FFCP PHASE1:Hg19::chr17:6918354..6918401,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124944 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28737 | |||
|TSSclassifier=strong | |||
|UniProt=F8W1H0 | |||
|association_with_transcript=0bp_to_ENST00000552775_5end | |||
|description=CAGE_peak_3_at_C17orf49_5end | |||
|id=chr17:6918354..6918401,+ | |||
|ontology_enrichment_celltype=CL:0002371!9.32e-26!591;CL:0000144!4.52e-20!625;CL:0000055!2.10e-19!180;CL:0000222!2.79e-18!119;CL:0000183!9.34e-16!59;CL:0000048!1.13e-15!430;CL:0000723!6.83e-15!436;CL:0000680!2.64e-14!57;CL:0000056!2.64e-14!57;CL:0000355!2.64e-14!57;CL:0000034!1.27e-13!444;CL:0000187!2.70e-13!54;CL:0000393!1.88e-12!60;CL:0000211!1.88e-12!60;CL:0000192!1.30e-11!42;CL:0000514!1.30e-11!42;CL:0000003!1.36e-11!722;CL:0000012!2.68e-11!682;CL:0000548!3.46e-11!679;CL:0000004!3.46e-11!679;CL:0000255!3.46e-11!679;CL:0002078!2.80e-10!44;CL:0000115!1.22e-09!35;CL:0000057!3.85e-08!75;CL:0000359!8.62e-08!32;CL:0002139!4.41e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000192;9.13e-09;43!CL:0000115;2.65e-08;36!CL:0000187;5.66e-08;55!CL:0002078;8.85e-08;45!CL:0000359;2.04e-07;32!CL:0002139;4.22e-07;24!CL:0000393;5.82e-07;61!CL:0000211;5.82e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.42e-19,121;CL:0000048,8.97e-17,427;CL:0000723,5.83e-16,433;CL:0000034,1.23e-14,441;CL:0000680,1.63e-14,58;CL:0000056,1.63e-14,58;CL:0000355,1.63e-14,58;CL:0000187,1.68e-13,55;CL:0000393,1.17e-12,61;CL:0000211,1.17e-12,61;CL:0000192,8.20e-12,43;CL:0000514,8.20e-12,43;CL:0002078,1.26e-10,45;CL:0000115,5.38e-10,36;CL:0000057,4.62e-08,76;CL:0000359,8.62e-08,32;CL:0002139,4.41e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;9.13e-09;43!CL:0000355;2.72e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.42e-15!83;UBERON:0002329!9.42e-15!83;UBERON:0003077!9.42e-15!83;UBERON:0003059!9.42e-15!83;UBERON:0007282!9.42e-15!83;UBERON:0009618!9.42e-15!83;UBERON:0007285!9.42e-15!83;UBERON:0004290!2.01e-13!70;UBERON:0000486!3.16e-13!82;UBERON:0001134!5.59e-12!61;UBERON:0002036!5.59e-12!61;UBERON:0003082!5.59e-12!61;UBERON:0002049!7.47e-12!79;UBERON:0007798!7.47e-12!79;UBERON:0000055!8.62e-12!69;UBERON:0004535!9.93e-11!110;UBERON:0002385!1.20e-10!63;UBERON:0001015!1.20e-10!63;UBERON:0000383!1.20e-10!63;UBERON:0005256!1.22e-10!143;UBERON:0001009!1.89e-09!113;UBERON:0004872!8.44e-09!84;UBERON:0001981!2.01e-08!60;UBERON:0007500!2.01e-08!60;UBERON:0004537!2.01e-08!60;UBERON:0006965!2.01e-08!60;UBERON:0003914!1.31e-07!118;UBERON:0001637!3.53e-07!42;UBERON:0003509!3.53e-07!42;UBERON:0004572!3.53e-07!42;UBERON:0000490!7.00e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;4.59e-07;65!UBERON:0003914;8.64e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.76e-16,78;UBERON:0002329,1.24e-13,71;UBERON:0003059,1.24e-13,71;UBERON:0007282,1.24e-13,71;UBERON:0004290,1.24e-13,71;UBERON:0009618,1.24e-13,71;UBERON:0007524,1.40e-13,73;UBERON:0003077,1.74e-13,72;UBERON:0007285,1.74e-13,72;UBERON:0000486,1.95e-13,83;UBERON