FFCP PHASE1:Hg19::chr16:57398312..57398334,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr16:57398312..57398334,- | |||
|id=chr16:57398312..57398334,- | |||
|ontology_enrichment_celltype=CL:0000990!4.20e-41!8;CL:0000451!1.67e-33!10;CL:0000453!9.98e-25!5;CL:0000738!7.74e-22!140;CL:0000840!7.21e-21!5;CL:0001029!7.21e-21!5;CL:0000945!2.09e-18!24;CL:0000826!2.09e-18!24;CL:0002032!5.91e-18!165;CL:0000837!5.91e-18!165;CL:0000037!4.55e-17!172;CL:0000566!4.55e-17!172;CL:0002087!8.98e-17!119;CL:0002031!5.03e-16!124;CL:0000988!6.43e-16!182;CL:0000542!7.43e-15!53;CL:0000051!7.43e-15!53;CL:0000838!1.61e-12!52;CL:0000235!2.04e-12!10;CL:0000946!1.53e-08!1;CL:0000786!1.53e-08!1;CL:0000980!1.53e-08!1;CL:0000134!6.00e-07!358;CL:0002320!9.84e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000990;1.47e-82;8!CL:0000451;1.56e-67;10!CL:0000453;9.19e-49;5!CL:0000840;2.21e-41;5!CL:0000235;1.27e-40;6!CL:0001014;6.17e-09;2!CL:0001016;6.17e-09;2!CL:0000738;8.54e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.47e-82,8;CL:0000451,1.56e-67,10;CL:0000453,7.64e-49,5;CL:0000840,3.02e-41,5;CL:0001029,3.02e-41,5;CL:0000235,1.28e-40,6;CL:0000738,9.17e-18,136;CL:0000763,5.61e-16,108;CL:0000049,5.61e-16,108;CL:0002009,3.63e-15,61;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000557,8.94e-14,67;CL:0000988,2.02e-13,177;CL:0002194,4.36e-12,59;CL:0000576,4.36e-12,59;CL:0000040,4.36e-12,59;CL:0000559,4.36e-12,59;CL:0002031,1.04e-11,120;CL:0000839,8.92e-11,66;CL:0002087,6.91e-10,115;CL:0000766,7.51e-10,72;CL:0001014,6.94e-09,2;CL:0001016,6.94e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!5.99e-12!10;DOID:0060060!7.18e-09!1;DOID:0060061!7.18e-09!1;DOID:8691!7.18e-09!1;DOID:630!8.36e-09!1;DOID:0050177!8.36e-09!1;DOID:0050427!8.36e-09!1;DOID:12603!1.65e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.63e-16;1!DOID:0060061;2.63e-16;1!DOID:8691;2.63e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.63e-16,1;DOID:0060061,2.63e-16,1;DOID:8691,2.63e-16,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.32e-12,76;UBERON:0001474,3.60e-11,82;UBERON:0004765,3.95e-10,90;UBERON:0002405,8.75e-10,93;UBERON:0002390,2.96e-09,98;UBERON:0003061,2.96e-09,98;UBERON:0001434,4.66e-09,100;UBERON:0002193,2.43e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.492603536699674,0.314843125254717,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,3.24547393654683,9.40300581416043,17.6834087490091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10603838625314,3.86441021950693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41753560563109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72804432375144,1.99297260470045,9.48679286683896,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p@chr16:57398312..57398334,- | |||
}} |
Revision as of 11:38, 20 January 2014
Short description: | p@chr16:57398312..57398334, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57398312..57398334, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.47e-82 | 8 |
dendritic cell | 1.56e-67 | 10 |
Langerhans cell | 7.64e-49 | 5 |
immature conventional dendritic cell | 3.02e-41 | 5 |
common dendritic progenitor | 3.02e-41 | 5 |
macrophage | 1.28e-40 | 6 |
leukocyte | 9.17e-18 | 136 |
myeloid cell | 5.61e-16 | 108 |
common myeloid progenitor | 5.61e-16 | 108 |
macrophage dendritic cell progenitor | 3.63e-15 | 61 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
granulocyte monocyte progenitor cell | 8.94e-14 | 67 |
hematopoietic cell | 2.02e-13 | 177 |
monopoietic cell | 4.36e-12 | 59 |
monocyte | 4.36e-12 | 59 |
monoblast | 4.36e-12 | 59 |
promonocyte | 4.36e-12 | 59 |
hematopoietic lineage restricted progenitor cell | 1.04e-11 | 120 |
myeloid lineage restricted progenitor cell | 8.92e-11 | 66 |
nongranular leukocyte | 6.91e-10 | 115 |
myeloid leukocyte | 7.51e-10 | 72 |
CD1a-positive Langerhans cell | 6.94e-09 | 2 |
immature CD1a-positive Langerhans cell | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.32e-12 | 76 |
bone element | 3.60e-11 | 82 |
skeletal element | 3.95e-10 | 90 |
immune system | 8.75e-10 | 93 |
hematopoietic system | 2.96e-09 | 98 |
blood island | 2.96e-09 | 98 |
skeletal system | 4.66e-09 | 100 |
hemolymphoid system | 2.43e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.63e-16 | 1 |
cutaneous T cell lymphoma | 2.63e-16 | 1 |
mycosis fungoides | 2.63e-16 | 1 |