FFCP PHASE1:Hg19::chr16:87871480..87871532,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C570 | |||
|description=CAGE_peak_at_chr16:87871480..87871532,- | |||
|id=chr16:87871480..87871532,- | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-18!254;CL:0002076!1.19e-10!43;CL:0000223!2.09e-09!59;CL:0000063!8.21e-09!578;CL:0000548!3.03e-08!679;CL:0000004!3.03e-08!679;CL:0000255!3.03e-08!679;CL:0000012!4.70e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.40e-11;42!CL:0002368;1.29e-07;13!CL:0002077;1.30e-07;34!CL:0002251;7.54e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.52e-28,253;CL:0002076,2.04e-14,42;CL:0000223,6.44e-13,58;CL:0002077,1.47e-08,34;CL:0002368,1.42e-07,13;CL:0002251,9.22e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;1.76e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!6.27e-11!143;DOID:305!2.58e-10!106;DOID:162!1.13e-09!235;DOID:14566!4.03e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.41e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.85e-12,106;DOID:0050687,6.86e-11,143;DOID:1749,1.46e-07,14;DOID:162,1.47e-07,235;DOID:14566,5.29e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.69e-07;9!UBERON:0001557;1.69e-07;9!UBERON:0003729;3.25e-07;13!UBERON:0000486;7.85e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.92e-08,160;UBERON:0000925,2.92e-08,160;UBERON:0006595,2.92e-08,160;UBERON:0001737,1.94e-07,9;UBERON:0003729,2.76e-07,13;UBERON:0001004,8.52e-07,74 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,0,0,0,0,0.631719873426831,0,0.982935746006035,4.18680700783456,2.62129646556207,2.37390280405608,0,0,0,0,0.730310090387373,0,0.61560529038394,0.612002073732759,0.940364164434263,0,0.410623275218653,0.502170558379211,0.229240217243854,0.656804715599566,0.472264687882075,0,0,0.77408061658038,2.75826367343678,4.51808878167375,8.8740962440029,0.309868802321207,0.142169232487422,0,1.10799081706375,0.802177789880567,0.217010870715852,0,0,0,0,0,0,0.697287110717054,2.87817521615278,2.16794459626573,2.3015391385772,0.512321413058201,0.709446689665756,1.03423704220986,1.93645405075148,0,1.31769637679823,2.18324920046277,0.674170453335254,5.20342617030534,2.88836124368484,3.83602275479425,0.329851300186716,1.19678194572979,0,6.67481248845743,1.13477044938228,4.35975574296902,1.25624332628372,0.521482918420201,0.434377689410233,0.605399502633369,1.47311054395026,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0,1.57204305099666,0.616804496998528,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,2.40696176205157,0.434473211648397,0,0,0.511450247374121,1.80719576192283,0.50133791063589,1.59331170856906,0,0.973269740605272,0,0.665188192387692,0.43917392846563,0.458426764241994,8.01449634243593,7.78647329847302,0,0.174129737299267,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,3.92484646928281,2.98183171017191,0.886413581652058,0,1.72101972449288,0.709336764396714,0.560677600142307,1.06748995729705,1.97334038733728,0,0.942974704487816,0.326923806226917,0,0,2.10889288650417,0,0,0.298897361103602,0.704606991862589,0.161872944368132,0.140450806702248,0,0,0.206651562351531,2.37600571456411,1.97813543422845,0,2.87447256726495,0,0.250237039743928,0,0,2.14541457059314,1.20190447125277,0.453728732640084,0.358779271377724,0.640672166455702,0.847727604638247,0.900273288253207,0.515262646192195,0.257640540045629,0,0.337552664482532,1.26668106709558,0.252433774244115,0.828449087780694,0,0.710019185033229,0.705264687593482,0.339121184620975,2.70565194428616,3.00020732649918,3.15485054927904,0.609868530647977,0.265059536642971,0.813357600086629,0.518305275076852,0.756962552626885,0.36497735907583,0,4.5026865673502,0,0,0,4.25904480143438,4.21461725195254,3.13314338848527,7.05881425487321,3.7039505495709,2.60997681022206,3.10112008768378,2.74710051175484,0.769494313892781,0,5.60967095213783,0.4115740113314,0,0,0,0,0,0.860919069801795,0.514703430895577,7.13376855156066,7.86812272803337,4.2222168412885,7.22189872236531,0.651616610620649,1.03993478527958,0,0,0.469634776943287,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0,0,0.335964256397719,1.27597587518148,5.28395283946805,5.23141089325132,6.13412286664338,0,0.704387472105808,0.207328115540772,0.432359860250884,0,2.47641787739459,6.49380323449072,10.5495702489042,13.6857956818164,6.68378702571603,4.80548892550268,4.57322292208925,0.560655421726804,0.87192013766656,0.8800594298514,0.775630294546667,0,0,0.797814349754612,0,0.514414748524284,1.41849132023278,0.799266537048298,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,2.87549826589899,4.59447743336456,0,0.723906533337896,0.205476322550383,0,0.672510863961164,0.591092280605782,1.07813787429759,0.513372145118994,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0.749007023947182,0,1.65766205374414,0,0,0.542530047399471,1.03985430765404,3.92543775353756,0.473107245101804,0,0.902838299183157,2.27407504055985,1.03473071292505,0.664225598535437,0.184369168541703,0.0868836144680828,0.391602314925481,1.37257369524342,0,0.215714200818617,0.533637789017222,5.45629628603267,6.65741758041988,3.62868351995616,0.744323423456331,0,1.68396056659844,0.896974044789907,0,1.12597744800525,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,3.62578348774867,8.62177822304125,23.2964902007818,1.03333003348146,2.36718518408732,0.786746489756545,0,0.308061348417659,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.812839312631559,0.501689773854853,1.27438136522519,0.831076008928724,1.79099803777743,1.09629938322967,0.522870902049801,1.79515087581472,0.328014645699706,4.88067591996455,0.412164046590889,0.54941678891006,0.660075999364704,5.74265537996172,9.75090369054782,0,4.44685304143761,0.154048617114644,0.307007349452259,0.413509717453592,0.214840489736547,0,0.426133137080504,0.979352392114111,14.5450725517661,10.7626437724459,1.27612712494584,9.50883140042169,1.85938219718914,1.5740617341532,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.715624433709956,0,0,0,0.767693373934002,0,0.318203247925937,1.56989728039846,0,0,0,0.202182481573316,1.585103211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| |||
|short_description=p@chr16:87871480..87871532,- | |||
}} |
Revision as of 12:42, 20 January 2014
Short description: | p@chr16:87871480..87871532, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87871480..87871532, - |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.52e-28 | 253 |
endo-epithelial cell | 2.04e-14 | 42 |
endodermal cell | 6.44e-13 | 58 |
ecto-epithelial cell | 1.47e-08 | 34 |
respiratory epithelial cell | 1.42e-07 | 13 |
epithelial cell of alimentary canal | 9.22e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.92e-08 | 160 |
endoderm | 2.92e-08 | 160 |
presumptive endoderm | 2.92e-08 | 160 |
larynx | 1.94e-07 | 9 |
mouth mucosa | 2.76e-07 | 13 |
respiratory system | 8.52e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.85e-12 | 106 |
cell type cancer | 6.86e-11 | 143 |
squamous cell carcinoma | 1.46e-07 | 14 |
cancer | 1.47e-07 | 235 |
disease of cellular proliferation | 5.29e-07 | 239 |