FFCP PHASE1:Hg19::chr16:89787360..89787381,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9605 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13526 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2B5 | |||
|association_with_transcript=12bp_to_ENST00000389386,NM_004913,uc002fom.1_5end | |||
|description=CAGE_peak_5_at_C16orf7_5end | |||
|id=chr16:89787360..89787381,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.77e-13!57;UBERON:0005068!5.77e-13!57;UBERON:0006241!5.77e-13!57;UBERON:0007135!5.77e-13!57;UBERON:0002616!1.49e-12!59;UBERON:0002020!5.19e-12!34;UBERON:0003528!5.19e-12!34;UBERON:0000468!1.41e-11!659;UBERON:0001893!1.89e-11!34;UBERON:0000467!2.41e-11!625;UBERON:0000955!2.94e-11!69;UBERON:0006238!2.94e-11!69;UBERON:0002780!3.05e-11!41;UBERON:0001890!3.05e-11!41;UBERON:0006240!3.05e-11!41;UBERON:0000480!4.21e-11!626;UBERON:0001869!4.23e-11!32;UBERON:0002791!4.87e-11!33;UBERON:0002619!9.81e-11!22;UBERON:0003080!1.74e-10!42;UBERON:0001017!1.81e-10!82;UBERON:0005743!3.69e-10!86;UBERON:0001950!9.16e-10!20;UBERON:0000956!1.29e-09!25;UBERON:0000203!1.29e-09!25;UBERON:0000073!1.36e-08!94;UBERON:0001016!1.36e-08!94;UBERON:0003075!4.12e-08!86;UBERON:0007284!4.12e-08!86;UBERON:0002050!1.36e-07!605;UBERON:0005423!1.36e-07!605;UBERON:0000923!1.56e-07!604;UBERON:0005291!1.56e-07!604;UBERON:0006598!1.56e-07!604;UBERON:0002532!1.56e-07!604;UBERON:0000025!2.01e-07!194;UBERON:0003056!2.23e-07!61;UBERON:0007023!2.77e-07!115;UBERON:0002346!4.69e-07!90;UBERON:0000922!4.99e-07!612;UBERON:0000062!6.81e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.23e-16;22!UBERON:0003528;9.96e-16;34!UBERON:0002020;9.96e-16;34!UBERON:0002791;5.96e-15;32!UBERON:0001869;5.96e-15;32!UBERON:0001950;7.13e-15;20!UBERON:0000956;4.91e-14;25!UBERON:0000203;4.91e-14;25!UBERON:0001893;2.00e-13;34!UBERON:0002780;5.84e-12;41!UBERON:0001890;5.84e-12;41!UBERON:0000073;3.30e-09;53!UBERON:0002616;3.30e-09;53!UBERON:0002021;7.52e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.77e-19,34;UBERON:0002020,1.77e-19,34;UBERON:0001049,5.46e-19,56;UBERON:0005068,5.46e-19,56;UBERON:0006241,5.46e-19,56;UBERON:0007135,5.46e-19,56;UBERON:0001893,1.17e-17,34;UBERON:0001869,1.26e-17,32;UBERON:0002791,1.42e-17,32;UBERON:0002619,2.03e-17,22;UBERON:0000073,7.69e-17,53;UBERON:0002616,7.69e-17,53;UBERON:0002780,2.78e-16,41;UBERON:0001890,2.78e-16,41;UBERON:0003080,2.78e-16,41;UBERON:0006240,2.78e-16,41;UBERON:0001950,2.06e-15,20;UBERON:0000956,1.04e-14,25;UBERON:0000203,1.04e-14,25;UBERON:0003075,4.52e-13,82;UBERON:0007284,4.52e-13,82;UBERON:0000955,1.15e-12,68;UBERON:0006238,1.15e-12,68;UBERON:0001017,2.91e-12,81;UBERON:0002346,5.81e-12,86;UBERON:0003056,4.22e-11,61;UBERON:0001016,1.03e-10,89;UBERON:0010371,1.07e-10,104;UBERON:0007023,1.00e-09,114;UBERON:0000025,3.92e-09,192;UBERON:0002021,1.73e-07,5;UBERON:0010314,6.85e-07,132 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,1.0007329835313,2.68176656656373,0,2.53299878168311,1.26343974685366,0.783556884599516,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0.37129905888014,1.32558950291166,2.01697543935533,1.80808358407193,0,0,0.246242116153576,0,0.626909442956176,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,1.30206522429511,0,0.32389366601898,0.515151135268373,1.01778767145695,0.377875943688809,0.242584061187816,0.697287110717054,0.822335776043652,0,8.63077176966451,6.14785695669842,2.12834006899727,1.03423704220986,0,1.35426486594342,1.50593871634084,0,0.449446968890169,2.44867113896722,0.962787081228281,0.639337125799041,4.28806690242731,4.58766412529753,3.83602275479425,0.870627715885752,0.56738522469114,0.622822248995575,7.28621129244555,4.69334626578181,0.868755378820466,2.42159801053347,0.736555271975129,0,0.211255286311942,0.425208599930087,0.628975936525128,0.44931452