FFCP PHASE1:Hg19::chr17:38171624..38171635,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1440 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2438 | |||
|TSSclassifier=strong | |||
|UniProt=P09919,Q8N4W3,Q6FH65,A8MXR7 | |||
|association_with_transcript=10bp_to_ENST00000394149,NM_000759,NM_001178147,NM_172219,NM_172220,NR_033662_5end | |||
|coexpression_cluster_id=C1432 | |||
|description=CAGE_peak_2_at_CSF3_5end | |||
|id=chr17:38171624..38171635,+ | |||
|ontology_enrichment_celltype=CL:0000680!9.72e-14!57;CL:0000056!9.72e-14!57;CL:0000355!9.72e-14!57;CL:0000359!6.78e-13!32;CL:0000187!1.55e-11!54;CL:0000183!2.13e-11!59;CL:0002539!4.40e-10!10;CL:0000192!9.14e-10!42;CL:0000514!9.14e-10!42;CL:0000220!1.52e-09!246;CL:0000393!1.83e-09!60;CL:0000211!1.83e-09!60;CL:0002321!2.68e-09!248;CL:0000222!1.49e-07!119;CL:0002159!3.05e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.68e-16;32!CL:0002539;1.70e-14;10!CL:0000154;2.68e-09;6!CL:0000192;5.83e-09;43!CL:0002202;3.90e-08;9!CL:0002632;3.90e-08;9!CL:0002595;1.04e-07;5!CL:0000622;1.65e-07;5!CL:0000515;2.30e-07;3!CL:0002621;2.68e-07;3!CL:0002368;3.02e-07;13!CL:0002328;3.96e-07;3!CL:0000307;4.09e-07;3!CL:0002166;8.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.67e-17,32;CL:0000680,1.11e-14,58;CL:0000056,1.11e-14,58;CL:0000355,1.11e-14,58;CL:0002539,1.59e-14,10;CL:0002321,8.43e-13,250;CL:0000192,1.18e-11,43;CL:0000514,1.18e-11,43;CL:0000187,1.82e-11,55;CL:0000393,8.07e-10,61;CL:0000211,8.07e-10,61;CL:0000154,3.12e-09,6;CL:0002202,3.13e-08,9;CL:0002632,3.13e-08,9;CL:0002595,9.54e-08,5;CL:0000622,1.91e-07,5;CL:0002621,2.20e-07,3;CL:0000222,2.67e-07,121;CL:0002368,2.68e-07,13;CL:0002328,3.12e-07,3;CL:0000068,3.63e-07,3;CL:0000069,3.63e-07,3;CL:0000307,3.63e-07,3;CL:0000377,3.63e-07,3;CL:0002166,6.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000355;4.03e-09;58!CL:0000514;5.83e-09;43!CL:0000377;4.09e-07;3 | |||
|ontology_enrichment_disease=DOID:2394!1.16e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.14e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.20e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!2.20e-16!82;UBERON:0000914!2.80e-16!83;UBERON:0002329!2.80e-16!83;UBERON:0003077!2.80e-16!83;UBERON:0003059!2.80e-16!83;UBERON:0007282!2.80e-16!83;UBERON:0009618!2.80e-16!83;UBERON:0007285!2.80e-16!83;UBERON:0004573!5.12e-16!33;UBERON:0004571!5.12e-16!33;UBERON:0004290!1.23e-14!70;UBERON:0000055!3.21e-13!69;UBERON:0001134!4.76e-13!61;UBERON:0002036!4.76e-13!61;UBERON:0003082!4.76e-13!61;UBERON:0001637!6.45e-13!42;UBERON:0003509!6.45e-13!42;UBERON:0004572!6.45e-13!42;UBERON:0002385!2.73e-12!63;UBERON:0001015!2.73e-12!63;UBERON:0000383!2.73e-12!63;UBERON:0004872!2.86e-12!84;UBERON:0001981!3.12e-12!60;UBERON:0007500!3.12e-12!60;UBERON:0004537!3.12e-12!60;UBERON:0006965!3.12e-12!60;UBERON:0002049!4.18e-10!79;UBERON:0007798!4.18e-10!79;UBERON:0004237!4.40e-10!10;UBERON:0004695!4.40e-10!10;UBERON:0002111!4.40e-10!10;UBERON:0004178!4.40e-10!10;UBERON:0005256!2.18e-09!143;UBERON:0000926!4.07e-09!448;UBERON:0004120!4.07e-09!448;UBERON:0006603!4.07e-09!448;UBERON:0001009!1.49e-08!113;UBERON:0004535!1.50e-08!110;UBERON:0003104!1.81e-08!238;UBERON:0009142!1.81e-08!238;UBERON:0000992!2.91e-08!13;UBERON:0001135!4.15e-08!15;UBERON:0000490!1.02e-07!138;UBERON:0003914!2.43e-07!118;UBERON:0002118!4.66e-07!5;UBERON:0004532!4.66e-07!5;UBERON:0000947!4.67e-07!21;UBERON:0010191!4.67e-07!21;UBERON:0002204!6.59e-07!167;UBERON:0000923!7.68e-07!604;UBERON:0005291!7.68e-07!604;UBERON:0006598!7.68e-07!604;UBERON:0002532!7.68e-07!604;UBERON:0002100!8.84e-07!216;UBERON:0002050