FFCP PHASE1:Hg19::chr17:6555065..6555097,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34494 | |||
|TSSclassifier=strong | |||
|UniProt=D3DTM5,A8MU93 | |||
|association_with_transcript=6bp_to_ENST00000542475,NM_001105520,uc010clp.1_5end | |||
|description=CAGE_peak_1_at_C17orf100_5end | |||
|id=chr17:6555065..6555097,+ | |||
|ontology_enrichment_celltype=CL:0000223!2.25e-09!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,7.11e-10,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.28e-17!365;UBERON:0000481!9.39e-17!347;UBERON:0000468!6.00e-11!659;UBERON:0004119!1.35e-09!169;UBERON:0000925!1.35e-09!169;UBERON:0006595!1.35e-09!169;UBERON:0000922!2.41e-09!612;UBERON:0005177!2.68e-09!107;UBERON:0002050!4.36e-09!605;UBERON:0005423!4.36e-09!605;UBERON:0001007!4.65e-09!155;UBERON:0001555!4.65e-09!155;UBERON:0007026!4.65e-09!155;UBERON:0000923!6.25e-09!604;UBERON:0005291!6.25e-09!604;UBERON:0006598!6.25e-09!604;UBERON:0002532!6.25e-09!604;UBERON:0000466!6.78e-09!126;UBERON:0000062!2.32e-08!511;UBERON:0000480!2.35e-08!626;UBERON:0000467!2.77e-08!625;UBERON:0002100!3.81e-08!216;UBERON:0003104!4.87e-08!238;UBERON:0009142!4.87e-08!238;UBERON:0004921!7.31e-08!129;UBERON:0004185!7.31e-08!129;UBERON:0000119!9.10e-08!312;UBERON:0000483!1.15e-07!309;UBERON:0004111!5.15e-07!241;UBERON:0009569!5.44e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.87e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.31e-11,223;UBERON:0005177,3.80e-09,101;UBERON:0004119,5.60e-09,160;UBERON:0000925,5.60e-09,160;UBERON:0006595,5.60e-09,160;UBERON:0001007,1.33e-08,145;UBERON:0001555,1.33e-08,145;UBERON:0007026,1.33e-08,145;UBERON:0000483,5.09e-08,306;UBERON:0003104,6.07e-08,160;UBERON:0009142,6.07e-08,160;UBERON:0000119,7.42e-08,309;UBERON:0009569,1.03e-07,112;UBERON:0002100,1.83e-07,199;UBERON:0004921,3.10e-07,118;UBERON:0005911,4.13e-07,82;UBERON:0002417,4.52e-07,60;UBERON:0000916,4.52e-07,60 | |||
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| |||
|short_description=p1@C17orf100 | |||
}} |
Revision as of 13:22, 20 January 2014
Short description: | p1@C17orf100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C17orf100_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000542475, NM_001105520, uc010clp.1_5end |
EntrezGene: | C17orf100 |
HGNC: | 34494 |
UniProt: | D3DTM5A8MU93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 7.11e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.31e-11 | 223 |
trunk region element | 3.80e-09 | 101 |
endoderm-derived structure | 5.60e-09 | 160 |
endoderm | 5.60e-09 | 160 |
presumptive endoderm | 5.60e-09 | 160 |
digestive system | 1.33e-08 | 145 |
digestive tract | 1.33e-08 | 145 |
primitive gut | 1.33e-08 | 145 |
epithelium | 5.09e-08 | 306 |
mesenchyme | 6.07e-08 | 160 |
entire embryonic mesenchyme | 6.07e-08 | 160 |
cell layer | 7.42e-08 | 309 |
subdivision of trunk | 1.03e-07 | 112 |
trunk | 1.83e-07 | 199 |
subdivision of digestive tract | 3.10e-07 | 118 |
endo-epithelium | 4.13e-07 | 82 |
abdominal segment of trunk | 4.52e-07 | 60 |
abdomen | 4.52e-07 | 60 |