FFCP PHASE1:Hg19::chr17:4643135..4643144,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58191 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H2A7 | |||
|association_with_transcript=78bp_to_ENST00000293778,NM_001100812,NM_022059,uc002fyr.3,uc002fys.3_5end | |||
|description=CAGE_peak_13_at_CXCL16_5end | |||
|id=chr17:4643135..4643144,- | |||
|ontology_enrichment_celltype=CL:0000766!3.34e-34!76;CL:0002057!1.12e-30!42;CL:0000557!1.86e-29!71;CL:0000860!1.63e-27!45;CL:0002009!3.37e-27!65;CL:0000839!6.23e-27!70;CL:0002194!2.24e-25!63;CL:0000576!2.24e-25!63;CL:0000040!2.24e-25!63;CL:0000559!2.24e-25!63;CL:0000763!2.57e-21!112;CL:0000049!2.57e-21!112;CL:0000738!2.14e-18!140;CL:0002031!6.97e-12!124;CL:0000037!1.14e-10!172;CL:0000566!1.14e-10!172;CL:0002032!2.45e-10!165;CL:0000837!2.45e-10!165;CL:0000988!5.76e-10!182;CL:0002087!8.85e-10!119;CL:0000094!2.17e-07!8;CL:0000453!9.72e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-74;33!CL:0002057;1.13e-74;33!CL:0000473;1.44e-57;39!CL:0000234;1.44e-57;39!CL:0000576;8.55e-45;48!CL:0000766;1.38e-37;69!CL:0000453;2.33e-22;5!CL:0000094;3.10e-20;8!CL:0000763;2.55e-19;100!CL:0000775;1.03e-14;3!CL:0000081;1.55e-14;11!CL:0000875;2.14e-13;3!CL:0002396;2.14e-13;3!CL:0000738;3.09e-13;136!CL:0000990;2.66e-12;8!CL:0002087;3.17e-12;104!CL:0000771;1.79e-10;2!CL:0000451;5.23e-10;10!CL:0001014;6.31e-10;2!CL:0001016;6.31e-10;2!CL:0000988;7.95e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.72e-84,42;CL:0002057,1.72e-84,42;CL:0000473,3.67e-78,48;CL:0000234,3.67e-78,48;CL:0000766,4.34e-73,72;CL:0002009,1.24e-67,61;CL:0000763,5.53e-62,108;CL:0000049,5.53e-62,108;CL:0002194,4.27e-61,59;CL:0000576,4.27e-61,59;CL:0000040,4.27e-61,59;CL:0000559,4.27e-61,59;CL:0000557,5.28e-61,67;CL:0000839,5.81e-54,66;CL:0000738,3.29e-50,136;CL:0002032,3.97e-41,161;CL:0000837,3.97e-41,161;CL:0000037,4.58e-39,168;CL:0000988,1.19e-36,177;CL:0002031,3.22e-33,120;CL:0002087,2.71e-30,115;CL:0000453,1.27e-22,5;CL:0000094,2.17e-20,8;CL:0000134,5.28e-15,354;CL:0000775,1.08e-14,3;CL:0000081,1.20e-14,11;CL:0002320,1.54e-14,361;CL:0000875,2.66e-13,3;CL:0002396,2.66e-13,3;CL:0000219,6.64e-13,386;CL:0000990,1.92e-12,8;CL:0000048,6.69e-11,427;CL:0000723,1.26e-10,433;CL:0000771,1.76e-10,2;CL:0000034,2.88e-10,441;CL:0000451,4.02e-10,10;CL:0001014,5.19e-10,2;CL:0001016,5.19e-10,2;CL:0002393,1.25e-07,9;CL:0002397,1.25e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.20e-62;42!CL:0000049;6.67e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.27e-25!115;UBERON:0002371!9.05e-25!80;UBERON:0001474!2.27e-22!86;UBERON:0002390!4.95e-21!102;UBERON:0003061!4.95e-21!102;UBERON:0002193!2.12e-20!112;UBERON:0004765!5.96e-17!101;UBERON:0001434!5.96e-17!101;UBERON:0000062!4.57e-10!511;UBERON:0003081!1.58e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.38e-53,76;UBERON:0001474,1.27e-48,82;UBERON:0004765,1.10e-43,90;UBERON:0002405,4.74e-42,93;UBERON:0002390,1.51e-39,98;UBERON:0003061,1.51e-39,98;UBERON:0001434,1.29e-38,100;UBERON:0002193,3.15e-35,108;UBERON:0002204,3.23e-20,167;UBERON:0003081,2.47e-15,203;UBERON:0002384,6.60e-14,371;UBERON:0000926,2.51e-07,315;UBERON:0004120,2.51e-07,315;UBERON:0006603,2.51e-07,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,1.96682138424452,0,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0.223915474239924,0.32389366601898,0.257575567634187,3.48955773070955,1.51150377475524,1.69808842831471,2.78914844286822,2.46700732813095,1.54853185447552,1.1507695692886,1.0246428261164,1.18241114944293