Personal tools

FFCP PHASE1:Hg19::chr16:11301790..11301804,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=133bp_to_AK127887_5end|coexpression_cluster_id=C205|description=CAGE_peak_1_at_AK127887_5end|id=chr16:11301790..11301804,+|ontology_enrichment_celltype=CL:0000838!2.69e-15!52;CL:0000542!5.21e-15!53;CL:0000051!5.21e-15!53;CL:0000084!1.43e-14!25;CL:0000827!1.43e-14!25;CL:0002087!1.42e-11!119;CL:0002031!4.22e-11!124;CL:0000738!8.22e-10!140;CL:0002032!2.74e-08!165;CL:0000837!2.74e-08!165;CL:0000037!6.13e-08!172;CL:0000566!6.13e-08!172;CL:0000988!1.74e-07!182|ontology_enrichment_celltype_v019=CL:0000084;1.09e-11;25!CL:0000542;4.60e-09;53|ontology_enrichment_celltype_v019_2=CL:0000838,1.77e-12,52;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53;CL:0000084,1.09e-11,25;CL:0000827,1.09e-11,25|ontology_enrichment_development_v019=CL:0000051;4.60e-09;53|ontology_enrichment_disease=DOID:0060058!9.56e-36!10;DOID:0060060!1.07e-23!1;DOID:0060061!1.07e-23!1;DOID:8691!1.07e-23!1;DOID:2355!1.34e-23!1;DOID:74!1.65e-12!2;DOID:2531!4.68e-11!51;DOID:0060083!4.68e-11!51;DOID:1287!6.87e-07!4|ontology_enrichment_disease_v019=DOID:0060060;1.23e-66;1!DOID:0060061;1.23e-66;1!DOID:8691;1.23e-66;1!DOID:2355;2.39e-66;1!DOID:0060058;1.10e-59;10!DOID:74;5.04e-34;2!DOID:1287;8.69e-18;4!DOID:2531;4.24e-08;51!DOID:0060083;4.24e-08;51|ontology_enrichment_disease_v019_2=DOID:0060060,1.23e-66,1;DOID:0060061,1.23e-66,1;DOID:8691,1.23e-66,1;DOID:2355,2.39e-66,1;DOID:0060058,1.10e-59,10;DOID:74,5.04e-34,2;DOID:1287,8.69e-18,4;DOID:2531,1.06e-12,51;DOID:0060083,1.06e-12,51|ontology_enrichment_uberon=UBERON:0003343!9.63e-07!4;UBERON:0004785!9.63e-07!4|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,3.95529298144223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,16.087933092499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1986009398972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@AK127887}}
{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=
|TSSclassifier=not
|UniProt=
|association_with_transcript=133bp_to_AK127887_5end
|coexpression_cluster_id=C205
|description=CAGE_peak_1_at_AK127887_5end
|id=chr16:11301790..11301804,+
|ontology_enrichment_celltype=CL:0000838!2.69e-15!52;CL:0000542!5.21e-15!53;CL:0000051!5.21e-15!53;CL:0000084!1.43e-14!25;CL:0000827!1.43e-14!25;CL:0002087!1.42e-11!119;CL:0002031!4.22e-11!124;CL:0000738!8.22e-10!140;CL:0002032!2.74e-08!165;CL:0000837!2.74e-08!165;CL:0000037!6.13e-08!172;CL:0000566!6.13e-08!172;CL:0000988!1.74e-07!182
|ontology_enrichment_celltype_v019=CL:0000084;1.09e-11;25!CL:0000542;4.60e-09;53
|ontology_enrichment_celltype_v019_2=CL:0000838,1.77e-12,52;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53;CL:0000084,1.09e-11,25;CL:0000827,1.09e-11,25
|ontology_enrichment_development_v019=CL:0000051;4.60e-09;53
|ontology_enrichment_disease=DOID:0060058!9.56e-36!10;DOID:0060060!1.07e-23!1;DOID:0060061!1.07e-23!1;DOID:8691!1.07e-23!1;DOID:2355!1.34e-23!1;DOID:74!1.65e-12!2;DOID:2531!4.68e-11!51;DOID:0060083!4.68e-11!51;DOID:1287!6.87e-07!4
|ontology_enrichment_disease_v019=DOID:0060060;1.23e-66;1!DOID:0060061;1.23e-66;1!DOID:8691;1.23e-66;1!DOID:2355;2.39e-66;1!DOID:0060058;1.10e-59;10!DOID:74;5.04e-34;2!DOID:1287;8.69e-18;4!DOID:2531;4.24e-08;51!DOID:0060083;4.24e-08;51
|ontology_enrichment_disease_v019_2=DOID:0060060,1.23e-66,1;DOID:0060061,1.23e-66,1;DOID:8691,1.23e-66,1;DOID:2355,2.39e-66,1;DOID:0060058,1.10e-59,10;DOID:74,5.04e-34,2;DOID:1287,8.69e-18,4;DOID:2531,1.06e-12,51;DOID:0060083,1.06e-12,51
|ontology_enrichment_uberon=UBERON:0003343!9.63e-07!4;UBERON:0004785!9.63e-07!4
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,3.95529298144223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,16.087933092499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1986009398972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p1@AK127887
}}

Revision as of 02:20, 12 January 2014

Short description:p1@AK127887
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_AK127887_5end
Coexpression cluster:C205_mycosis_cord_hairy_xeroderma_CD4_B_b
Association with transcript: 133bp_to_AK127887_5end
EntrezGene:NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
5
10
15
20
25




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr16:11301790..11301804,%2B&oldid=3143475"