FFCP PHASE1:Hg19::chr16:86600870..86600921,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3801 | |||
|TSSclassifier=strong | |||
|UniProt=Q99958 | |||
|association_with_transcript=13bp_to_ENST00000320354,NM_005251,uc002fjq.2_5end | |||
|description=CAGE_peak_2_at_FOXC2_5end | |||
|id=chr16:86600870..86600921,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.88e-35!180;CL:0000183!1.71e-21!59;CL:0000222!1.02e-20!119;CL:0000680!8.78e-20!57;CL:0000056!8.78e-20!57;CL:0000355!8.78e-20!57;CL:0000187!1.19e-18!54;CL:0000057!3.65e-17!75;CL:0000192!1.76e-15!42;CL:0000514!1.76e-15!42;CL:0000393!3.10e-15!60;CL:0000211!3.10e-15!60;CL:0000359!3.60e-14!32;CL:0002371!1.45e-08!591;CL:0002139!5.04e-08!24;CL:0000220!6.10e-08!246;CL:0002321!8.93e-08!248;CL:0000115!1.25e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.93e-15;32!CL:0000192;4.16e-11;43!CL:0000187;1.54e-09;55!CL:0000393;3.86e-07;61!CL:0000211;3.86e-07;61!CL:1000449;4.71e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.85e-17,58;CL:0000056,2.85e-17,58;CL:0000355,2.85e-17,58;CL:0000222,8.21e-17,121;CL:0000187,1.40e-16,55;CL:0000359,6.10e-16,32;CL:0000192,7.44e-15,43;CL:0000514,7.44e-15,43;CL:0000393,1.19e-13,61;CL:0000211,1.19e-13,61;CL:0000057,8.81e-13,76;CL:1000449,5.87e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;4.16e-11;43!CL:0000355;2.88e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.24e-28!79;UBERON:0007798!2.24e-28!79;UBERON:0004872!1.38e-25!84;UBERON:0001009!2.21e-23!113;UBERON:0004535!5.46e-23!110;UBERON:0000914!6.24e-23!83;UBERON:0002329!6.24e-23!83;UBERON:0003077!6.24e-23!83;UBERON:0003059!6.24e-23!83;UBERON:0007282!6.24e-23!83;UBERON:0009618!6.24e-23!83;UBERON:0007285!6.24e-23!83;UBERON:0000055!1.51e-22!69;UBERON:0001981!1.53e-22!60;UBERON:0007500!1.53e-22!60;UBERON:0004537!1.53e-22!60;UBERON:0006965!1.53e-22!60;UBERON:0003914!1.05e-20!118;UBERON:0004290!4.24e-19!70;UBERON:0001134!2.01e-18!61;UBERON:0002036!2.01e-18!61;UBERON:0003082!2.01e-18!61;UBERON:0002385!4.18e-18!63;UBERON:0001015!4.18e-18!63;UBERON:0000383!4.18e-18!63;UBERON:0001637!6.77e-18!42;UBERON:0003509!6.77e-18!42;UBERON:0004572!6.77e-18!42;UBERON:0005256!1.71e-17!143;UBERON:0000486!3.04e-17!82;UBERON:0000119!3.56e-14!312;UBERON:0000483!1.61e-13!309;UBERON:0004573!3.48e-13!33;UBERON:0004571!3.48e-13!33;UBERON:0000477!5.15e-13!286;UBERON:0002100!1.03e-12!216;UBERON:0000475!4.26e-12!365;UBERON:0000481!6.92e-12!347;UBERON:0003103!2.24e-11!69;UBERON:0000468!3.30e-11!659;UBERON:0000490!3.82e-11!138;UBERON:0003104!4.97e-10!238;UBERON:0009142!4.97e-10!238;UBERON:0004111!7.88e-10!241;UBERON:0000467!9.11e-10!625;UBERON:0000480!1.32e-09!626;UBERON:0007100!1.55e-09!27;UBERON:0000948!2.36e-09!24;UBERON:0005498!2.36e-09!24;UBERON:0004140!2.36e-09!24;UBERON:0009881!2.36e-09!24;UBERON:0004141!2.36e-09!24;UBERON:0003084!2.36e-09!24;UBERON:0007005!2.36e-09!24;UBERON:0004139!2.36e-09!24;UBERON:0004291!2.36e-09!24;UBERON:0000926!1.75e-08!448;UBERON:0004120!1.75e-08!448;UBERON:0006603!1.75e-08!448;UBERON:0000025!3.21e-08!194;UBERON:0004876!3.16e-07!20;UBERON:0000923!3.30e-07!604;UBERON:0005291!3.30e-07!604;UBERON:0006598!3.30e-07!604;UBERON:0002532!3.30e-07!604;UBERON:0000947!3.72e-07!21;UBERON:0010191!3.72e-07!21;UBERON:0002050!4.50e-07!605