,4.48169384957604,1.29096936716765,1.35426486594342,4.89430082810772,2.72906150057846,1.12361742222542,4.89734227793444,1.28371610830437,3.19668562899521,1.64925650093358,1.99463657621632,1.27867425159808,2.32167390902867,0.56738522469114,1.24564449799115,2.26123798731069,0,0.434377689410233,2.42159801053347,0.736555271975129,1.26584954976354,1.26753171787165,0,0,0.22465726229299,0.150176892841506,0.32145117339416,2.85012743741249,1.39241674039363,1.0959849225878,0,0,0,0,0.400395987036012,1.72425731986345,0,0,0,0,0.764546456250458,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.392937226493138,0.364295288292542,0,0,0,0.26591592103773,0.715471872916026,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,6.58902087180316,7.75560528296651,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0.738155454624648,0,0,0,0,1.96565443335525,0.590789906681404,0,0.368965315629341,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0.702012795417713,0.594524649154913,0,0,0.425325291727159,0,0,0,0.492663237895943,0.176096868026452,0.414656231081544,0.144119953416961,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49404214368309,8.97484377612075,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.431428401637234,0.320182673410333,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0.902399225814824,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0,0,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.586032717087576,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0.251932747854276,0.409074730008619,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0.341826167541004,0.23056390438806,0,0.108647371922008,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0.189559738885464,0.150323419414493,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0.34823682632161,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0,0.235694034616795,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.157566364614447,0,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0,0,0,11.0237206860235,1.5476039091159,0,0.335434687599266,0.157611414598396,0.314727528809989,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0.439656701034247,3.97520666736664,0,0,0.342173675768659,0,0.640724475406168,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0,0,0,0,0.926404341482917,0.219284049578707,0,0,0.168942440653073,0,0.690860683462397,0,0,1.94860308839388,5.84605297378798,6.21548498172208,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,1.02209942111676,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0.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| |||
|short_description=p13@CXCL16 | |||
}} |
Revision as of 13:14, 20 January 2014
Short description: | p13@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CXCL16_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_ENST00000293778, NM_001100812, NM_022059, uc002fyr.3, uc002fys.3_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | Q9H2A7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.38e-53 | 76 |
bone element | 1.27e-48 | 82 |
skeletal element | 1.10e-43 | 90 |
immune system | 4.74e-42 | 93 |
hematopoietic system | 1.51e-39 | 98 |
blood island | 1.51e-39 | 98 |
skeletal system | 1.29e-38 | 100 |
hemolymphoid system | 3.15e-35 | 108 |
musculoskeletal system | 3.23e-20 | 167 |
lateral plate mesoderm | 2.47e-15 | 203 |
connective tissue | 6.60e-14 | 371 |
mesoderm | 2.51e-07 | 315 |
mesoderm-derived structure | 2.51e-07 | 315 |
presumptive mesoderm | 2.51e-07 | 315 |