458598,0.450530678524519,0.16072558669708,0,0,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0.361439152384566,1.00267582127178,0.434539556882471,0,0.973269740605272,0.567208902984407,0,0.43917392846563,1.11332214173056,0,0.741568885568859,1.9472843619281,3.13433527138681,2.52620124985844,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,1.10047216776027,0,0.775250277507987,0.71153252537342,0.33472061276467,0.805658634218294,1.52054421143703,1.95249646038536,0,0.81014194788176,0.267899184852239,0.673588117878509,0.225222960966644,0,0,0,3.9534125230819,3.87780264148325,0.436094052142534,0,0.12663051166458,2.38336525463794,0.286836620748814,0,0,2.1349799145941,0.74000264525148,0.933633106199299,0.404132016209064,0.653847612453835,0.756787138224657,0.576175924479999,0,0,0.570471821544449,0.747243402759005,0.117434498643765,0.161872944368132,0.421352420106746,0.204154171254893,0.122834317311768,0.516628905878827,3.56400857184616,0,2.73048408581408,2.87447256726495,0.168336113954066,0,0.831192346452549,0.438977620880838,0.30648779579902,0.751190294532984,0,1.07633781413317,0.427114777637135,0.211931901159562,1.20036438433761,0.515262646192195,1.03056216018252,0.930584281657949,0.506328996723799,0.487185025805993,1.7670364197088,0.368199594569197,0.323292113637624,0.710019185033229,0.503760491138201,0,0.193260853163297,0.545492241181669,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,1.28648187638577,1.38134921352481,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.220587945464788,0.435758888184812,0.237270619111097,0.134831308160164,0,0,1.4763109092493,0,1.6462960453256,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0.245976877086227,0.171567810298526,0.329250856225877,1.1240175325762,0.100528972411631,0.277765335475589,0,0,1.44331342025273,0.695582429850461,0.352226082707465,0.577465791044295,1.38895653772983,1.14152491340759,0.790204397959275,0,0.492434012174795,1.17002132569619,0.594524649154913,0.93733833986777,0,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0.492663237895943,0,0.207328115540772,0.144119953416961,0.25248486685276,0.444485260045183,0.381988425558278,1.17217447210047,0,0.411309970813294,0,0.571652865261156,0.784917590417525,0.43596006883328,0.36669142910475,1.03417372606222,3.57656445851882,2.535908257668,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0.904318131178758,0.871533458600294,0.399891964728228,0,2.51128545716063,0,0.718874566474748,0,0,0.289562613335158,0.821905290201534,0.358121926479791,0.224170287987055,0,0,0.385029108839245,0,1.30139853857622,0.773288812777695,0.167516265334349,0,3.74503511973591,2.99161459204025,2.90090859405225,0.36807447515742,2.50085260529839,0.271265023699736,0.415941723061614,1.07057393278297,0.946214490203608,0.234282829985426,0,0,0,0,0.553107505625109,0.60818530127658,1.37060810223918,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0.992431231275107,0.61384789315225,0.280660094433074,0.640695746278505,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.328508624055237,0.519254429183621,0.464841513839837,0.241718899183244,0.40101294060657,0.276242966807689,0.114814448164607,0.182091168006717,0.393373244878272,0.902399225814824,0.385076685522074,0.784349769176855,1.46139224653261,0.422206515571503,1.13733384070897,0.510281115829547,0.215915916102139,0,1.35473218771926,1.50506932156456,0,0,0.447749509444357,0,0.261435451024901,0,1.31205858279882,0.325378394664303,0.206082023295445,0.183138929636687,0.247528499761764,0,1.30012049207304,0,0.290012154876366,0.154048617114644,0.307007349452259,0,0.214840489736547,0.435050081742686,0.340906509664404,0.267096106940212,0.165284915360978,0.192190067365106,0.127612712494584,0.50578890427775,0.464845549297286,1.25924938732256,1.3940745403212,1.23213432070436,0,0,1.11194531462352