FFCP PHASE1:Hg19::chr17:31618260..31618271,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr17:31618260..31618271,+ | |||
|id=chr17:31618260..31618271,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.70e-32;5!CL:0002321;1.34e-11;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.57e-24!10;DOID:3095!4.26e-11!22;DOID:2994!4.26e-11!22;DOID:169!1.67e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:171;2.85e-98;10!DOID:3095;3.09e-45;22!DOID:2994;3.09e-45;22!DOID:169;2.72e-27;6!DOID:3193;3.81e-21;2!DOID:962;3.81e-21;2!DOID:1192;1.40e-14;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.85e-98,10;DOID:3095,3.09e-45,22;DOID:2994,3.09e-45,22;DOID:169,2.72e-27,6;DOID:3193,3.81e-21,2;DOID:962,3.81e-21,2;DOID:1192,1.40e-14,3;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0006331!1.32e-13!3;UBERON:0002020!1.66e-12!34;UBERON:0003528!1.66e-12!34;UBERON:0002298!3.78e-11!8;UBERON:0000998!5.05e-11!1;UBERON:0006868!5.05e-11!1;UBERON:0002346!5.86e-11!90;UBERON:0002038!7.46e-11!1;UBERON:0009661!7.46e-11!1;UBERON:0006834!1.21e-10!1;UBERON:0002022!1.61e-10!1;UBERON:0002420!3.81e-10!9;UBERON:0007245!3.81e-10!9;UBERON:0010009!3.81e-10!9;UBERON:0010011!3.81e-10!9;UBERON:0000454!3.81e-10!9;UBERON:0000073!4.05e-10!94;UBERON:0001016!4.05e-10!94;UBERON:0002308!4.32e-10!9;UBERON:0000125!4.32e-10!9;UBERON:0002791!1.40e-09!33;UBERON:0000955!1.73e-09!69;UBERON:0006238!1.73e-09!69;UBERON:0001049!2.10e-09!57;UBERON:0005068!2.10e-09!57;UBERON:0006241!2.10e-09!57;UBERON:0007135!2.10e-09!57;UBERON:0001893!2.71e-09!34;UBERON:0002616!4.67e-09!59;UBERON:0000013!7.72e-09!5;UBERON:0002410!7.72e-09!5;UBERON:0000924!2.32e-08!173;UBERON:0006601!2.32e-08!173;UBERON:0001017!7.89e-08!82;UBERON:0002780!1.14e-07!41;UBERON:0001890!1.14e-07!41;UBERON:0006240!1.14e-07!41;UBERON:0003080!1.76e-07!42;UBERON:0005743!2.03e-07!86;UBERON:0001950!2.27e-07!20;UBERON:0001869!5.01e-07!32;UBERON:0002619!9.67e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.04e-88;4!UBERON:0000923;1.04e-88;4!UBERON:0010316;1.04e-88;4!UBERON:0005291;1.04e-88;4!UBERON:0002050;3.21e-71;5!UBERON:0005423;3.21e-71;5!UBERON:0000013;1.70e-32;5!UBERON:0002410;1.70e-32;5!UBERON:0003714;3.81e-21;2!UBERON:0000010;1.35e-18;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.70e-32,5;UBERON:0002410,1.70e-32,5;UBERON:0003714,3.81e-21,2;UBERON:0000010,1.35e-18,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04445724412665,0,1.69732529954025,9.56587140457573,7.43614585554013,8.37967376959866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:31618260..31618271,+ | |||
}} |
Revision as of 14:40, 20 January 2014
Short description: | p@chr17:31618260..31618271, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:31618260..31618271, + |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.70e-32 | 5 |
autonomic nervous system | 1.70e-32 | 5 |
neural tissue | 3.81e-21 | 2 |
peripheral nervous system | 1.35e-18 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.85e-98 | 10 |
germ cell and embryonal cancer | 3.09e-45 | 22 |
germ cell cancer | 3.09e-45 | 22 |
neuroendocrine tumor | 2.72e-27 | 6 |
peripheral nerve sheath neoplasm | 3.81e-21 | 2 |
neurofibroma | 3.81e-21 | 2 |
peripheral nervous system neoplasm | 1.40e-14 | 3 |
cell type cancer | 1.55e-07 | 143 |