FFCP PHASE1:Hg19::chr16:3072067..3072119,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1761 | |||
|description=CAGE_peak_at_chr16:3072067..3072119,- | |||
|id=chr16:3072067..3072119,- | |||
|ontology_enrichment_celltype=CL:0000548!5.71e-29!679;CL:0000004!5.71e-29!679;CL:0000255!5.71e-29!679;CL:0000012!3.07e-28!682;CL:0000220!6.46e-25!246;CL:0002321!8.58e-25!248;CL:0000066!9.83e-24!254;CL:0000055!1.16e-21!180;CL:0000144!3.07e-19!625;CL:0000003!3.36e-17!722;CL:0002371!2.68e-16!591;CL:0000222!3.81e-15!119;CL:0000063!7.93e-11!578;CL:0000393!1.38e-10!60;CL:0000211!1.38e-10!60;CL:0000057!1.44e-10!75;CL:0000680!1.62e-10!57;CL:0000056!1.62e-10!57;CL:0000355!1.62e-10!57;CL:0000183!5.38e-10!59;CL:0000187!1.44e-09!54;CL:0000192!3.28e-09!42;CL:0000514!3.28e-09!42;CL:0000359!2.23e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.60e-08;32!CL:1000449;2.58e-07;15!CL:0000192;3.47e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.43e-21,250;CL:0000066,6.75e-17,253;CL:0000222,1.06e-12,121;CL:0000057,1.48e-10,76;CL:0000680,1.69e-10,58;CL:0000056,1.69e-10,58;CL:0000355,1.69e-10,58;CL:0000393,3.01e-10,61;CL:0000211,3.01e-10,61;CL:0000187,1.89e-09,55;CL:0000192,3.36e-09,43;CL:0000514,3.36e-09,43;CL:0000359,1.32e-07,32;CL:1000449,1.56e-07,15;CL:1000497,7.68e-07,17;CL:0002518,7.68e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;3.47e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.17e-16!143;UBERON:0002100!4.73e-16!216;UBERON:0000486!5.94e-14!82;UBERON:0003104!4.17e-13!238;UBERON:0009142!4.17e-13!238;UBERON:0000914!1.56e-12!83;UBERON:0002329!1.56e-12!83;UBERON:0003077!1.56e-12!83;UBERON:0003059!1.56e-12!83;UBERON:0007282!1.56e-12!83;UBERON:0009618!1.56e-12!83;UBERON:0007285!1.56e-12!83;UBERON:0000490!1.82e-11!138;UBERON:0004290!3.97e-11!70;UBERON:0003914!1.45e-10!118;UBERON:0000926!3.44e-10!448;UBERON:0004120!3.44e-10!448;UBERON:0006603!3.44e-10!448;UBERON:0000468!4.14e-10!659;UBERON:0000481!2.16e-09!347;UBERON:0000475!4.45e-09!365;UBERON:0001134!4.89e-09!61;UBERON:0002036!4.89e-09!61;UBERON:0003082!4.89e-09!61;UBERON:0000467!6.71e-09!625;UBERON:0000480!6.97e-09!626;UBERON:0002049!1.01e-08!79;UBERON:0007798!1.01e-08!79;UBERON:0000483!1.11e-08!309;UBERON:0000119!1.44e-08!312;UBERON:0002385!2.32e-08!63;UBERON:0001015!2.32e-08!63;UBERON:0000383!2.32e-08!63;UBERON:0001637!7.64e-08!42;UBERON:0003509!7.64e-08!42;UBERON:0004572!7.64e-08!42;UBERON:0000923!9.90e-08!604;UBERON:0005291!9.90e-08!604;UBERON:0006598!9.90e-08!604;UBERON:0002532!9.90e-08!604;UBERON:0002050!1.51e-07!605;UBERON:0005423!1.51e-07!605;UBERON:0000922!3.79e-07!612;UBERON:0004872!4.04e-07!84;UBERON:0009569!5.33e-07!113;UBERON:0001981!6.74e-07!60;UBERON:0007500!6.74e-07!60;UBERON:0004537!6.74e-07!60;UBERON:0006965!6.74e-07!60;UBERON:0000055!9.31e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.58e-07;15!UBERON:0004819;2.58e-07;15!UBERON:0001285;2.58e-07;15!UBERON:0007684;2.