FFCP PHASE1:Hg19::chr17:2117600..2117615,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:2117600..2117615,- | |||
|id=chr17:2117600..2117615,- | |||
|ontology_enrichment_celltype=CL:0000055!5.71e-34!180;CL:0000183!2.29e-23!59;CL:0000680!9.15e-22!57;CL:0000056!9.15e-22!57;CL:0000355!9.15e-22!57;CL:0000187!3.85e-21!54;CL:0000057!1.23e-20!75;CL:0000393!1.12e-17!60;CL:0000211!1.12e-17!60;CL:0000192!5.81e-17!42;CL:0000514!5.81e-17!42;CL:0000359!1.13e-11!32;CL:0000222!2.60e-10!119;CL:0002620!5.13e-09!23;CL:0002494!1.56e-08!16 | |||
|ontology_enrichment_celltype_v019=CL:0000187;4.04e-12;55!CL:0002620;5.70e-11;23!CL:0000393;1.09e-10;61!CL:0000211;1.09e-10;61!CL:0002494;1.36e-10;16!CL:0000192;1.45e-10;43!CL:0000359;1.13e-09;32!CL:0002548;1.20e-07;6!CL:0000057;3.10e-07;73!CL:0000188;5.77e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.23e-21,55;CL:0000680,6.33e-21,58;CL:0000056,6.33e-21,58;CL:0000355,6.33e-21,58;CL:0000057,3.37e-19,76;CL:0000393,3.64e-18,61;CL:0000211,3.64e-18,61;CL:0000192,4.45e-15,43;CL:0000514,4.45e-15,43;CL:0002620,1.91e-11,23;CL:0000048,6.75e-11,427;CL:0002494,1.93e-10,16;CL:0000723,2.77e-10,433;CL:0000359,1.22e-09,32;CL:0000034,1.67e-09,441;CL:0000222,8.58e-09,121;CL:0002548,1.73e-07,6;CL:0000188,4.39e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;2.81e-11;58!CL:0000514;1.45e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.95e-21!63;UBERON:0001015!3.95e-21!63;UBERON:0000383!3.95e-21!63;UBERON:0001134!1.93e-20!61;UBERON:0002036!1.93e-20!61;UBERON:0003082!1.93e-20!61;UBERON:0004290!2.11e-18!70;UBERON:0000914!4.53e-17!83;UBERON:0002329!4.53e-17!83;UBERON:0003077!4.53e-17!83;UBERON:0003059!4.53e-17!83;UBERON:0007282!4.53e-17!83;UBERON:0009618!4.53e-17!83;UBERON:0007285!4.53e-17!83;UBERON:0000486!8.50e-14!82;UBERON:0000475!5.88e-12!365;UBERON:0000119!5.45e-11!312;UBERON:0001637!1.80e-10!42;UBERON:0003509!1.80e-10!42;UBERON:0004572!1.80e-10!42;UBERON:0001009!2.72e-10!113;UBERON:0004872!5.10e-10!84;UBERON:0000483!5.86e-10!309;UBERON:0007100!7.19e-10!27;UBERON:0004535!7.50e-10!110;UBERON:0005256!7.51e-10!143;UBERON:0000481!8.16e-10!347;UBERON:0002049!9.39e-10!79;UBERON:0007798!9.39e-10!79;UBERON:0000948!1.48e-09!24;UBERON:0005498!1.48e-09!24;UBERON:0004140!1.48e-09!24;UBERON:0009881!1.48e-09!24;UBERON:0004141!1.48e-09!24;UBERON:0003084!1.48e-09!24;UBERON:0007005!1.48e-09!24;UBERON:0004139!1.48e-09!24;UBERON:0004291!1.48e-09!24;UBERON:0000490!5.02e-09!138;UBERON:0004573!7.02e-09!33;UBERON:0004571!7.02e-09!33;UBERON:0000477!5.79e-08!286;UBERON:0002200!1.07e-07!11;UBERON:0006876!1.07e-07!11;UBERON:0001135!1.99e-07!15;UBERON:0000468!2.38e-07!659;UBERON:0003914!2.61e-07!118;UBERON:0001981!6.94e-07!60;UBERON:0007500!6.94e-07!60;UBERON:0004537!6.94e-07!60;UBERON:0006965!6.94e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;3.02e-10;22!UBERON:0007100;1.74e-09;25!UBERON:0006876;2.57e-09;11!UBERON:0002385;3.97e-09;31!UBERON:0001015;3.97e-09;31!UBERON:0000383;3.97e-09;31!UBERON:0004573;5.41e-08;33!UBERON:0004571;5.41e-08;33!UBERON:0002203;7.96e-07;6!UBERON:0001768;7.96e-07;6!UBERON:0002200;7.96e-07;6!UBERON:0001637;8.69e-07;42!UBERON:0003509;8.69e-07;42!UBERON:0004572;8.69e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,1.01e-19,64;UBERON:0001015,1.01e-19,64;UBERON:0000383,1.01e-19,64;UBERON:0001134,1.13e-19,62;UBERON:0002036,1.13e-19,62;UBERON:0003082,1.13e-19,62;UBERON:0002329