FFCP PHASE1:Hg19::chr16:75498277..75498298,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124491 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29577 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_uc002feb.2_5end | |||
|description=CAGE_peak_3_at_TMEM170A_5end | |||
|id=chr16:75498277..75498298,- | |||
|ontology_enrichment_celltype=CL:0000791!2.27e-10!18;CL:0000789!2.27e-10!18;CL:0002420!2.27e-10!18;CL:0002419!2.27e-10!18;CL:0000790!2.27e-10!18;CL:0000838!3.68e-09!52;CL:0000542!4.26e-09!53;CL:0000051!4.26e-09!53;CL:0000084!2.67e-07!25;CL:0000827!2.67e-07!25;CL:0000625!2.85e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.04e-11;18!CL:0000789;7.04e-11;18!CL:0002419;7.04e-11;18!CL:0000084;2.48e-08;25!CL:0000625;7.94e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.46e-11,18;CL:0000789,6.46e-11,18;CL:0002420,6.46e-11,18;CL:0002419,6.46e-11,18;CL:0000790,6.46e-11,18;CL:0000838,1.30e-09,52;CL:0000542,1.52e-09,53;CL:0000051,1.52e-09,53;CL:0000084,4.22e-08,25;CL:0000827,4.22e-08,25;CL:0000625,1.26e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.04e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.16e-11!115;UBERON:0001049!2.02e-08!57;UBERON:0005068!2.02e-08!57;UBERON:0006241!2.02e-08!57;UBERON:0007135!2.02e-08!57;UBERON:0002020!3.28e-07!34;UBERON:0003528!3.28e-07!34;UBERON:0001893!3.54e-07!34;UBERON:0002791!5.80e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.45e-11,114;UBERON:0001049,4.05e-08,56;UBERON:0005068,4.05e-08,56;UBERON:0006241,4.05e-08,56;UBERON:0007135,4.05e-08,56;UBERON:0000073,2.47e-07,53;UBERON:0002616,2.47e-07,53;UBERON:0003528,3.07e-07,34;UBERON:0002020,3.07e-07,34;UBERON:0001893,3.32e-07,34 | |||
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| |||
|short_description=p3@TMEM170A | |||
}} |
Revision as of 12:18, 20 January 2014
Short description: | p3@TMEM170A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM170A_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_uc002feb.2_5end |
EntrezGene: | TMEM170A |
HGNC: | 29577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.46e-11 | 18 |
alpha-beta T cell | 6.46e-11 | 18 |
immature T cell | 6.46e-11 | 18 |
mature T cell | 6.46e-11 | 18 |
immature alpha-beta T cell | 6.46e-11 | 18 |
lymphoid lineage restricted progenitor cell | 1.30e-09 | 52 |
lymphocyte | 1.52e-09 | 53 |
common lymphoid progenitor | 1.52e-09 | 53 |
T cell | 4.22e-08 | 25 |
pro-T cell | 4.22e-08 | 25 |
CD8-positive, alpha-beta T cell | 1.26e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.45e-11 | 114 |
neural tube | 4.05e-08 | 56 |
neural rod | 4.05e-08 | 56 |
future spinal cord | 4.05e-08 | 56 |
neural keel | 4.05e-08 | 56 |
regional part of nervous system | 2.47e-07 | 53 |
regional part of brain | 2.47e-07 | 53 |
brain grey matter | 3.07e-07 | 34 |
gray matter | 3.07e-07 | 34 |
telencephalon | 3.32e-07 | 34 |