:0001134,3.47e-12,62;UBERON:0002036,3.47e-12,62;UBERON:0003082,3.47e-12,62;UBERON:0002049,5.67e-12,78;UBERON:0007798,5.67e-12,78;UBERON:0000055,6.27e-12,68;UBERON:0002385,7.50e-11,64;UBERON:0001015,7.50e-11,64;UBERON:0000383,7.50e-11,64;UBERON:0004535,8.39e-11,109;UBERON:0001009,1.64e-09,112;UBERON:0004872,7.03e-09,83;UBERON:0007500,1.57e-08,59;UBERON:0001981,1.57e-08,59;UBERON:0004537,1.57e-08,59;UBERON:0006965,1.57e-08,59;UBERON:0000490,3.17e-08,148;UBERON:0003104,9.11e-08,160;UBERON:0009142,9.11e-08,160;UBERON:0005256,1.03e-07,122;UBERON:0003914,1.91e-07,117;UBERON:0001637,3.53e-07,42;UBERON:0003509,3.53e-07,42;UBERON:0004572,3.53e-07,42 | |||
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| |||
|short_description=p3@C17orf49 | |||
}} |
Revision as of 13:24, 20 January 2014
Short description: | p3@C17orf49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C17orf49_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000552775_5end |
EntrezGene: | C17orf49 |
HGNC: | 28737 |
UniProt: | F8W1H0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.42e-19 | 121 |
multi fate stem cell | 8.97e-17 | 427 |
somatic stem cell | 5.83e-16 | 433 |
stem cell | 1.23e-14 | 441 |
muscle precursor cell | 1.63e-14 | 58 |
myoblast | 1.63e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-14 | 58 |
muscle cell | 1.68e-13 | 55 |
electrically responsive cell | 1.17e-12 | 61 |
electrically active cell | 1.17e-12 | 61 |
smooth muscle cell | 8.20e-12 | 43 |
smooth muscle myoblast | 8.20e-12 | 43 |
meso-epithelial cell | 1.26e-10 | 45 |
endothelial cell | 5.38e-10 | 36 |
fibroblast | 4.62e-08 | 76 |
vascular associated smooth muscle cell | 8.62e-08 | 32 |
endothelial cell of vascular tree | 4.41e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.76e-16 | 78 |
somite | 1.24e-13 | 71 |
presomitic mesoderm | 1.24e-13 | 71 |
presumptive segmental plate | 1.24e-13 | 71 |
dermomyotome | 1.24e-13 | 71 |
trunk paraxial mesoderm | 1.24e-13 | 71 |
dense mesenchyme tissue | 1.40e-13 | 73 |
paraxial mesoderm | 1.74e-13 | 72 |
presumptive paraxial mesoderm | 1.74e-13 | 72 |
multilaminar epithelium | 1.95e-13 | 83 |
skeletal muscle tissue | 3.47e-12 | 62 |
striated muscle tissue | 3.47e-12 | 62 |
myotome | 3.47e-12 | 62 |
vasculature | 5.67e-12 | 78 |
vascular system | 5.67e-12 | 78 |
vessel | 6.27e-12 | 68 |
muscle tissue | 7.50e-11 | 64 |
musculature | 7.50e-11 | 64 |
musculature of body | 7.50e-11 | 64 |
cardiovascular system | 8.39e-11 | 109 |
circulatory system | 1.64e-09 | 112 |
splanchnic layer of lateral plate mesoderm | 7.03e-09 | 83 |
epithelial tube open at both ends | 1.57e-08 | 59 |
blood vessel | 1.57e-08 | 59 |
blood vasculature | 1.57e-08 | 59 |
vascular cord | 1.57e-08 | 59 |
unilaminar epithelium | 3.17e-08 | 148 |
mesenchyme | 9.11e-08 | 160 |
entire embryonic mesenchyme | 9.11e-08 | 160 |
trunk mesenchyme | 1.03e-07 | 122 |
epithelial tube | 1.91e-07 | 117 |
artery | 3.53e-07 | 42 |
arterial blood vessel | 3.53e-07 | 42 |
arterial system | 3.53e-07 | 42 |