,2.76e-17,71;UBERON:0003059,2.76e-17,71;UBERON:0007282,2.76e-17,71;UBERON:0004290,2.76e-17,71;UBERON:0009618,2.76e-17,71;UBERON:0007503,4.35e-17,78;UBERON:0003077,7.53e-17,72;UBERON:0007285,7.53e-17,72;UBERON:0007524,2.00e-16,73;UBERON:0005256,5.03e-14,122;UBERON:0000486,1.57e-13,83;UBERON:0003104,2.03e-13,160;UBERON:0009142,2.03e-13,160;UBERON:0000948,1.02e-11,24;UBERON:0005498,1.02e-11,24;UBERON:0004140,1.02e-11,24;UBERON:0009881,1.02e-11,24;UBERON:0004141,1.02e-11,24;UBERON:0003084,1.02e-11,24;UBERON:0007005,1.02e-11,24;UBERON:0004139,1.02e-11,24;UBERON:0004291,1.02e-11,24;UBERON:0004535,6.12e-11,109;UBERON:0007100,7.66e-11,27;UBERON:0001009,7.83e-11,112;UBERON:0000926,6.09e-10,315;UBERON:0004120,6.09e-10,315;UBERON:0006603,6.09e-10,315;UBERON:0006876,1.66e-09,11;UBERON:0002049,2.55e-09,78;UBERON:0007798,2.55e-09,78;UBERON:0000490,4.44e-09,148;UBERON:0001637,7.83e-09,42;UBERON:0003509,7.83e-09,42;UBERON:0004572,7.83e-09,42;UBERON:0004872,9.11e-09,83;UBERON:0004573,2.19e-08,33;UBERON:0004571,2.19e-08,33;UBERON:0003914,2.84e-08,117;UBERON:0002100,7.71e-08,199;UBERON:0000119,1.84e-07,309;UBERON:0002203,4.36e-07,6;UBERON:0001768,4.36e-07,6;UBERON:0002200,4.36e-07,6 | |||
|phase1_expression=1.63510541343501,0.428201047781966,1.9733616573436,0,2.68176656656373,0,0,3.15859936713415,0.261185628199839,2.7030733015166,1.39560233594486,0,0,2.72285976512103,4.97096063591874,2.01697543935533,4.21886169616784,2.92124036154949,2.43966399395253,1.96993692922861,1.42800483870977,2.5076377718247,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0.199463657621632,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4987352478491,3.58015173161885,1.44575660953827,3.00802746381534,1.73815822752988,0,0,1.89069634328136,1.77383517970051,3.16205228495254,0.785874452986276,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,1.13061588384802,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,2.27934920996244,2.51577443545116,5.73673241497627,3.54668382198357,2.24271040056923,18.1473292740498,5.92002116201184,2.17847724779836,4.31074150623002,5.23078089963068,46.315372859349,27.6564443750399,4.68642863667593,1.87296046098192,0,1.19558944441441,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0.368502951935304,1.85986406116378,0,0.494533858557114,0.910161361938026,4.31170885089743,0.336672227908132,0.125118519871964,0.277064115484183,0,0.612975591598039,0.150238058906597,2.7223723958405,1.97328599257748,1.70845911054854,3.81477422087211,2.70081986475962,3.40073346486848,2.31876486041066,1.8611685633159,1.68776332241266,2.63079913935236,4.54380793639406,3.58994604704967,5.81925804547723,4.61512470271599,3.32481924151213,3.22165125389926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,1.47008711385542,0,0,0,0,0,4.97546649865724,0,0,0,0,0.977424915930974,0,1.44331342025273,0.231860809950154,2.7003999674239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,8.40983132590205,43.596006883328,3.9602674343313,2.58543431515556,0,0.845302752556,7.97814349754611,1.04007436911366,0.771622122786426,0,0.266422179016099,4.00338382242813,3.25572963234866,0,0.65147236858747,4.97548728239564,4.75171123760058,1.50719688529793,1.74306691720059,1.79951384127703,0,0,0,0.239624855491583,1.14861935834114,0,0.723906533337896,1.43833425785268,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0,0.670065061337395,0,0,0,0,4.78496817704646