!9.08e-07!605;UBERON:0005423!9.08e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.65e-15;33!UBERON:0004571;2.65e-15;33!UBERON:0004237;1.70e-14;10!UBERON:0004695;1.70e-14;10!UBERON:0002111;1.70e-14;10!UBERON:0004178;1.70e-14;10!UBERON:0002118;1.08e-11;5!UBERON:0000992;1.07e-10;13!UBERON:0002385;1.15e-10;31!UBERON:0001015;1.15e-10;31!UBERON:0000383;1.15e-10;31!UBERON:0001135;4.23e-09;15!UBERON:0001637;9.73e-09;42!UBERON:0003509;9.73e-09;42!UBERON:0004572;9.73e-09;42!UBERON:0003513;7.10e-08;7!UBERON:0003834;1.04e-07;5!UBERON:0001533;1.04e-07;5!UBERON:0000991;1.54e-07;21!UBERON:0001949;2.68e-07;3!UBERON:0004815;3.96e-07;3!UBERON:0002031;3.96e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.26e-16,33;UBERON:0004571,1.26e-16,33;UBERON:0000486,2.64e-16,83;UBERON:0004237,1.59e-14,10;UBERON:0004695,1.59e-14,10;UBERON:0002111,1.59e-14,10;UBERON:0004178,1.59e-14,10;UBERON:0002329,1.69e-14,71;UBERON:0003059,1.69e-14,71;UBERON:0007282,1.69e-14,71;UBERON:0004290,1.69e-14,71;UBERON:0009618,1.69e-14,71;UBERON:0003077,3.39e-14,72;UBERON:0007285,3.39e-14,72;UBERON:0007524,6.66e-14,73;UBERON:0001134,2.54e-13,62;UBERON:0002036,2.54e-13,62;UBERON:0003082,2.54e-13,62;UBERON:0002385,1.05e-12,64;UBERON:0001015,1.05e-12,64;UBERON:0000383,1.05e-12,64;UBERON:0007503,1.48e-12,78;UBERON:0001637,4.83e-12,42;UBERON:0003509,4.83e-12,42;UBERON:0004572,4.83e-12,42;UBERON:0002118,1.35e-11,5;UBERON:0000055,6.25e-11,68;UBERON:0000992,1.22e-10,13;UBERON:0004872,2.34e-10,83;UBERON:0007500,2.26e-09,59;UBERON:0001981,2.26e-09,59;UBERON:0004537,2.26e-09,59;UBERON:0006965,2.26e-09,59;UBERON:0001135,4.05e-09,15;UBERON:0002049,8.78e-09,78;UBERON:0007798,8.78e-09,78;UBERON:0005256,1.75e-08,122;UBERON:0000490,2.43e-08,148;UBERON:0004535,4.14e-08,109;UBERON:0003513,6.50e-08,7;UBERON:0003834,9.54e-08,5;UBERON:0001533,9.54e-08,5;UBERON:0001009,1.03e-07,112;UBERON:0001048,1.36e-07,160;UBERON:0000991,1.67e-07,21;UBERON:0009196,1.67e-07,21;UBERON:0009117,1.67e-07,21;UBERON:0005564,1.67e-07,21;UBERON:0002204,2.00e-07,167;UBERON:0001949,2.20e-07,3;UBERON:0004815,3.12e-07,3;UBERON:0002031,3.12e-07,3;UBERON:0004176,4.47e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,9.41255205032485,15.6700577286234,11.684961446198,13.1741855673437,0,0,0,0,0,0,0,0,0,0,0,0,4.59710612239464,5.4217065380085,1.84877005083394,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,1.22433556948361,0.641858054152187,1.27867425159808,0,0,0,6.96502172708602,5.10646702222026,10.5879782329248,0,0,0,3.63239701580021,2.57794345191295,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0.366403487860815,0,0,0,0,0,0.397227542439656,0,0,0,1.06748995729705,0.24666754841716,0,1.88594940897563,0,0,0,0,3.1216007683032,0,1.49448680551801,0,0.161872944368132,0.702254033511242,0.408308342509787,0,0,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86521706326594,9.27336810008838,2.86804595389004,0,0,0,0,0,0,6.25798129319264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.100528972411631,1.75918045801206,0,1.03993478527958,0,0,0,21.7993336119221,26.8531597294434,19.9766859846328,0,0,0,0,0,1.87467667973554,2.18376766658517,3.68615252830205,0,0.871901815541886,1.15014803749563,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,1.690605505112,0,0,0,0,0,0,0.542621605391443,0.823240336780769,1.30294473717494,0,3.95975936466715,0,0,0,0,0,0,0,0,0,3.18518874668674,4.52047909610843,4.29746311775749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,1.69630663182921,0.177561725313127,0.574890092096664,19.7316683089776,1.16210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,15.5051695258967,10.