2014
Short description: | p2@EF608070 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EF608070_5end |
Coexpression cluster: | NA |
Association with transcript: | -169bp_to_EF608070_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
protein secreting cell | 7.16e-08 | 6 |
hair follicle dermal papilla cell | 8.93e-08 | 3 |
stem cell of epidermis | 8.93e-08 | 3 |
epithelial cell of prostate | 1.09e-07 | 3 |
epithelial cell of Malassez | 1.29e-07 | 3 |
buccal mucosa cell | 8.81e-07 | 1 |
endothelial cell of viscerocranial mucosa | 8.81e-07 | 1 |
keratinized cell of the oral mucosa | 8.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 3.44e-12 | 4 |
primary subdivision of cranial skeletal system | 1.47e-09 | 5 |
neocortex | 5.70e-08 | 20 |
male genital duct | 7.79e-08 | 3 |
internal male genitalia | 7.79e-08 | 3 |
dermal papilla | 8.93e-08 | 3 |
papillary layer of dermis | 8.93e-08 | 3 |
frontal cortex | 2.67e-07 | 3 |
regional part of cerebral cortex | 3.16e-07 | 22 |
seminal vesicle | 7.90e-07 | 1 |
seminal fluid secreting gland | 7.90e-07 | 1 |