FFCP PHASE1:Hg19::chr16:24060399..24060400,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2366 | |||
|description=CAGE_peak_at_chr16:24060399..24060400,+ | |||
|id=chr16:24060399..24060400,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.51e-47!172;CL:0000566!1.51e-47!172;CL:0002032!7.00e-46!165;CL:0000837!7.00e-46!165;CL:0000988!1.29e-44!182;CL:0000738!4.01e-36!140;CL:0002031!6.05e-33!124;CL:0002087!1.40e-32!119;CL:0000763!7.24e-24!112;CL:0000049!7.24e-24!112;CL:0000838!2.08e-21!52;CL:0000542!1.16e-20!53;CL:0000051!1.16e-20!53;CL:0000766!5.95e-15!76;CL:0002057!1.77e-14!42;CL:0000945!3.35e-14!24;CL:0000826!3.35e-14!24;CL:0000839!1.02e-12!70;CL:0000860!1.17e-12!45;CL:0000557!2.16e-12!71;CL:0002194!3.47e-11!63;CL:0000576!3.47e-11!63;CL:0000040!3.47e-11!63;CL:0000559!3.47e-11!63;CL:0002009!4.16e-11!65;CL:0000236!3.91e-10!14;CL:0000791!6.71e-10!18;CL:0000789!6.71e-10!18;CL:0002420!6.71e-10!18;CL:0002419!6.71e-10!18;CL:0000790!6.71e-10!18;CL:0002393!3.45e-07!9;CL:0002397!3.45e-07!9;CL:0000084!3.61e-07!25;CL:0000827!3.61e-07!25;CL:0000625!4.53e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.17e-17;24!CL:0000236;7.18e-13;13!CL:0000542;5.22e-12;53!CL:0002087;3.20e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.29e-31,168;CL:0002032,5.90e-30,161;CL:0000837,5.90e-30,161;CL:0000988,4.11e-28,177;CL:0002087,2.03e-24,115;CL:0000738,4.81e-24,136;CL:0002031,1.79e-21,120;CL:0000838,2.71e-19,52;CL:0000542,9.90e-19,53;CL:0000051,9.90e-19,53;CL:0000945,1.21e-17,24;CL:0000826,1.21e-17,24;CL:0000236,9.11e-14,14;CL:0000763,1.40e-12,108;CL:0000049,1.40e-12,108;CL:0000766,4.56e-08,72;CL:0000473,1.32e-07,48;CL:0000234,1.32e-07,48;CL:0000860,1.73e-07,42;CL:0002057,1.73e-07,42;CL:0002393,4.86e-07,9;CL:0002397,4.86e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;5.22e-12;53 | |||
|ontology_enrichment_disease=DOID:8692!6.06e-11!31;DOID:2531!5.40e-09!51;DOID:0060083!5.40e-09!51;DOID:1240!2.30e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.85e-08;8!DOID:8692;2.78e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.62e-08,8;DOID:8692,4.34e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.12e-32!115;UBERON:0002390!1.89e-20!102;UBERON:0003061!1.89e-20!102;UBERON:0002193!3.39e-18!112;UBERON:0001049!4.20e-18!57;UBERON:0005068!4.20e-18!57;UBERON:0006241!4.20e-18!57;UBERON:0007135!4.20e-18!57;UBERON:0001893!1.38e-16!34;UBERON:0002020!3.23e-16!34;UBERON:0003528!3.23e-16!34;UBERON:0002780!5.53e-16!41;UBERON:0001890!5.53e-16!41;UBERON:0006240!5.53e-16!41;UBERON:0002791!5.76e-16!33;UBERON:0001869!1.38e-15!32;UBERON:0003080!2.72e-15!42;UBERON:0002616!1.23e-14!59;UBERON:0001950!2.32e-14!20;UBERON:0002619!5.05e-14!22;UBERON:0002346!1.36e-12!90;UBERON:0001017!3.79e-12!82;UBERON:0000955!1.42e-11!69;UBERON:0006238!1.42e-11!69;UBERON:0005743!1.96e-11!86;UBERON:0000956!2.15e-11!25;UBERON:0000203!2.15e-11!25;UBERON:0000073!1.12e-10!94;UBERON:0001016!1.12e-10!94;UBERON:0000178!1.25e-10!15;UBERON:0000179!1.25e-10!15;UBERON:0000463!1.25e-10!15;UBERON:0003075!1.89e-10!86;UBERON:0007284!1.89e-10!86;UBERON:0002371!2.29e-10!80;UBERON:0001474!1.31e-08!86;UBERON:0002405!2.01e-08!115;UBERON:0003056!6.62e-08!61;UBERON:0002420!5.68e-07!9;UBERON:0007245!5.68e-07!9;UBERON:0010009!5.68e-07!9;UBERON:0010011!5.68e-07!9;UBERON:0000454!5.68e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.83e-21;34!UBERON:0001950;1.19e-20;20!UBERON:0002619;1.66e-20;22!UBERON:0001869;5.24e-20;32!UBERON:0002791;5.71e-20;32!UBERON:0003528;2.22e-19;34!UBERON:0002020;2.22e-19;34!UBERON:0000956;2.26e-17;25!UBERON:0000203;2.26e-17;25!UBERON:0002780;2.09e-15;41!UBERON:0001890;2.09e-15;41!UBERON:0000073;1.43e-13;53!UBERON:0002616;1.43e-13;53!UBERON:0000178;1.73e-11;15!UBERON:0000179;1.73e-11;15!UBERON:0000463;1.73e-11;15!UBERON:0000955;1.65e-08;68!UBERON:0000200;1.80e-08;6!UBERON:0002420;2.39e-08;9!UBERON:0007245;2.39e-08;9!UBERON:0010009;2.39e-08;9!UBERON:0010011;2.39e-08;9!UBERON:0000454;2.39e-08;9!UBERON:0001872;1.21e-07;5!UBERON:0001017;2.78e-07;75!UBERON:0002346;4.69e-07;4!UBERON:0000923;4.69e-07;4!UBERON:0010316;4.69e-07