4009639365843,3.21367859688319,1.16004861950546,0.616194468458578,0.15350367472613,2.34322173223702,0.107420244868274,0.145016693914229,1.02271952899321,0,0,0,3.06270509987002,0,0.464845549297286,0,10.455559052409,21.8703841925023,15.9691809095107,3.47973196830029,6.11569923042936,0.858749320451947,0,0,0,0,0,1.59101623962968,38.4624833697623,0.179872457583315,0,0.117812402345686,14.9615036364254,0,48.8659809237218,0,14.6228093778771,15.8475220135133,0,0,0,2.75682671773062,4.64407282668854,0.438450885253763,0,0,0,0,0.845086807596724,0,0,0,0,0,0,0,0,2.59799704358883,2.68120910214315,5.44454924306613,0.188287601553558,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,32.0569070465969,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,4.78556634557405,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,1.94224303627274,0,0,0,0.063186579628488,0,0,0,0,0.627865836814451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78200456384186,0,0,0.881747022766871,0.426905989478705,0,0,0,0,0.576219191952599,3.10631338913581,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,5.0251111720377,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,4.24451623769098,0.828478110694391,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0.37494122388632,0,0,1.17632909849086,0,0,0.298509605773748,0,0,0,0,0,2.28840068396924,0,1.24349760466224,32.9716984476884,19.1156120596443,98.0570784516658,19.8736584801612,0.414706207840855,0.265841714557995,0.521745061811734,0.300515217994437,0,2.03435366602331,19.0941092162687,7.19650732184673,10.2087427173269,4.37905477568478,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0.0752103283492573,0,0,0,3.11166643269184,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07216164163037,2.21934020222135,0,0,0.236664001461131,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,8.11658204946091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,4.66194335052396,0,10.0126020391499,0,0,0,0,0.366724332548599,0,0,0,0.320568492303233 | |||
|short_description=p2@CSF3 | |||
}} |
Revision as of 15:04, 20 January 2014
Short description: | p2@CSF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSF3_5end |
Coexpression cluster: | C1432_mesenchymal_Smooth_Lymphatic_Preadipocyte_Sebocyte_CD14_anaplastic |
Association with transcript: | 10bp_to_ENST00000394149, NM_000759, NM_001178147, NM_172219, NM_172220, NR_033662_5end |
EntrezGene: | CSF3 |
HGNC: | 2438 |
UniProt: | P09919Q8N4W3Q6FH65A8MXR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.67e-17 | 32 |
muscle precursor cell | 1.11e-14 | 58 |
myoblast | 1.11e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-14 | 58 |
aortic smooth muscle cell | 1.59e-14 | 10 |
embryonic cell | 8.43e-13 | 250 |
smooth muscle cell | 1.18e-11 | 43 |
smooth muscle myoblast | 1.18e-11 | 43 |
muscle cell | 1.82e-11 | 55 |
electrically responsive cell | 8.07e-10 | 61 |
electrically active cell | 8.07e-10 | 61 |
protein secreting cell | 3.12e-09 | 6 |
epithelial cell of tracheobronchial tree | 3.13e-08 | 9 |
epithelial cell of lower respiratory tract | 3.13e-08 | 9 |
smooth muscle cell of the subclavian artery | 9.54e-08 | 5 |
acinar cell | 1.91e-07 | 5 |
gingival epithelial cell | 2.20e-07 | 3 |
mesodermal cell | 2.67e-07 | 121 |
respiratory epithelial cell | 2.68e-07 | 13 |
bronchial epithelial cell | 3.12e-07 | 3 |
duct epithelial cell | 3.63e-07 | 3 |
branched duct epithelial cell | 3.63e-07 | 3 |
tracheal epithelial cell | 3.63e-07 | 3 |
tracheoblast | 3.63e-07 | 3 |
epithelial cell of Malassez | 6.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.20e-10 | 14 |