FFCP PHASE1:Hg19::chr17:39165376..39165381,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=83896 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16778 | |||
|TSSclassifier=weak | |||
|UniProt=Q9BYR8 | |||
|association_with_transcript=-10bp_to_ENST00000391588,NM_031958,uc002hvt.1_5end | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRTAP3-1_5end | |||
|id=chr17:39165376..39165381,- | |||
|ontology_enrichment_celltype=CL:0000223!4.55e-08!59;CL:0000047!2.70e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.65e-09;12!CL:0002563;3.45e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.19e-10,58;CL:0000182,1.61e-09,12;CL:0002563,3.45e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.87e-14;2!UBERON:0010056;1.87e-14;2!UBERON:0004161;2.31e-10;11!UBERON:0009497;8.70e-09;13!UBERON:0000358;1.63e-08;1!UBERON:0001041;8.54e-08;30!UBERON:0003104;1.03e-07;31!CL:0000223;2.98e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.54e-14!106;DOID:0050687!8.03e-12!143;DOID:162!1.87e-09!235;DOID:299!2.37e-09!25;DOID:14566!4.95e-09!239;DOID:7!5.36e-09!39;DOID:1749!2.66e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0050619;5.82e-08;1!DOID:3151;5.82e-08;1!DOID:1357;5.82e-08;1!DOID:3149;5.82e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.68e-08,1;DOID:1357,6.68e-08,1;DOID:3151,7.16e-08,1;DOID:3149,7.16e-08,1;DOID:305,3.49e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003929!5.05e-10!54;UBERON:0006562!1.19e-09!11;UBERON:0004921!1.54e-09!129;UBERON:0004185!1.54e-09!129;UBERON:0000344!7.67e-09!12;UBERON:0001723!9.53e-09!3;UBERON:0001033!9.53e-09!3;UBERON:0010056!9.53e-09!3;UBERON:0000077!1.19e-08!130;UBERON:0001046!1.27e-08!19;UBERON:0005911!1.47e-08!82;UBERON:0001007!4.65e-08!155;UBERON:0001555!4.65e-08!155;UBERON:0007026!4.65e-08!155;UBERON:0003350!4.67e-08!5;UBERON:0001042!6.16e-08!10;UBERON:0009145!6.16e-08!10;UBERON:0004119!9.10e-07!169;UBERON:0000925!9.10e-07!169;UBERON:0006595!9.10e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.27e-21;3!UBERON:0001033;2.27e-21;3!UBERON:0007029;9.79e-09;1!UBERON:0002426;1.75e-08;1!UBERON:0003831;1.75e-08;1!UBERON:0003898;1.75e-08;1!UBERON:0004830;1.75e-08;1!UBERON:0003830;1.75e-08;1!UBERON:0005175;1.75e-08;1!UBERON:0001774;1.75e-08;1!UBERON:0001103;1.75e-08;1!UBERON:0004913;2.79e-08;1!UBERON:0003703;2.79e-08;1!UBERON:0001174;2.79e-08;1!UBERON:0004914;2.79e-08;1!UBERON:0001242;3.45e-08;4!UBERON:0001262;3.45e-08;4!UBERON:0004786;3.45e-08;4!UBERON:0004808;3.45e-08;4!UBERON:0001277;3.45e-08;4!UBERON:0001052;4.26e-08;4!UBERON:0001764;5.82e-08;1!UBERON:0001825;5.82e-08;1!UBERON:0000014;6.26e-08;4!UBERON:0002423;8.53e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.36e-21,3;UBERON:0001033,2.36e-21,3;UBERON:0010056,2.36e-21,3;UBERON:0004921,2.97e-10,118;UBERON:0007499,1.66e-09,25;UBERON:0003929,3.77e-09,54;UBERON:0009856,4.03e-09,26;UBERON:0007029,9.79e-09,1;UBERON:0002426,1.75e-08,1;UBERON:0003831,1.75e-08,1;UBERON:0003898,1.75e-08,1;UBERON:0004830,1.75e-08,1;UBERON:0003830,1.75e-08,1;UBERON:0005175,1.75e-08,1;UBERON:0001774,1.75e-08,1;UBERON:0001103,1.75e-08,1