FFCP PHASE1:Hg19::chr17:38657781..38657786,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=84951 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24352 | |||
|TSSclassifier=weak | |||
|UniProt=Q8IZW8 | |||
|association_with_transcript=62bp_to_ENST00000377816_5end | |||
|description=CAGE_peak_15_at_TNS4_5end | |||
|id=chr17:38657781..38657786,- | |||
|ontology_enrichment_celltype=CL:0002076!6.48e-33!43;CL:0000066!1.40e-30!254;CL:0000223!5.87e-26!59;CL:0002368!4.32e-24!13;CL:0002251!1.67e-15!21;CL:0002202!8.34e-15!9;CL:0002632!8.34e-15!9;CL:0002328!1.45e-09!3;CL:0000622!2.74e-09!5;CL:0000068!3.04e-09!3;CL:0000069!3.04e-09!3;CL:0000307!3.04e-09!3;CL:0000377!3.04e-09!3;CL:0002623!4.56e-09!3;CL:0000154!1.01e-07!6;CL:0002150!1.23e-07!3;CL:0000861!1.23e-07!3;CL:0000240!2.52e-07!6;CL:0000311!2.52e-07!6;CL:0000079!2.52e-07!6;CL:0000237!2.52e-07!6;CL:0000036!2.52e-07!6;CL:0000357!2.52e-07!6;CL:0000114!2.52e-07!6;CL:0000063!4.39e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.66e-33;13!CL:0002328;3.73e-28;3!CL:0002202;3.06e-25;9!CL:0002632;3.06e-25;9!CL:0002076;5.92e-23;42!CL:0000622;6.94e-17;5!CL:0000154;3.59e-14;6!CL:0000307;4.83e-13;3!CL:0002623;4.83e-13;3!CL:0002336;2.07e-10;1!CL:0002261;2.07e-10;1!CL:0002252;2.07e-10;1!CL:0002170;2.07e-10;1!CL:0000150;1.25e-09;9!CL:0002251;1.90e-07;20!CL:0000240;5.92e-07;6!CL:0000311;5.92e-07;6!CL:0000079;5.92e-07;6!CL:0000237;5.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,9.54e-34,13;CL:0002076,3.90e-29,42;CL:0002328,3.27e-28,3;CL:0002202,2.59e-25,9;CL:0002632,2.59e-25,9;CL:0000223,1.40e-20,58;CL:0000622,5.60e-17,5;CL:0000154,3.00e-14,6;CL:0002623,3.57e-13,3;CL:0000068,4.29e-13,3;CL:0000069,4.29e-13,3;CL:0000307,4.29e-13,3;CL:0000377,4.29e-13,3;CL:0002252,1.73e-10,1;CL:0002336,3.01e-10,1;CL:0002261,3.01e-10,1;CL:0002170,3.01e-10,1;CL:0000150,1.11e-09,9;CL:0000066,9.61e-09,253;CL:0002251,1.81e-07,20;CL:0000240,7.30e-07,6;CL:0000311,7.30e-07,6;CL:0000079,7.30e-07,6;CL:0000237,7.30e-07,6;CL:0000036,7.30e-07,6;CL:0000357,7.30e-07,6;CL:0000114,7.30e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;4.83e-13;3!CL:0000223;4.43e-10;58!CL:0000357;5.92e-07;6!CL:0000114;5.92e-07;6 | |||
|ontology_enrichment_disease=DOID:305!1.49e-17!106;DOID:1749!7.14e-13!14;DOID:0050687!8.24e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.07e-10;1!DOID:3149;2.07e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.33e-10,1;DOID:3149,4.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.78e-21!169;UBERON:0000925!1.78e-21!169;UBERON:0006595!1.78e-21!169;UBERON:0001004!2.34e-19!72;UBERON:0000065!5.01e-13!53;UBERON:0001007!7.93e-13!155;UBERON:0001555!7.93e-13!155;UBERON:0007026!7.93e-13!155;UBERON:0003729!8.76e-13!5;UBERON:0000077!9.46e-13!130;UBERON:0005631!9.77e-11!14;UBERON:0000158!9.77e-11!14;UBERON:0003343!2.86e-10!4;UBERON:0004785!2.86e-10!4;UBERON:0008947!3.39e-10!38;UBERON:0003258!3.39e-10!38;UBERON:0001041!7.43e-10!98;UBERON:0000161!1.02e-09!35;UBERON:0004815!1.45e-09!3;UBERON:0002031!1.45e-09!3;UBERON:0000072!3.68e-09!46;UBERON:0007196!4.52e-09!14;UBERON:0001558!4.52e-09!14;UBERON:0004921!4.68e-09!129;UBERON:0004185!4.68e-09!129;UBERON:0003124!6.78e-09!7;UBERON:0000166!1.54e-08!21;UBERON:0005911!1.54e-08!82;UBERON:0005153!7.73e-08!37;UBERON:0000165!1.72e-07!28;UBERON:0000930!1.72e-07!28;UBERON:0002185!3.06e-07!4;UBERON:0000344!4.81e-07!12;UBERON:0003102!6.59e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.73e-28;3!UBERON:0002031;3.73e-28;3!UBERON:0002185;3.70e-17;5!UBERON:0007196;4.01e-15;15!UBERON:0001558;4.01e-15;15!UBERON:0000485;2.01e-12;7!UBERON:0005178;4.66e-09;34!UBERON:0002224;4.66e-09;34!UBERON:0005181;4.68e-09;35!UBERON:0000065;5.26e-08;44!UBERON:0001044;5.92e-07;6!UBERON:0003293;5.92e-07;6!UBERON:0003294;5.92e-07;6!UBERON:0010047;5.92e-07;6!UBERON:0003408;5.92e-07;6!UBERON:0000167;5.