FFCP PHASE1:Hg19::chr17:3796266..3796304,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84254 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1469 | |||
|TSSclassifier=strong | |||
|UniProt=F8W9H1,Q8N5S9 | |||
|association_with_transcript=32bp_to_ENST00000381771,NM_032294,NM_172207,uc002fwu.2,uc002fwv.2_5end | |||
|description=CAGE_peak_2_at_CAMKK1_5end | |||
|id=chr17:3796266..3796304,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.58e-19!115;UBERON:0003080!2.91e-13!42;UBERON:0002780!5.06e-13!41;UBERON:0001890!5.06e-13!41;UBERON:0006240!5.06e-13!41;UBERON:0000955!1.31e-12!69;UBERON:0006238!1.31e-12!69;UBERON:0001049!1.53e-11!57;UBERON:0005068!1.53e-11!57;UBERON:0006241!1.53e-11!57;UBERON:0007135!1.53e-11!57;UBERON:0005743!1.95e-11!86;UBERON:0001017!2.11e-11!82;UBERON:0000073!3.12e-11!94;UBERON:0001016!3.12e-11!94;UBERON:0001869!5.19e-11!32;UBERON:0001893!1.07e-10!34;UBERON:0002616!1.68e-10!59;UBERON:0002020!3.68e-10!34;UBERON:0003528!3.68e-10!34;UBERON:0002791!4.09e-10!33;UBERON:0003056!7.41e-10!61;UBERON:0002619!1.65e-09!22;UBERON:0001950!4.25e-09!20;UBERON:0003075!1.04e-08!86;UBERON:0007284!1.04e-08!86;UBERON:0002346!1.66e-08!90;UBERON:0000956!2.27e-08!25;UBERON:0000203!2.27e-08!25;UBERON:0000033!7.88e-08!123;UBERON:0000153!1.87e-07!129;UBERON:0007811!1.87e-07!129;UBERON:0000480!2.39e-07!626;UBERON:0000467!2.74e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.13e-11;32!UBERON:0002619;5.81e-11;22!UBERON:0001893;7.43e-11;34!UBERON:0002780;8.10e-11;41!UBERON:0001890;8.10e-11;41!UBERON:0001950;1.13e-10;20!UBERON:0002791;1.73e-10;32!UBERON:0003528;6.16e-10;34!UBERON:0002020;6.16e-10;34!UBERON:0000956;2.85e-09;25!UBERON:0000203;2.85e-09;25!UBERON:0000073;4.69e-08;53!UBERON:0002616;4.69e-08;53!UBERON:0000955;2.99e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.64e-19,114;UBERON:0002780,2.68e-14,41;UBERON:0001890,2.68e-14,41;UBERON:0003080,2.68e-14,41;UBERON:0006240,2.68e-14,41;UBERON:0000955,9.51e-14,68;UBERON:0006238,9.51e-14,68;UBERON:0000073,1.45e-13,53;UBERON:0002616,1.45e-13,53;UBERON:0001869,2.31e-12,32;UBERON:0001893,5.24e-12,34;UBERON:0001049,7.23e-12,56;UBERON:0005068,7.23e-12,56;UBERON:0006241,7.23e-12,56;UBERON:0007135,7.23e-12,56;UBERON:0001017,9.01e-12,81;UBERON:0001016,1.33e-11,89;UBERON:0002791,1.93e-11,32;UBERON:0003528,2.18e-11,34;UBERON:0002020,2.18e-11,34;UBERON:0002619,4.08e-11,22;UBERON:0001950,1.21e-10,20;UBERON:0003056,3.48e-10,61;UBERON:0000956,2.68e-09,25;UBERON:0000203,2.68e-09,25;UBERON:0003075,1.19e-08,82;UBERON:0007284,1.19e-08,82;UBERON:0002346,1.37e-08,86;UBERON:0010314,5.99e-07,132 | |||
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| |||
|short_description=p2@CAMKK1 | |||
}} |
Revision as of 13:10, 20 January 2014
Short description: | p2@CAMKK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAMKK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000381771, NM_032294, NM_172207, uc002fwu.2, uc002fwv.2_5end |
EntrezGene: | CAMKK1 |
HGNC: | 1469 |
UniProt: | F8W9H1Q8N5S9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.64e-19 | 114 |
regional part of forebrain | 2.68e-14 | 41 |
forebrain | 2.68e-14 | 41 |
anterior neural tube | 2.68e-14 | 41 |
future forebrain | 2.68e-14 | 41 |
brain | 9.51e-14 | 68 |
future brain | 9.51e-14 | 68 |
regional part of nervous system | 1.45e-13 | 53 |
regional part of brain | 1.45e-13 | 53 |
cerebral hemisphere | 2.31e-12 | 32 |
telencephalon | 5.24e-12 | 34 |
neural tube | 7.23e-12 | 56 |
neural rod | 7.23e-12 | 56 |
future spinal cord | 7.23e-12 | 56 |
neural keel | 7.23e-12 | 56 |
central nervous system | 9.01e-12 | 81 |
nervous system | 1.33e-11 | 89 |
regional part of telencephalon | 1.93e-11 | 32 |
brain grey matter | 2.18e-11 | 34 |
gray matter | 2.18e-11 | 34 |
regional part of cerebral cortex | 4.08e-11 | 22 |
neocortex | 1.21e-10 | 20 |
pre-chordal neural plate | 3.48e-10 | 61 |
cerebral cortex | 2.68e-09 | 25 |
pallium | 2.68e-09 | 25 |
neural plate | 1.19e-08 | 82 |
presumptive neural plate | 1.19e-08 | 82 |
neurectoderm | 1.37e-08 | 86 |
structure with developmental contribution from neural crest | 5.99e-07 | 132 |