FFCP PHASE1:Hg19::chr16:87799523..87799603,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54758 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25272 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TBB5 | |||
|association_with_transcript=0bp_to_ENST00000270583,ENST00000347925,ENST00000353170,NM_001184854,NM_001184856,NM_017566,uc002fki.2,uc002fkj.2,uc002fkk.2,uc002fkl.2_5end | |||
|description=CAGE_peak_1_at_KLHDC4_5end | |||
|id=chr16:87799523..87799603,- | |||
|ontology_enrichment_celltype=CL:0000542!7.71e-11!53;CL:0000051!7.71e-11!53;CL:0000838!8.08e-11!52;CL:0000791!7.66e-09!18;CL:0000789!7.66e-09!18;CL:0002420!7.66e-09!18;CL:0002419!7.66e-09!18;CL:0000790!7.66e-09!18;CL:0000625!3.79e-08!11;CL:0000084!1.16e-07!25;CL:0000827!1.16e-07!25;CL:0000988!2.31e-07!182;CL:0000037!7.51e-07!172;CL:0000566!7.51e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.71e-09;18!CL:0000789;7.71e-09;18!CL:0002419;7.71e-09;18!CL:0000625;3.89e-08;11!CL:0000084;1.21e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.71e-11,53;CL:0000051,7.71e-11,53;CL:0000838,8.08e-11,52;CL:0000791,7.66e-09,18;CL:0000789,7.66e-09,18;CL:0002420,7.66e-09,18;CL:0002419,7.66e-09,18;CL:0000790,7.66e-09,18;CL:0000625,3.79e-08,11;CL:0000084,1.16e-07,25;CL:0000827,1.16e-07,25;CL:0000988,5.20e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;7.71e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=3.99692434395225,7.92171938396638,5.77913056793482,8.00586386825043,6.70441641640932,3.48935409640147,17.7309914717817,9.47579810140246,16.7158802047897,17.4471094916071,36.2856607345662,12.0142754671595,16.3535526501641,11.5102708252843,15.575676659212,14.7911532219391,11.4511960324556,13.8758917173601,6.34312638427659,32.7502014484256,27.3360926267299,24.4494682752909,15.7429792922081,17.3830519842563,19.4591091371944,20.2495525232071,22.4134609198352,21.7241756425755,37.7629705774948,48.746333558346,21.5194411409346,17.4690032650996,19.8795906393645,22.1852406100073,17.97239053463,39.9495543289654,22.6072338287832,26.5917796095301,23.8647892489469,31.0325545123668,15.8979986710346,13.6035339727971,15.196958490417,9.74168199823083,18.1380452970629,14.555043671269,11.8538808821899,9.04569353648017,11.7688420940139,9.78154133895312,13.8326781525714,10.8781825748749,14.1345729102014,14.2006630388442,8.12558919566051,11.6710250516415,9.82462140208245,10.1125568000288,12.2433556948361,15.7255223267286,14.0654167675789,9.89553900560148,12.3667467725412,11.5080682643827,11.3181603065148,14.7520158419696,10.5879782329248,12.0599359323237,11.4726242052444,13.2485195270121,15.1349875658342,12.5214396235772,11.7091083353127,21.1255286311942,19.7721998967491,21.3851818418543,17.2986091965602,18.6219347123468,21.0550518573175,18.8108410869224,15.1176674671308,21.5543701442268,19.3595868907455,26.7607919518444,15.1216573156804,20.0563204606258,18.0178194166206,31.0366317575421,21.1534359291156,22.8972901088487,28.4606484554724,28.774622279176,23.318666915639,25.1125524300149,42.5986507865967,16.0664291712797,24.3920114941153,20.4365596629566,28.1674053629328,41.6294373522788,31.6144598634583,33.6147942071661,46.7584148178987,29.523771074571,24.1576844129366,27.2486690337854,31.6840520605068,31.2542820130647,32.7749555850893,27.7900058780213,27.0823017430131,33.327354859531,34.6990557799221,64.4773395696209,40.7688542839409,38.9784138879628,53.2676486106671,37.111764112124,49.8448793278421,44.5991580053735,48.8312590392314,46.5721501779703,47.1300122713429,47.6110193494436,64.9639778072198,36.9372513188666,43.5197838368155,44.1518767662164,37.976507801258,50.9781901667452,7.31420598941885,18.1089232119982,8.438929081673,14.0961269429981,9.5254203020819