;4!UBERON:0005291;4.69e-07;4!UBERON:0002390;5.97e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,3.58e-24,34;UBERON:0000073,7.31e-24,53;UBERON:0002616,7.31e-24,53;UBERON:0001869,1.36e-22,32;UBERON:0002791,1.90e-22,32;UBERON:0003528,2.21e-22,34;UBERON:0002020,2.21e-22,34;UBERON:0001049,5.64e-22,56;UBERON:0005068,5.64e-22,56;UBERON:0006241,5.64e-22,56;UBERON:0007135,5.64e-22,56;UBERON:0002780,9.15e-22,41;UBERON:0001890,9.15e-22,41;UBERON:0003080,9.15e-22,41;UBERON:0006240,9.15e-22,41;UBERON:0001950,1.42e-20,20;UBERON:0002619,1.84e-20,22;UBERON:0007023,7.12e-19,114;UBERON:0000956,2.46e-17,25;UBERON:0000203,2.46e-17,25;UBERON:0000955,5.06e-17,68;UBERON:0006238,5.06e-17,68;UBERON:0002346,1.64e-16,86;UBERON:0001017,1.88e-13,81;UBERON:0003075,2.73e-13,82;UBERON:0007284,2.73e-13,82;UBERON:0001016,1.03e-12,89;UBERON:0003056,1.13e-12,61;UBERON:0002390,6.18e-12,98;UBERON:0003061,6.18e-12,98;UBERON:0000178,9.86e-12,15;UBERON:0000179,9.86e-12,15;UBERON:0000463,9.86e-12,15;UBERON:0002193,2.63e-11,108;UBERON:0000200,1.13e-08,6;UBERON:0002420,1.54e-08,9;UBERON:0007245,1.54e-08,9;UBERON:0010009,1.54e-08,9;UBERON:0010011,1.54e-08,9;UBERON:0000454,1.54e-08,9;UBERON:0010371,2.61e-08,104;UBERON:0001872,1.53e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2857764471619,2.21671591514854,4.25038219093868,0.393364276848904,1.91914699048606,0.619264493264304,0,0,0,1.31694240986513,2.98555388223585,0.587200878669695,3.87796785972314,3.00816671205213,3.25516306073778,1.11957737119962,0.971680998056939,0,1.45398238779565,0.377875943688809,2.66842467306598,0.232429036905685,1.23350366406548,1.54853185447552,0.28769239232215,0,0.709446689665756,1.03423704220986,1.93645405075148,0,0.376484679085209,1.91034305040492,0.674170453335254,0,0.320929027076094,1.27867425159808,0,0.199463657621632,0.426224750532694,0.290209238628584,1.13477044938228,0.622822248995575,1.00499466102697,0.521482918420201,0.434377689410233,1.21079900526674,0.736555271975129,1.26584954976354,0.845021145247767,1.27562579979026,2.93522103711726,1.01095768031846,0.901061357049038,1.6072558669708,0.855038231223746,1.9891667719909,3.65328307529268,5.27988733383968,5.46138611262132,3.55803701545422,3.84057200309856,4.40435585739614,4.02326707968138,0.661044872784862,4.77026877267682,6.83055562931338,3.52342313622563,5.3518251937532,0,1.68152568894461,0.526768169550154,2.55722701147983,5.10913991573914,1.23360899399706,0.668745981562712,0.32592226663359,0.473447805734733,0,0.334231370655521,0.883817722424512,0.664601683750863,1.08321545506006,0.640456598628376,0.910415432919148,0.822189523018381,0.552700035571697,0.579606171470105,0.296573126324121,0.802622484269139,1.04535523804977,1.0197840842781,0.383220493601921,0.68725489096526,1.77113784413652,0.637130828648193,3.25541726928209,0.950452044448374,0.301150238155546,0.511946444617674,1.24930726552346,1.89421801635213,0.821127996921047,3.22570789159572,4.01160293675261,5.21367853978076,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,1.19245312152671,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,1.47730203652438,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.792435906119034,0.414656231081544,1.72943944100354,1.2624243342638,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,3.64871341923571,0,0,0,0,0,0,0,0,0.448340575974109,1.77327684181734,3.01878604803324,4.36366323351144,0,1.30139853857622,0,0.167516265334349,0,4.49404214368309,11.966458368161,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,3.3082884179662,1.94142780736755,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.12972560932135,0,0,0,0,2.02979043692868,3.82318603571188,5.69647187174163,3.81170840732462,2.87953591160336,3.24236655596359,5.94034580961926,1.58625035258854,0,0,0,0,0,0,0,0,0.383010740264733,1.05836791361941,0,0.280797178113459,2.9670508274315,0.47003968731907,5.01268954180134,1.69291777801603,0.802940375518498,0.201799707191048,0.425846237690326,1.03051603426729,0.921722292925374,0.447352215784832,0,0.781552381608161,1.67043704337145,1.23087398947712,1.08182271390393,0,4.22961