FFCP PHASE1:Hg19::chr17:1083234..1083294,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |||
|TSSclassifier=strong | |||
|UniProt=Q12979,E9PFN9,B3KW89,Q6ZT60 | |||
|association_with_transcript=-103bp_to_ENST00000302538,ENST00000382259,NM_021962,uc002fsd.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_ABR_5end | |||
|id=chr17:1083234..1083294,- | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-09!180;CL:0000222!1.55e-08!119;CL:0000115!4.91e-08!35;CL:0000147!5.11e-08!14;CL:0002078!1.02e-07!44;CL:0000148!7.25e-07!10;CL:0000541!7.25e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000147;4.87e-08;14!CL:0000115;4.40e-07;36!CL:0000148;6.94e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.02e-09,121;CL:0000115,4.07e-08,36;CL:0000147,4.94e-08,14;CL:0002078,8.20e-08,45;CL:0000148,7.05e-07,10;CL:0000541,7.05e-07,10;CL:0000213,9.21e-07,58;CL:0000215,9.21e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!7.93e-30!86;UBERON:0007284!7.93e-30!86;UBERON:0002346!9.83e-30!90;UBERON:0005743!4.21e-29!86;UBERON:0001049!1.19e-27!57;UBERON:0005068!1.19e-27!57;UBERON:0006241!1.19e-27!57;UBERON:0007135!1.19e-27!57;UBERON:0001017!4.17e-27!82;UBERON:0000073!7.00e-27!94;UBERON:0001016!7.00e-27!94;UBERON:0002616!3.65e-26!59;UBERON:0000955!5.95e-24!69;UBERON:0006238!5.95e-24!69;UBERON:0003056!8.62e-23!61;UBERON:0003080!1.97e-21!42;UBERON:0002780!2.39e-21!41;UBERON:0001890!2.39e-21!41;UBERON:0006240!2.39e-21!41;UBERON:0000025!3.24e-20!194;UBERON:0000033!6.62e-20!123;UBERON:0001893!1.23e-18!34;UBERON:0002020!1.40e-18!34;UBERON:0003528!1.40e-18!34;UBERON:0004111!1.88e-18!241;UBERON:0002791!5.43e-18!33;UBERON:0001869!1.42e-17!32;UBERON:0000924!1.45e-17!173;UBERON:0006601!1.45e-17!173;UBERON:0007023!1.73e-17!115;UBERON:0000153!2.50e-17!129;UBERON:0007811!2.50e-17!129;UBERON:0004121!2.94e-17!169;UBERON:0000119!9.04e-17!312;UBERON:0000468!1.21e-16!659;UBERON:0000483!2.44e-16!309;UBERON:0000477!7.06e-16!286;UBERON:0002619!2.29e-14!22;UBERON:0000922!3.89e-14!612;UBERON:0000956!2.99e-13!25;UBERON:0000203!2.99e-13!25;UBERON:0001950!4.38e-13!20;UBERON:0002050!2.34e-12!605;UBERON:0005423!2.34e-12!605;UBERON:0000923!3.37e-12!604;UBERON:0005291!3.37e-12!604;UBERON:0006598!3.37e-12!604;UBERON:0002532!3.37e-12!604;UBERON:0000467!7.25e-12!625;UBERON:0000480!1.28e-11!626;UBERON:0002049!9.32e-11!79;UBERON:0007798!9.32e-11!79;UBERON:0000475!9.58e-11!365;UBERON:0000055!2.76e-08!69;UBERON:0001981!5.63e-08!60;UBERON:0007500!5.63e-08!60;UBERON:0004537!5.63e-08!60;UBERON:0006965!5.63e-08!60;UBERON:0001009!1.12e-07!113;UBERON:0004872!1.31e-07!84;UBERON:0003076!2.13e-07!15;UBERON:0003057!2.13e-07!15;UBERON:0004535!2.59e-07!110;UBERON:0002420!4.74e-07!9;UBERON:0007245!4.74e-07!9;UBERON:0010009!4.74e-07!9;UBERON:0010011!4.74e-07!9;UBERON:0000454!4.74e-07!9;UBERON:0002308!7.23e-07!9;UBERON:0000125!7.23e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.38e-16;34!UBERON:0003528;5.47e-16;34!UBERON:0002020;5.47e-16;34!UBERON:0001869;6.68e-16;32!UBERON:0002791;8.79e-16;32!UBERON:0002780;1.35e-15;41!UBERON:0001890;1.35e-15;41!UBERON:0000073;4.23e-15;53!UBERON:0002616;4.23e-15;53!UBERON:0002619;2.23e-14;22!UBERON:0000956;2.34e-13;25!UBERON:0000203;2.34e-13;25!UBERON:0001950;4.30e-13;20!UBERON:0001017;2.15e-11;75!UBERON:0000955;2.63e-11;68!UBERON:0001016;2.20e-09;83!UBERON:0002420;4.45e-07;9!UBERON:0007245;4.45e-07;9!UBERON:0010009;4.45e-07;9!UBERON:0010011;4.45e-07;9!UBERON:0000454;4.45e-07;9!UBERON:0000125;6.78e-07;9!UBERON:0002308;6.78e-07;9 | |||
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| |||
|short_description=p1@ABR | |||
}} |
Revision as of 12:57, 20 January 2014
Short description: | p1@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABR_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -103bp_to_ENST00000302538, ENST00000382259, NM_021962, uc002fsd.2_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | Q12979E9PFN9B3KW89Q6ZT60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.02e-09 | 121 |
endothelial cell | 4.07e-08 | 36 |
pigment cell | 4.94e-08 | 14 |
meso-epithelial cell | 8.20e-08 | 45 |
melanocyte | 7.05e-07 | 10 |
melanoblast | 7.05e-07 | 10 |
lining cell | 9.21e-07 | 58 |
barrier cell | 9.21e-07 | 58 |