,6.66293987219789,4.7717156823066,10.2193322763554,18.3397545298292,14.6341402325292,16.6886092816939,23.8381917405837,23.3148984507227,26.3256954376945,14.2800853208061,12.0149518736494,10.2377629599526,45.0747279937096,41.1836335761692,57.5759127060826,16.4972798114365,22.3660994727592,19.0927275884177,22.6123176769604,24.3309673001745,18.4329088099845,21.5264815532915,15.5050055501597,12.4518191940349,13.7235451233515,17.7244899528025,15.2054421143703,16.8402819708237,16.5448386155641,19.4434067491622,20.5389375053383,23.5755841257478,20.0448435260314,27.596994743859,20.8838445104988,17.0377621855279,17.1314542666882,3.87780264148325,16.1354799292738,7.45457927542978,13.1695732131163,17.0807843249052,23.2337662806539,12.0587249947441,8.97084160227691,19.2148192313469,15.0467204534468,7.15785381419462,11.1809857817841,11.9327189272825,11.2004496457249,7.49028701823999,22.2605360242107,10.6134426122309,14.2617955386112,12.4042404857995,11.3911463684452,8.25552016277471,11.0956137294776,11.0243252477642,11.4235915099944,9.19599452464312,17.8200428592308,14.5887488274349,20.9337113245746,22.2771623963034,11.1101835209684,15.0142223846357,12.190821081304,13.608306247306,16.5503409731471,13.9721394783135,8.28054937068154,23.5000422752409,10.8914268297469,10.5965950579781,24.3073787828366,14.0151439764277,24.7334918443804,9.49195967291108,16.2025278951616,9.15907848515267,20.1947019395292,9.20498986422994,13.5782687727802,22.3656043285467,9.97445772453639,9.83451435400828,9.46978180500154,8.45512973831587,9.75135624322613,32.9329006549908,36.048096983444,27.5379644600759,22.2871268283046,25.9890476401897,37.9576453438863,14.0804579096834,5.78916844373597,17.9575397758225,8.35862270457562,7.94067429836544,23.5430532079289,22.7589331605437,26.7522243170665,25.6984956466478,25.0561360706267,26.3370387213317,24.8089607014703,26.4898977919217,28.8560367709793,17.7157309109916,19.6338483324824,18.520830509913,22.0513067078313,35.4914097501126,33.4161253670393,36.0381843075657,82.9950626899543,15.9884970106048,9.77936518701596,10.9750285408626,11.240175325762,14.8782879169214,8.61072539974325,33.5582554469634,21.8386304908711,11.5465073620219,13.4479269771089,11.9756868120538,16.0246757014792,16.2044929401814,15.9813487877063,35.5591979081674,43.7827942668385,14.5268033591564,10.5301919312657,13.8226980928517,12.185398418281,7.72717789714754,10.633132293179,13.7024539735358,15.40359874124,20.7026646749214,19.7065295158377,13.4714104040236,23.2207489405665,22.338592779629,25.1222442518496,9.08019888378017,12.9876064689814,21.0991404978085,17.1072446022705,12.2364716316955,15.3174959500398,8.00314011365619,18.1652356639484,16.5664826156646,9.6806537283654,9.824650397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| |||
|short_description=p1@KLHDC4 | |||
}} |
Revision as of 12:42, 20 January 2014
Short description: | p1@KLHDC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLHDC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000270583, ENST00000347925, ENST00000353170, NM_001184854, NM_001184856, NM_017566, uc002fki.2, uc002fkj.2, uc002fkk.2, uc002fkl.2_5end |
EntrezGene: | KLHDC4 |
HGNC: | 25272 |
UniProt: | Q8TBB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.71e-11 | 53 |
common lymphoid progenitor | 7.71e-11 | 53 |
lymphoid lineage restricted progenitor cell | 8.08e-11 | 52 |
mature alpha-beta T cell | 7.66e-09 | 18 |
alpha-beta T cell | 7.66e-09 | 18 |
immature T cell | 7.66e-09 | 18 |
mature T cell | 7.66e-09 | 18 |
immature alpha-beta T cell | 7.66e-09 | 18 |
CD8-positive, alpha-beta T cell | 3.79e-08 | 11 |
T cell | 1.16e-07 | 25 |
pro-T cell | 1.16e-07 | 25 |
hematopoietic cell | 5.20e-07 | 177 |