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.29e-13,83;UBERON:0007503,1.60e-13,78;UBERON:0005256,2.42e-11,122;UBERON:0003104,2.57e-11,160;UBERON:0009142,2.57e-11,160;UBERON:0007524,3.50e-11,73;UBERON:0002329,3.89e-11,71;UBERON:0003059,3.89e-11,71;UBERON:0007282,3.89e-11,71;UBERON:0004290,3.89e-11,71;UBERON:0009618,3.89e-11,71;UBERON:0003077,1.01e-10,72;UBERON:0007285,1.01e-10,72;UBERON:0002100,1.67e-10,199;UBERON:0000490,3.05e-10,148;UBERON:0000483,5.22e-09,306;UBERON:0000119,7.84e-09,309;UBERON:0001134,8.17e-09,62;UBERON:0002036,8.17e-09,62;UBERON:0003082,8.17e-09,62;UBERON:0003914,3.86e-08,117;UBERON:0002385,4.48e-08,64;UBERON:0001015,4.48e-08,64;UBERON:0000383,4.48e-08,64;UBERON:0004211,1.56e-07,15;UBERON:0009773,1.56e-07,15;UBERON:0001231,1.56e-07,15;UBERON:0001285,1.56e-07,15;UBERON:0007684,1.56e-07,15;UBERON:0004208,1.56e-07,15;UBERON:0006554,9.05e-07,47 | |||
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| |||
|short_description=p@chr16:3072067..3072119,- | |||
}} |
Revision as of 01:59, 12 January 2014
Short description: | p@chr16:3072067..3072119, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3072067..3072119, - |
Coexpression cluster: | C1761_Placental_Alveolar_Smooth_Fibroblast_mesothelioma_Renal_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.43e-21 | 250 |
epithelial cell | 6.75e-17 | 253 |
mesodermal cell | 1.06e-12 | 121 |
fibroblast | 1.48e-10 | 76 |
muscle precursor cell | 1.69e-10 | 58 |
myoblast | 1.69e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-10 | 58 |
electrically responsive cell | 3.01e-10 | 61 |
electrically active cell | 3.01e-10 | 61 |
muscle cell | 1.89e-09 | 55 |
smooth muscle cell | 3.36e-09 | 43 |
smooth muscle myoblast | 3.36e-09 | 43 |
vascular associated smooth muscle cell | 1.32e-07 | 32 |
epithelial cell of nephron | 1.56e-07 | 15 |
kidney cell | 7.68e-07 | 17 |
kidney epithelial cell | 7.68e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.29e-13 | 83 |
epithelial vesicle | 1.60e-13 | 78 |
trunk mesenchyme | 2.42e-11 | 122 |
mesenchyme | 2.57e-11 | 160 |
entire embryonic mesenchyme | 2.57e-11 | 160 |
dense mesenchyme tissue | 3.50e-11 | 73 |
somite | 3.89e-11 | 71 |
presomitic mesoderm | 3.89e-11 | 71 |
presumptive segmental plate | 3.89e-11 | 71 |
dermomyotome | 3.89e-11 | 71 |
trunk paraxial mesoderm | 3.89e-11 | 71 |
paraxial mesoderm | 1.01e-10 | 72 |
presumptive paraxial mesoderm | 1.01e-10 | 72 |
trunk | 1.67e-10 | 199 |
unilaminar epithelium | 3.05e-10 | 148 |
epithelium | 5.22e-09 | 306 |
cell layer | 7.84e-09 | 309 |
skeletal muscle tissue | 8.17e-09 | 62 |
striated muscle tissue | 8.17e-09 | 62 |
myotome | 8.17e-09 | 62 |
epithelial tube | 3.86e-08 | 117 |
muscle tissue | 4.48e-08 | 64 |
musculature | 4.48e-08 | 64 |
musculature of body | 4.48e-08 | 64 |
nephron epithelium | 1.56e-07 | 15 |
renal tubule | 1.56e-07 | 15 |
nephron tubule | 1.56e-07 | 15 |
nephron | 1.56e-07 | 15 |
uriniferous tubule | 1.56e-07 | 15 |
nephrogenic mesenchyme | 1.56e-07 | 15 |
urinary system structure | 9.05e-07 | 47 |