FFCP PHASE1:Hg19::chr16:4897431..4897520,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12506 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPG3 | |||
|association_with_transcript=-391bp_to_ENST00000262376,ENST00000545171,NM_001079514,uc002cyb.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_UBN1_5end | |||
|id=chr16:4897431..4897520,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.19e-22!76;CL:0002057!1.64e-18!42;CL:0000557!3.45e-18!71;CL:0000763!3.82e-18!112;CL:0000049!3.82e-18!112;CL:0000839!4.21e-18!70;CL:0000860!7.09e-18!45;CL:0002009!4.64e-17!65;CL:0002194!4.95e-17!63;CL:0000576!4.95e-17!63;CL:0000040!4.95e-17!63;CL:0000559!4.95e-17!63;CL:0000738!1.19e-12!140;CL:0000037!3.16e-12!172;CL:0000566!3.16e-12!172;CL:0000988!8.95e-12!182;CL:0002032!2.63e-11!165;CL:0000837!2.63e-11!165;CL:0002031!8.21e-10!124;CL:0002087!2.71e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.41e-16;33!CL:0002057;8.41e-16;33!CL:0000576;2.66e-12;48!CL:0000473;6.35e-12;39!CL:0000234;6.35e-12;39!CL:0000766;8.21e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.33e-23,72;CL:0000557,2.54e-19,67;CL:0000839,3.02e-19,66;CL:0000763,7.32e-19,108;CL:0000049,7.32e-19,108;CL:0000860,1.64e-18,42;CL:0002057,1.64e-18,42;CL:0002194,3.14e-18,59;CL:0000576,3.14e-18,59;CL:0000040,3.14e-18,59;CL:0000559,3.14e-18,59;CL:0002009,3.19e-18,61;CL:0000473,1.75e-16,48;CL:0000234,1.75e-16,48;CL:0000738,4.63e-13,136;CL:0000037,1.49e-12,168;CL:0000988,8.60e-12,177;CL:0002032,1.27e-11,161;CL:0000837,1.27e-11,161;CL:0002031,3.55e-10,120;CL:0002087,1.18e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;9.94e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.21e-19!102;UBERON:0003061!2.21e-19!102;UBERON:0002193!3.77e-19!112;UBERON:0002405!4.50e-15!115;UBERON:0002371!1.53e-14!80;UBERON:0001474!1.56e-14!86;UBERON:0003081!2.23e-10!216;UBERON:0004765!7.90e-09!101;UBERON:0001434!7.90e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.20e-20,98;UBERON:0003061,3.20e-20,98;UBERON:0002193,6.65e-20,108;UBERON:0002405,4.69e-16,93;UBERON:0002371,2.37e-15,76;UBERON:0001474,2.76e-15,82;UBERON:0003081,5.15e-11,203;UBERON:0004765,1.07e-10,90;UBERON:0001434,2.98e-08,100 | |||
|phase1_expression=13.4442000660212,14.1306345768049,13.8135316014052,10.007329835313,14.3027550216732,11.3404008133048,17.7309914717817,12.0026775951098,17.760622717589,15.9727058725981,13.2582221914761,19.4412821195853,24.7940959534746,6.18831764800233,9.61052389610956,10.7572023432284,7.23233433628772,10.2243412654232,5.85519358548608,20.0687324665164,20.196068433181,18.4938285672072,11.1632034981112,18.7517962349851,16.6971710661088,15.8175749898259,16.4201178899892,19.1267198592241,26.7487708257255,32.2416694401659,30.8084085398991,11.0330546937471,20.482002476921,12.201882335504,18.4371937381118,15.4964463411289,14.6800219667424,31.577738286317,50.3366563150056,37.1088588924107,21.2719700527928,23.9681312854045,24.9848300605161,43.764869872649,50.6353764543005,45.6058035033094,46.7182364180426,53.4518254428374,42.7394791835243,42.003089279034,39.9610702185397,19.6280250807526,33.440331031452,40.0200503821972,39.2736811123591,44.0487074529695,44.7566086094867,24.4948598045142,34.587479837912,34.0184768700659,33.2455305415501,40.5717099229661,45.2782502801104,27.7046087846251,29.6013423401156,44.8234327506,41.7290906827035,43.2147704241598,46.4119797393979,19.9813737128707,32.6915731422019,26.1477121551171,19.6206680213348,16.2666570460195,18.9217826968889,19.2885953867706,26.7342142128658,24.4788335331655,26.3589962183211,26.7911979116774,22.8754178778954,18.8144078377573,15.839662001519,10.9227722252426,9.7846017924991,18.7761297929263,6.80673177961221,13.2193061189531,13.2208974556972,4.77026877267682,38.7064818994425,39.9321288772238,44.3436944625265,22.4691258584344,20.1783082673353,11.8522838148785,31.866982758441,43.2311839024081,34.335450332918,24.409228327039,17.2738801315803,20.3582556465935,13.6378709885538,17.4914417309723,17.0871426335406,19.7165166179423,15.7066240983709,28.1800903396485,24.9713947314966,21.2124896938742,24.3188015651547,18.5473974870434,18.6841069584196,21.1357254190873,21.9524599990451,22.7751778822108,20.6939066545037,21.3049016199231,15.4342012131897,12.4240511586398,10.4173352617027,12.3558765778289,11.5942841689885,12.7986611154418,11.2437653897111,12.0756398542449,13.1380479507367,42.942236306868,52.4182783735674,35.6268033