,11.0037514633129,1.08506009479894,5.40724239980099,0.713715955188647,0,0.585707074963566,0.300946099727719,0,0,0,0.553107505625109,1.56390506042549,16.4472972268702,27.7946173286793,0,0,0,0,0,0,1.48864684691266,0.920771839728375,1.68396056659844,1.53766979106841,1.02341449813341,1.93024705372329,0,2.92998418225046,3.72879623157567,3.77784917663522,3.63478100428535,0.929683027679674,0,0,0,12.3999604017775,5.28064387219479,9.04758463220026,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,1.62567862526312,1.50506932156456,0.509752546090077,0,0,0.219259876645935,0,0.256450125116389,1.31205858279882,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,7.25030387190915,1.23238893691716,2.45605879561807,1.7918754422989,6.98231591643779,1.88521702088497,2.38634556765083,8.19094727949984,0,0,0,0,0.464845549297286,0.94443704049192,1.3940745403212,4.00443654228915,1.06461206063404,3.47973196830029,0.9266210955196,0.715624433709956,1.48863347743867,2.21465597303108,0.571890581771475,1.79128453917934,0.42793898803392,13.0463331649634,3.92474320099615,1.07923474549989,1.92175920815238,0.942499218765491,2.02182481573316,1.58510321173008,4.21258456238981,3.41343617362713,2.19342140668156,0,6.41549583617533,12.0194617160656,5.65040583101214,13.7841335886531,0.66343897524122,0.876901770507525,2.89387767133344,3.9353685122798,0.202910376962704,1.54911749049875,2.53526042279017,1.43411352204052,0.0982490410131212,0,6.38569915327076,1.26664581178598,0.987884678879706,5.31262443272001,9.44823744661454,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0.281338832821026,0.667852230137435,3.29607748453519,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0,0,1.08507746200627,0,1.11136990144637,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.60298219312704,0,0,0,0.87754158861589,0,0,1.30815439456455,0,0,0,0,0.31900115973192,2.10674464824283,0.533034776018635,0,0.31396051279005,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.442287822516696,2.4441205797345,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0.30607276163049,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.969890164884194,0,0.90392296312213,0.685209623233754,0.19871461170299,0.189932387867636,0,0,1.06726497369676,0.19980960958213,0,0,0,0,0.372757606696298,0,0.407712618220842,0.313808538937,0.101998217636322,0.288950589901519,0,0.410716136675979,0,0.4297654414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| |||
|short_description=p@chr17:2117600..2117615,- | |||
}} |
Revision as of 13:04, 20 January 2014
Short description: | p@chr17:2117600..2117615, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:2117600..2117615, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.23e-21 | 55 |
muscle precursor cell | 6.33e-21 | 58 |
myoblast | 6.33e-21 | 58 |
multi-potent skeletal muscle stem cell | 6.33e-21 | 58 |
fibroblast | 3.37e-19 | 76 |
electrically responsive cell | 3.64e-18 | 61 |
electrically active cell | 3.64e-18 | 61 |
smooth muscle cell | 4.45e-15 | 43 |
smooth muscle myoblast | 4.45e-15 | 43 |
skin fibroblast | 1.91e-11 | 23 |
multi fate stem cell | 6.75e-11 | 427 |
cardiocyte | 1.93e-10 | 16 |
somatic stem cell | 2.77e-10 | 433 |
vascular associated smooth muscle cell | 1.22e-09 | 32 |
stem cell | 1.67e-09 | 441 |
mesodermal cell | 8.58e-09 | 121 |
cardiac fibroblast | 1.73e-07 | 6 |
cell of skeletal muscle | 4.39e-07 | 9 |