;UBERON:0005423!4.50e-07!605;UBERON:0000922!4.59e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.28e-14;42!UBERON:0003509;5.28e-14;42!UBERON:0004572;5.28e-14;42!UBERON:0004573;2.56e-11;33!UBERON:0004571;2.56e-11;33!UBERON:0002049;3.64e-11;75!UBERON:0007798;3.64e-11;75!UBERON:0007500;4.22e-11;56!UBERON:0001981;4.22e-11;56!UBERON:0004537;4.22e-11;56!UBERON:0003914;1.12e-09;74!UBERON:0000055;2.82e-09;65!UBERON:0006876;3.57e-08;11!UBERON:0006555;4.71e-07;15!UBERON:0004819;4.71e-07;15!UBERON:0001285;4.71e-07;15!UBERON:0007684;4.71e-07;15!UBERON:0004535;4.74e-07;109!UBERON:0000075;6.21e-07;16!UBERON:0000948;7.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.22e-27,78;UBERON:0007798,1.22e-27,78;UBERON:0004535,5.43e-22,109;UBERON:0004872,9.08e-22,83;UBERON:0007500,2.20e-21,59;UBERON:0001981,2.20e-21,59;UBERON:0004537,2.20e-21,59;UBERON:0006965,2.20e-21,59;UBERON:0001009,8.62e-21,112;UBERON:0000055,1.72e-20,68;UBERON:0007503,2.38e-20,78;UBERON:0001637,2.04e-19,42;UBERON:0003509,2.04e-19,42;UBERON:0004572,2.04e-19,42;UBERON:0007524,2.78e-18,73;UBERON:0002329,5.38e-18,71;UBERON:0003059,5.38e-18,71;UBERON:0007282,5.38e-18,71;UBERON:0004290,5.38e-18,71;UBERON:0009618,5.38e-18,71;UBERON:0003914,5.49e-18,117;UBERON:0003077,1.61e-17,72;UBERON:0007285,1.61e-17,72;UBERON:0001134,4.96e-16,62;UBERON:0002036,4.96e-16,62;UBERON:0003082,4.96e-16,62;UBERON:0000486,1.69e-15,83;UBERON:0002385,4.33e-15,64;UBERON:0001015,4.33e-15,64;UBERON:0000383,4.33e-15,64;UBERON:0003104,6.99e-15,160;UBERON:0009142,6.99e-15,160;UBERON:0004573,4.22e-13,33;UBERON:0004571,4.22e-13,33;UBERON:0000490,3.88e-10,148;UBERON:0000119,4.92e-10,309;UBERON:0000483,2.24e-09,306;UBERON:0005256,2.54e-09,122;UBERON:0001444,1.49e-08,49;UBERON:0006876,3.13e-08,11;UBERON:0000926,8.05e-08,315;UBERON:0004120,8.05e-08,315;UBERON:0006603,8.05e-08,315;UBERON:0000033,8.47e-08,56;UBERON:0000948,1.05e-07,24;UBERON:0005498,1.05e-07,24;UBERON:0004140,1.05e-07,24;UBERON:0009881,1.05e-07,24;UBERON:0004141,1.05e-07,24;UBERON:0003084,1.05e-07,24;UBERON:0007005,1.05e-07,24;UBERON:0004139,1.05e-07,24;UBERON:0004291,1.05e-07,24;UBERON:0000153,3.42e-07,62;UBERON:0007811,3.42e-07,62;UBERON:0003103,4.15e-07,68;UBERON:0000075,5.72e-07,16;UBERON:0004211,5.87e-07,15;UBERON:0009773,5.87e-07,15;UBERON:0001231,5.87e-07,15;UBERON:0001285,5.87e-07,15;UBERON:0007684,5.87e-07,15;UBERON:0004208,5.87e-07,15;UBERON:0002100,8.86e-07,199 | |||
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| |||
|short_description=p2@FOXC2 | |||
}} |
Revision as of 12:39, 20 January 2014
Short description: | p2@FOXC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000320354, NM_005251, uc002fjq.2_5end |
EntrezGene: | FOXC2 |
HGNC: | 3801 |
UniProt: | Q99958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.85e-17 | 58 |
myoblast | 2.85e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.85e-17 | 58 |
mesodermal cell | 8.21e-17 | 121 |
muscle cell | 1.40e-16 | 55 |
vascular associated smooth muscle cell | 6.10e-16 | 32 |
smooth muscle cell | 7.44e-15 | 43 |
smooth muscle myoblast | 7.44e-15 | 43 |
electrically responsive cell | 1.19e-13 | 61 |
electrically active cell | 1.19e-13 | 61 |
fibroblast | 8.81e-13 | 76 |
epithelial cell of nephron | 5.87e-07 | 15 |