551685,31.694892620815,8.04841031644363,7.67175371061182,15.1804444001518,14.0374614978049,14.0501123391999,4.7717156823066,13.6257763684738,14.5583618432665,17.9600811944677,18.5331397812496,19.9743090134012,19.6719455677973,21.5054976814969,26.9374336733387,31.5174824511674,26.0597602616976,22.6566093090075,18.8758320557442,17.08704506116,18.2861414777369,27.527507043396,25.688397118962,23.7429335608084,33.9794543330024,23.1099155229657,21.3174865867547,29.7179273044728,22.057508286576,25.1040459573503,18.1273192699116,12.1643536914962,24.8943298699133,22.0597848207521,18.6332648012805,20.8961364184747,22.452937262617,21.3961812918312,16.8648301212472,22.7823758296351,23.9994284548834,89.610683856523,131.845289810431,17.8798561378439,11.9273268406876,14.0559867947684,14.5650098894541,36.1414142143505,25.5361235182817,12.3349072031308,11.7423895302675,12.8267125176923,17.4278179823869,17.2429660249201,15.692342698892,21.4927547255803,24.77556475264,32.3363575930639,11.2377627658915,13.1208518955223,16.4393548606981,18.2023472897836,18.9391344910714,16.5731951908653,14.9032545016072,13.3889405869827,20.0452015480985,19.0080457165129,15.5778165445491,11.8320977051943,14.3723628363248,14.3085696860956,18.5175409410507,10.8055005038831,9.2185300384976,10.1140972613676,18.1788051276982,7.59995627172141,25.4733282678184,11.7456563850212,14.6233011800098,20.7062856298238,9.89304280689013,11.5938243020533,12.8420630868797,14.8523172372314,8.67189345934668,21.4568708107497,12.610836113995,12.4467463750485,17.3954700333141,8.36242415289414,9.32583257707682,17.7799984910233,11.4553370648151,16.9214711279512,24.8826360504375,21.4698224680806,18.7072248019925,21.6651604982124,13.8776467981596,21.1686868263981,10.9514672630871,16.724264393015,13.8134921352481,10.6804623447355,7.21879481669586,9.58285080322736,10.9580048550766,10.6044853148732,8.93381179132391,10.6760927605279,11.6262603364437,6.47190279168789,6.27908688401107,8.0796902958742,27.311751821112,23.8411015465858,14.8166644079304,32.3419165048192,22.8159062679296,27.5191620669735,25.9947558939818,19.4243763742446,18.3252773429239,9.09309394582185,22.6085587941769,20.2323155863715,17.7936281168587,14.7215627802062,37.142146805377,22.8785652761507,14.4331342025273,15.9983958865606,14.6760867794777,13.1373467462577,19.9083770407943,21.8792275069788,18.9649055510226,27.4715571870359,22.6519645600406,14.2742601734935,19.7679445844009,9.3733833986777,12.4306774867156,8.93183112627035,12.7173102238045,11.9159914790724,14.9519244874432,1.97065295158377,21.9240600692933,31.3065454466566,28.5357507765584,34.3379418919753,15.5569841015814,24.829247661288,18.7547915536075,20.5286935227246,14.9099864419819,16.5188681814155,14.2913216315289,29.1540819297938,24.4137638546637,20.1680286007613,11.2466392709267,14.30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| |||
|short_description=p1@UBN1 | |||
}} |
Revision as of 02:08, 12 January 2014
Short description: | p1@UBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBN1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -391bp_to_ENST00000262376, ENST00000545171, NM_001079514, uc002cyb.2_5end |
EntrezGene: | UBN1 |
HGNC: | 12506 |
UniProt: | Q9NPG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.33e-23 | 72 |
granulocyte monocyte progenitor cell | 2.54e-19 | 67 |
myeloid lineage restricted progenitor cell | 3.02e-19 | 66 |
myeloid cell | 7.32e-19 | 108 |
common myeloid progenitor | 7.32e-19 | 108 |
classical monocyte | 1.64e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-18 | 42 |
monopoietic cell | 3.14e-18 | 59 |
monocyte | 3.14e-18 | 59 |
monoblast | 3.14e-18 | 59 |
promonocyte | 3.14e-18 | 59 |
macrophage dendritic cell progenitor | 3.19e-18 | 61 |
defensive cell | 1.75e-16 | 48 |
phagocyte | 1.75e-16 | 48 |
leukocyte | 4.63e-13 | 136 |
hematopoietic stem cell | 1.49e-12 | 168 |
hematopoietic cell | 8.60e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.27e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 3.55e-10 | 120 |
nongranular leukocyte | 1.18e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.20e-20 | 98 |
blood island | 3.20e-20 | 98 |
hemolymphoid system | 6.65e-20 | 108 |
immune system | 4.69e-16 | 93 |
bone marrow | 2.37e-15 | 76 |
bone element | 2.76e-15 | 82 |
lateral plate mesoderm | 5.15e-11 | 203 |
skeletal element | 1.07e-10 | 90 |
skeletal system | 2.98e-08 | 100 |