;UBERON:0010084,1.75e-08,1;UBERON:0005911,2.35e-08,82;UBERON:0004913,2.69e-08,1;UBERON:0003703,2.69e-08,1;UBERON:0001174,2.69e-08,1;UBERON:0004914,2.69e-08,1;UBERON:0001242,3.45e-08,4;UBERON:0001262,3.45e-08,4;UBERON:0004786,3.45e-08,4;UBERON:0004808,3.45e-08,4;UBERON:0001277,3.45e-08,4;UBERON:0001052,4.26e-08,4;UBERON:0001764,6.68e-08,1;UBERON:0001825,6.68e-08,1;UBERON:0000014,6.94e-08,4;UBERON:0001007,7.93e-08,145;UBERON:0001555,7.93e-08,145;UBERON:0007026,7.93e-08,145;UBERON:0008835,9.17e-08,22;UBERON:0003894,9.17e-08,22;UBERON:0009854,2.04e-07,23;UBERON:0004119,7.79e-07,160;UBERON:0000925,7.79e-07,160;UBERON:0006595,7.79e-07,160;UBERON:0009497,8.37e-07,25;UBERON:0000015,8.37e-07,25;UBERON:0002423,8.37e-07,25;UBERON:0006235,8.37e-07,25;UBERON:0004161,8.37e-07,25;UBERON:0001042,9.25e-07,10;UBERON:0009145,9.25e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0,0.772921620136887,1.67505170698431,0,0,0,0,0,0.710019185033229,1.81353776809752,2.20428770003634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6402136888904,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,28.2811112044396,0,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.341380344856499,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,87.9763826397987,0,0,0,0.0897576444097721,0,0.957003479195758,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0.163232808159148,23.3232567866002,0.216388639742091,0,0,0,0,0,0,0,8.02577647298789,0,0,0.782658475728359,0,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0.853828638089378,0,0.347119476670262,0,0.783532859223623,0,0,0,0,0,0,0,0,0,0,0,0.782205530939212,0,0,0,0,0.114536596165916,0,0,0,0,5.30026403687095,3.13808538937,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,5.82479747637269,4.88455730304787,4.36804049420182,5.66189768375153,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5018336599544,0,0,0,0,0.20170506870352,0,0,0.327543835020193,4.5835386727284,0,0,0,0,0,0.548257766857182,0,0.351742488719241,0.766574565837572,0,0,0,0,0,0,0,0,0,0,4.56048747757483,0.235479278551542,0,7.00680408284473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.328549483524,0,0,0,0.196300467230486,0,0,0,0,146.68471990386,0,0,0,0.79062257427272,0,2.41540549706678,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,3.04803447055746,43.4636292378307,0.0673520530145875,0,0,0.0814032686109745,0,0,0,9.38563769613817,0,0,0,0,0 | |||
|short_description=p1@KRTAP3-1 | |||
}} |
Revision as of 15:15, 20 January 2014
Short description: | p1@KRTAP3-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KRTAP3-1_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -10bp_to_ENST00000391588, NM_031958, uc002hvt.1_5end |
EntrezGene: | KRTAP3-1 |
HGNC: | 16778 |
UniProt: | Q9BYR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.19e-10 | 58 |
hepatocyte | 1.61e-09 | 12 |
intestinal epithelial cell | 3.45e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.68e-08 | 1 |
maxillary sinus cancer | 6.68e-08 | 1 |
skin squamous cell carcinoma | 7.16e-08 | 1 |
keratoacanthoma | 7.16e-08 | 1 |
carcinoma | 3.49e-07 | 106 |