015263549,0,0,0,0,0,0,0.296964680832639,0,2.98244294329889,1.26602474769461,0,0,0,0.19924798825107,1.10513566212459,0,0,1.10776324914963,0,0,0,0.511572370226872,0.0986434056369336,4.7896618469388,0,3.87733098438087,0.649376687132959,0,0,0,0,0,0,0,0.344743373241465,3.49925536059905,0,2.65722415744152,3.37670028151142,1.52581736317083,1.54810963903714,1.77328571372128,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,1.16348177330109,2.48155226678899,3.52912561771931,6.20939871810618,7.21064184351903,1.11255605286265,0,0,0,0,1.99052386215701,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.626531697032732,1.14581926067151,0,0.937057782901357,1.094728735294,0,0,0,3.62972148145992,0,0.505492637027904,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,2.21587785845575,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.547621515567972,0,0,0,0.837847203816763,0.458320848023367,1.43574604915363,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0.931406652723629,0,2.72406812223151,0.321506296930038,0.412618309791701,0,0,0.77380195455795,2.00473536971481,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,7.71669695043786,0,0,0.146552233678082,0,0.387848869084652,1.45455861916959,0,0,0.427149650270779,0.628817220398664,0.828478110694391,2.48083010905975,0,0,0,0,0,0,0,0,5.31640907980192,1.34228891392159,6.00916467391199,1.14681839138014,1.10929051536852,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56252839300712,0,0.132864840313363,0.327130788511688,0,0,0,0.59996218756479,0.106691729694141,0.344429959321631,0,0,0,0,0,0,2.35898912783845,0,2.0367903594483,10.2035961648808,8.92337502664816,0.558644917973244,0,0,0,0,0,2.376481328569,8.5017945795351,7.66242523474326,2.05116364240755,0.504143392443436,1.24483054435592,4.19836678642813,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95858995393344,4.68646859168308,5.37385670903079,2.09272173639893,2.18789923607288,0.548257766857182,0.992422356778588,4.57265235335014,0,0,0,0,0.227662191351298,0.0887023701626388,1.95897778844825,0.171488009437418,0.543757863814654,2.43359262182542,0,0,0.863424021355654,2.82808061848803,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.308696632431779,0.874238242015829,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,1.59772660565751,2.57831551894309,2.59847005404815,0,0,0,0.730336388246517,0.458729283404541,1.29005624836306,0,1.90376172534561,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.803892390468535,1.65833887891756,1.96522692137601,1.0661699095049,0.23806443146374,0.710478008196067,2.91751157190532,0,0,0.202117188958219,0,0,2.22261774948139,0.573777643141411,0,0,0,0,0,0,0.122241444182866,0,0,1.61019034872821,2.56454793842586 | |||
|short_description=p@chr16:24060399..24060400,+ | |||
}} |
Revision as of 02:48, 12 January 2014
Short description: | p@chr16:24060399..24060400, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:24060399..24060400, + |
Coexpression cluster: | C2366_Neutrophils_Eosinophils_leukemia_CD19_caudate_granulocyte_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.29e-31 | 168 |
hematopoietic oligopotent progenitor cell | 5.90e-30 | 161 |
hematopoietic multipotent progenitor cell | 5.90e-30 | 161 |
hematopoietic cell | 4.11e-28 | 177 |
nongranular leukocyte | 2.03e-24 | 115 |
leukocyte | 4.81e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 1.79e-21 | 120 |
lymphoid lineage restricted progenitor cell | 2.71e-19 | 52 |
lymphocyte | 9.90e-19 | 53 |
common lymphoid progenitor | 9.90e-19 | 53 |
lymphocyte of B lineage | 1.21e-17 | 24 |
pro-B cell | 1.21e-17 | 24 |
B cell | 9.11e-14 | 14 |
myeloid cell | 1.40e-12 | 108 |
common myeloid progenitor | 1.40e-12 | 108 |
myeloid leukocyte | 4.56e-08 | 72 |
defensive cell | 1.32e-07 | 48 |
phagocyte | 1.32e-07 | 48 |
classical monocyte | 1.73e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-07 | 42 |
intermediate monocyte | 4.86e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.86e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.62e-08 | 8 |
myeloid leukemia | 4.34e-07 | 31 |