,0,0.372158369359667,0.632758849437452,1.14378116354295,1.02359116524534,0.42793898803392,0.636406495851874,0,0.179872457583315,0.823611089208164,0.353437207037059,0.808729926293264,0,0.842516912477962,0,1.21856744815642,0,0.682499557039929,0.141405431953713,1.13008116620243,0.551365343546124,1.32687795048244,0.876901770507525,1.73632660280006,0,0.811641507850816,0.30982349809975,1.40847801266121,0,0.196498082026242,0.35667105148125,0.709522128141196,0.633322905892992,0.329294892959902,0.379473173765715,1.39973888097993,0.192444225451024,0.670302275535787,1.08890984861323,0.847294206991012,0,1.68471475667626,1.33029046061003,0.918893600827838,1.52234282769651,0,1.70894156152249,1.66762242820452,2.46817363851717,5.18778648954174,0.540031437238115,3.96562588147135,0.320472213382419,0,0,0.185803175125719,0.144269212976445,0,0,0,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0.156679895773023,2.50634477090067,0.338583555603207,0,0,0,0.343505344755765,0,0.223676107892416,0.333698283423817,0.19538809540204,0.556812347790485,0,0.270455678475983,0,0,0.37428108081644,0,0.36408156524854,0,0,0.23874448473769,0.296964680832639,1.22864280839693,0,1.26602474769461,0.779160935160341,0.16480387422676,0.211125408127993,0,0.828851746593443,0.251932747854276,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.537063524026827,0.511572370226872,0.197286811273867,0,0,0.969332746095218,0.556608588971108,1.99613798001194,1.04171104434093,0.262379999988587,0,0.227586896570999,0,0,0.689486746482929,0,0,0,1.32656082487949,0,0.774054819518572,1.47773809476774,0.87754158861589,0.10893846351899,0,0,0.797594390929008,0.46112780877612,0,0,0.31900115973192,0.457987967009312,1.06606955203727,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0.796118080530053,0.611030144933625,0,0,0.104421949505455,0.471807930864739,0.802577647298789,1.87411556580271,0,0.782658475728359,0.242780379534093,0,2.41981432097328,0.91821828489147,0.252746318513952,0,0.103688191397247,0,0.992975867626496,0,0,0,0.277349346026277,0.173559738335131,0.293977192243133,0.261177619741208,0.17472666824203,0.51595809741485,0,0.365446585430928,0.164230914106418,0.484945082442097,0.0882561266915003,0,0.411125773940253,0.596143835108969,1.45614830698521,0,0.240476460754601,1.06726497369676,0.39961921916426,0,0,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0.523014231561666,0.101998217636322,0.288950589901519,1.80126086612937,1.9166753044879,0,1.71906176567983,0,0.279282401272254,0,0,0.399358000997982,0.429226048136571,0.223171457441873,0.201550417460179,0.360299883542404,0,0.157566364614447,0.576911008668165,0.26961417541674,0.0984274815147488,0.0846733320657845,1.59045937961861,1.63444087333891,0.160753148465019,0.137539436597234,0,0,0.77380195455795,1.88323625639876,0.670869375198532,0.472834243795189,0.472091293214983,0.211200673038813,0.179287339332845,0.383830394638891,1.42939065274673,0,0,1.08599920350743,1.72844298240254,1.30634944043764,0,0.082092520749339,2.21504428321048,0.226624183040251,0.58620893471233,1.32506888912221,1.29282956361551,2.38018683136842,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0.992332043623902,0,0.243585196761792,0.638341257770182,0.544017803369474,0.2506898940227,0,0,0.157054096250234,4.43034089983493,2.19647276823534,0.876336514945499,1.72022758707021,0.998361463831671,0.745156835296601,0.138348634936231,0.499921631848426,0,0,0,0.468334905806882,0.144921028610825,0.597019211547496,0.233713309847224,1.10961172300523,1.32582103692562,0.50313580350515,1.77962244319307,0.228840068396924,0.604923695052956,0.777186002913902,0.443565449968902,0.477890301491107,0.899606224327209,0.465788870628778,1.65882483136342,0.265841714557995,0,1.95334891696384,1.52322084867518,0.406870733204662,0.363697318405119,1.18151612746737,1.39210127