FFCP PHASE1:Hg19::chr16:30080170..30080194,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=414 | |||
|TSSclassifier=strong | |||
|UniProt=A4UCT0,P04075 | |||
|association_with_transcript=0bp_to_EF036497,M21190_5end | |||
|coexpression_cluster_id=C1219 | |||
|description=CAGE_peak_16_at_ALDOA_5end | |||
|id=chr16:30080170..30080194,+ | |||
|ontology_enrichment_celltype=CL:0000222!8.94e-12!119;CL:0000359!7.86e-11!32;CL:0000183!1.29e-10!59;CL:0000192!2.12e-10!42;CL:0000514!2.12e-10!42;CL:0000393!3.30e-10!60;CL:0000211!3.30e-10!60;CL:0000680!6.54e-10!57;CL:0000056!6.54e-10!57;CL:0000355!6.54e-10!57;CL:0000187!1.24e-09!54;CL:0000055!2.71e-07!180;CL:0000220!7.39e-07!246;CL:0002321!9.38e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.25e-11;32!CL:0000192;1.04e-08;43!CL:0000473;1.19e-07;39!CL:0000234;1.19e-07;39!CL:0000860;4.27e-07;33!CL:0002057;4.27e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.42e-12,32;CL:0000192,1.31e-11,43;CL:0000514,1.31e-11,43;CL:0000393,9.96e-11,61;CL:0000211,9.96e-11,61;CL:0000680,5.12e-10,58;CL:0000056,5.12e-10,58;CL:0000355,5.12e-10,58;CL:0000187,6.58e-10,55;CL:0000222,1.39e-09,121;CL:0000473,4.57e-08,48;CL:0000234,4.57e-08,48 | |||
|ontology_enrichment_development_v019=CL:0000514;1.04e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!9.02e-13!42;UBERON:0003509!9.02e-13!42;UBERON:0004572!9.02e-13!42;UBERON:0004290!1.07e-12!70;UBERON:0001134!6.25e-12!61;UBERON:0002036!6.25e-12!61;UBERON:0003082!6.25e-12!61;UBERON:0000486!9.30e-12!82;UBERON:0002385!2.77e-11!63;UBERON:0001015!2.77e-11!63;UBERON:0000383!2.77e-11!63;UBERON:0000914!1.75e-10!83;UBERON:0002329!1.75e-10!83;UBERON:0003077!1.75e-10!83;UBERON:0003059!1.75e-10!83;UBERON:0007282!1.75e-10!83;UBERON:0009618!1.75e-10!83;UBERON:0007285!1.75e-10!83;UBERON:0001981!2.77e-10!60;UBERON:0007500!2.77e-10!60;UBERON:0004537!2.77e-10!60;UBERON:0006965!2.77e-10!60;UBERON:0002204!7.75e-10!167;UBERON:0004573!8.32e-10!33;UBERON:0004571!8.32e-10!33;UBERON:0004872!1.32e-08!84;UBERON:0000055!2.13e-08!69;UBERON:0003081!1.49e-07!216;UBERON:0002049!2.28e-07!79;UBERON:0007798!2.28e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.84e-09;42!UBERON:0003509;3.84e-09;42!UBERON:0004572;3.84e-09;42!UBERON:0004573;6.65e-09;33!UBERON:0004571;6.65e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.92e-13,78;UBERON:0001637,2.49e-13,42;UBERON:0003509,2.49e-13,42;UBERON:0004572,2.49e-13,42;UBERON:0001134,2.10e-12,62;UBERON:0002036,2.10e-12,62;UBERON:0003082,2.10e-12,62;UBERON:0002204,3.04e-12,167;UBERON:0002329,5.06e-12,71;UBERON:0003059,5.06e-12,71;UBERON:0007282,5.06e-12,71;UBERON:0004290,5.06e-12,71;UBERON:0009618,5.06e-12,71;UBERON:0007524,8.69e-12,73;UBERON:0000486,1.06e-11,83;UBERON:0003077,1.31e-11,72;UBERON:0007285,1.31e-11,72;UBERON:0002385,1.68e-11,64;UBERON:0001015,1.68e-11,64;UBERON:0000383,1.68e-11,64;UBERON:0004573,4.30e-10,33;UBERON:0004571,4.30e-10,33;UBERON:0003081,5.59e-09,203;UBERON:0000926,6.55e-09,315;UBERON:0004120,6.55e-09,315;UBERON:0006603,6.55e-09,315;UBERON:0007500,7.22e-09,59;UBERON:0001981,7.22e-09,59;UBERON:0004537,7.22e-09,59;UBERON:0006965,7.22e-09,59;UBERON:0005256,2.11e-08,122;UBERON:0004872,1.44e-07,83 | |||
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| |||
|short_description=p16@ALDOA | |||
}} |
Revision as of 03:08, 12 January 2014
Short description: | p16@ALDOA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ALDOA_5end |
Coexpression cluster: | C1219_Smooth_Tracheal_penis_tongue_skeletal_leiomyoma_diaphragm |
Association with transcript: | 0bp_to_EF036497, M21190_5end |
EntrezGene: | ALDOA |
HGNC: | 414 |
UniProt: | A4UCT0P04075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.42e-12 | 32 |
smooth muscle cell | 1.31e-11 | 43 |
smooth muscle myoblast | 1.31e-11 | 43 |
electrically responsive cell | 9.96e-11 | 61 |
electrically active cell | 9.96e-11 | 61 |
muscle precursor cell | 5.12e-10 | 58 |
myoblast | 5.12e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.12e-10 | 58 |
muscle cell | 6.58e-10 | 55 |
mesodermal cell | 1.39e-09 | 121 |
defensive cell | 4.57e-08 | 48 |
phagocyte | 4.57e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.92e-13 | 78 |
artery | 2.49e-13 | 42 |
arterial blood vessel | 2.49e-13 | 42 |
arterial system | 2.49e-13 | 42 |
skeletal muscle tissue | 2.10e-12 | 62 |
striated muscle tissue | 2.10e-12 | 62 |
myotome | 2.10e-12 | 62 |
musculoskeletal system | 3.04e-12 | 167 |
somite | 5.06e-12 | 71 |
presomitic mesoderm | 5.06e-12 | 71 |
presumptive segmental plate | 5.06e-12 | 71 |
dermomyotome | 5.06e-12 | 71 |
trunk paraxial mesoderm | 5.06e-12 | 71 |
dense mesenchyme tissue | 8.69e-12 | 73 |
multilaminar epithelium | 1.06e-11 | 83 |
paraxial mesoderm | 1.31e-11 | 72 |
presumptive paraxial mesoderm | 1.31e-11 | 72 |
muscle tissue | 1.68e-11 | 64 |
musculature | 1.68e-11 | 64 |
musculature of body | 1.68e-11 | 64 |
systemic artery | 4.30e-10 | 33 |
systemic arterial system | 4.30e-10 | 33 |
lateral plate mesoderm | 5.59e-09 | 203 |
mesoderm | 6.55e-09 | 315 |
mesoderm-derived structure | 6.55e-09 | 315 |
presumptive mesoderm | 6.55e-09 | 315 |
epithelial tube open at both ends | 7.22e-09 | 59 |
blood vessel | 7.22e-09 | 59 |
blood vasculature | 7.22e-09 | 59 |
vascular cord | 7.22e-09 | 59 |
trunk mesenchyme | 2.11e-08 | 122 |
splanchnic layer of lateral plate mesoderm | 1.44e-07 | 83 |