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.27e-28,3;UBERON:0002031,3.27e-28,3;UBERON:0002185,3.42e-17,5;UBERON:0007196,3.62e-15,15;UBERON:0001558,3.62e-15,15;UBERON:0000485,8.49e-10,9;UBERON:0005178,2.91e-09,34;UBERON:0002224,2.91e-09,34;UBERON:0005181,5.51e-09,35;UBERON:0001004,9.37e-09,74;UBERON:0000065,1.37e-07,54;UBERON:0004119,2.13e-07,160;UBERON:0000925,2.13e-07,160;UBERON:0006595,2.13e-07,160;UBERON:0001044,5.10e-07,6;UBERON:0003293,5.10e-07,6;UBERON:0003294,5.10e-07,6;UBERON:0010047,5.10e-07,6;UBERON:0000167,5.10e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59710612239464,1.50602959389125,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.603173834469785,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806026704325635,0,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,1.32227932288782,0.192190067365106,1.40373983744043,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73199802905922,0.670302275535787,1.08890984861323,0,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,2.37020365273626,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0,0,0.19351266257817,0.0730893170861856,0.246346371159628,0,0,0,0,0,0,0.977756913674015,0,0,0,0,0,0,0.432164393964449,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,1.12482367165896,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,0.366857197043358,0.462102664601353,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.236387681767936,0.444925607568277,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,1.24329698497822,0.3414369541879,1.38251932362818,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@TNS4 | |||
}} |
Revision as of 15:12, 20 January 2014
Short description: | p15@TNS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_TNS4_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000377816_5end |
EntrezGene: | TNS4 |
HGNC: | 24352 |
UniProt: | Q8IZW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 9.54e-34 | 13 |
endo-epithelial cell | 3.90e-29 | 42 |
bronchial epithelial cell | 3.27e-28 | 3 |
epithelial cell of tracheobronchial tree | 2.59e-25 | 9 |
epithelial cell of lower respiratory tract | 2.59e-25 | 9 |
endodermal cell | 1.40e-20 | 58 |
acinar cell | 5.60e-17 | 5 |
protein secreting cell | 3.00e-14 | 6 |
acinar cell of salivary gland | 3.57e-13 | 3 |
duct epithelial cell | 4.29e-13 | 3 |
branched duct epithelial cell | 4.29e-13 | 3 |
tracheal epithelial cell | 4.29e-13 | 3 |
tracheoblast | 4.29e-13 | 3 |
epithelial cell of esophagus | 1.73e-10 | 1 |
buccal mucosa cell | 3.01e-10 | 1 |
endothelial cell of viscerocranial mucosa | 3.01e-10 | 1 |
keratinized cell of the oral mucosa | 3.01e-10 | 1 |
glandular epithelial cell | 1.11e-09 | 9 |
epithelial cell | 9.61e-09 | 253 |
epithelial cell of alimentary canal | 1.81e-07 | 20 |
stratified squamous epithelial cell | 7.30e-07 | 6 |
keratin accumulating cell | 7.30e-07 | 6 |
stratified epithelial cell | 7.30e-07 | 6 |
keratinizing barrier epithelial cell | 7.30e-07 | 6 |
epithelial fate stem cell | 7.30e-07 | 6 |
stratified epithelial stem cell | 7.30e-07 | 6 |
surface ectodermal cell | 7.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.27e-28 | 3 |
epithelium of bronchus | 3.27e-28 | 3 |
bronchus | 3.42e-17 | 5 |
tracheobronchial tree | 3.62e-15 | 15 |
lower respiratory tract | 3.62e-15 | 15 |
simple columnar epithelium | 8.49e-10 | 9 |
thoracic cavity element | 2.91e-09 | 34 |
thoracic cavity | 2.91e-09 | 34 |
thoracic segment organ | 5.51e-09 | 35 |
respiratory system | 9.37e-09 | 74 |
respiratory tract | 1.37e-07 | 54 |
endoderm-derived structure | 2.13e-07 | 160 |
endoderm | 2.13e-07 | 160 |
presumptive endoderm | 2.13e-07 | 160 |
saliva-secreting gland | 5.10e-07 | 6 |
gland of oral region | 5.10e-07 | 6 |
gland of foregut | 5.10e-07 | 6 |
oral gland | 5.10e-07 | 6 |
oral cavity | 5.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.33e-10 | 1 |
keratoacanthoma | 4.33e-10 | 1 |