963548,1.59238355479446,0.800055529326307,0,0,0,0.192619830407303,0,0.521988583930423,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0.438568099157414,0.883445729729405,0.192914038270915,0.675769762612291,0,0,0,1.52084279766904,0,0.265729680626726,0,0,0.491545817507439,0.211312123358627,0.39997479170986,0.320075189082423,0,0,0.368211900503681,0.139879507719444,0,0,0.107824811396682,0,0.109209638192014,0,0.212574920101683,0,0,0.636008701306837,0,0,0.352675943690684,1.531227386766,1.22035527683273,2.8339315265117,1.91560630868582,1.64093091392604,2.01657356977374,1.72893131160545,1.61475645631851,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0.225630985047772,0.60511520611056,0,0.261906694481422,0.327543835020193,0.147856086217045,1.35075169236789,0.781078098613847,2.06686796501184,1.39514782426595,1.09394961803644,0,0.496211178389294,0.175871244359621,0.255524855279191,0,1.68141861109412,0,0.455324382702595,0.266107110487916,0.460935950223117,0.171488009437418,1.97112225632812,1.38122824481983,0.472775363535873,0,0.078493092850514,0.785577949580009,0.280272163313789,0.913158720509496,0,0,0.285906176706625,0,0.116241425368125,0,0.801711364730253,0.414432328326074,0,0,0.430227358820278,0.946656005844523,1.10777426186905,0,0.22910686854405,0.62041277132864,0.955538938977433,0.559277158988962,0,0.487671699929078,0,0.615976841137482,0,0,0.233939463462106,0,1.30812099855325,0.45178432815584,0.109940516745429,0,0.771741581079447,0.655678681511872,0,0,0.235676547101626,1.37415926980462,1.18818560130834,1.2679671827502,0.509781344063451,0.375935671919414,0.580120991762195,0.0999411559249289,0.535661815816973,0.352894871715692,0.320965466756673,0,0,1.29005624836306,0.157771562193185,2.85564258801842,1.74540276136151,1.0580536810308,1.85997509083376,2.31087814315709,0.432626562123789,0.252332849670158,0.109265571963696,0.253397002022874,0,0,0,0,3.33426272160253,4.55539021265503,0.829169439458779,0.930896962757057,0.639701945702943,0.476128862927481,0,0.248298857183432,0.448527450322454,0.12729431655633,0.202117188958219,0.653150243690884,0.684466602170562,0.0673520530145875,0.645499848534087,0,0.569822880276821,0,0,0.628776414746108,2.34640942403454,0.488965776731466,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p5@C16orf7 | |||
}} |
Revision as of 12:51, 20 January 2014
Short description: | p5@C16orf7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C16orf7_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000389386, NM_004913, uc002fom.1_5end |
EntrezGene: | C16orf7 |
HGNC: | 13526 |
UniProt: | Q9Y2B5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain grey matter | 1.77e-19 | 34 |
gray matter | 1.77e-19 | 34 |
neural tube | 5.46e-19 | 56 |
neural rod | 5.46e-19 | 56 |
future spinal cord | 5.46e-19 | 56 |
neural keel | 5.46e-19 | 56 |
telencephalon | 1.17e-17 | 34 |
cerebral hemisphere | 1.26e-17 | 32 |
regional part of telencephalon | 1.42e-17 | 32 |
regional part of cerebral cortex | 2.03e-17 | 22 |
regional part of nervous system | 7.69e-17 | 53 |
regional part of brain | 7.69e-17 | 53 |
regional part of forebrain | 2.78e-16 | 41 |
forebrain | 2.78e-16 | 41 |
anterior neural tube | 2.78e-16 | 41 |
future forebrain | 2.78e-16 | 41 |
neocortex | 2.06e-15 | 20 |
cerebral cortex | 1.04e-14 | 25 |
pallium | 1.04e-14 | 25 |
neural plate | 4.52e-13 | 82 |
presumptive neural plate | 4.52e-13 | 82 |
brain | 1.15e-12 | 68 |
future brain | 1.15e-12 | 68 |
central nervous system | 2.91e-12 | 81 |
neurectoderm | 5.81e-12 | 86 |
pre-chordal neural plate | 4.22e-11 | 61 |
nervous system | 1.03e-10 | 89 |
ecto-epithelium | 1.07e-10 | 104 |
adult organism | 1.00e-09 | 114 |
tube | 3.92e-09 | 192 |
occipital lobe | 1.73e-07 | 5 |
structure with developmental contribution from neural crest | 6.85e-07 | 132 |