FFCP PHASE1:Hg19::chr16:2802316..2802364,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16639 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UQ35,F5GWZ7 | |||
|association_with_transcript=0bp_to_ENST00000301740,ENST00000382301,ENST00000396975,ENST00000544933,NM_016333,uc002crj.1,uc002crk.2_5end | |||
|description=CAGE_peak_2_at_SRRM2_5end | |||
|id=chr16:2802316..2802364,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.03e-09!57;UBERON:0005068!1.03e-09!57;UBERON:0006241!1.03e-09!57;UBERON:0007135!1.03e-09!57;UBERON:0005743!1.14e-09!86;UBERON:0000073!1.41e-09!94;UBERON:0001016!1.41e-09!94;UBERON:0002780!3.11e-09!41;UBERON:0001890!3.11e-09!41;UBERON:0006240!3.11e-09!41;UBERON:0001017!3.29e-09!82;UBERON:0003080!1.19e-08!42;UBERON:0000955!1.34e-08!69;UBERON:0006238!1.34e-08!69;UBERON:0002346!3.31e-08!90;UBERON:0007023!3.48e-08!115;UBERON:0001893!1.08e-07!34;UBERON:0002616!1.33e-07!59;UBERON:0002791!2.45e-07!33;UBERON:0002020!2.56e-07!34;UBERON:0003528!2.56e-07!34;UBERON:0003075!3.59e-07!86;UBERON:0007284!3.59e-07!86;UBERON:0001869!5.55e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.94e-07;41!UBERON:0001890;8.94e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.45e-10,56;UBERON:0005068,3.45e-10,56;UBERON:0006241,3.45e-10,56;UBERON:0007135,3.45e-10,56;UBERON:0001017,1.35e-09,81;UBERON:0000073,1.54e-09,53;UBERON:0002616,1.54e-09,53;UBERON:0001016,1.77e-09,89;UBERON:0002780,3.52e-09,41;UBERON:0001890,3.52e-09,41;UBERON:0003080,3.52e-09,41;UBERON:0006240,3.52e-09,41;UBERON:0000955,5.24e-09,68;UBERON:0006238,5.24e-09,68;UBERON:0002346,1.47e-08,86;UBERON:0007023,3.88e-08,114;UBERON:0001893,1.22e-07,34;UBERON:0010371,1.65e-07,104;UBERON:0003075,1.72e-07,82;UBERON:0007284,1.72e-07,82;UBERON:0003528,2.89e-07,34;UBERON:0002020,2.89e-07,34;UBERON:0002791,5.56e-07,32;UBERON:0001869,6.26e-07,32 | |||
|phase1_expression=1.63510541343501,3.63970890614671,2.96004248601539,0,1.34088328328186,1.74467704820074,0,2.52687949370732,1.56711376919903,1.96587149201207,4.18680700783456,4.58726881473362,4.22027165165526,1.8564952944007,0.662794751455832,1.34465029290355,0.602694528023977,2.19093027116212,0.975865597581014,3.0780264519197,3.06001036866379,2.19418305034661,0.85870796139317,2.32686522623903,2.88748071068046,3.36218985290986,3.53032534634767,4.5652253161934,3.54027849164014,3.0706351847777,4.18003532953405,0.919421224478927,2.409647350226,1.47901604066715,3.40855682553327,1.56386155736164,1.17440175733939,2.21598163412751,3.40925560699241,4.55722828503289,2.91090116511902,1.6194683300949,2.83333124397605,3.48955773070955,1.88937971844405,1.94067248950253,2.32429036905685,4.93401465626191,1.54853185447552,1.7261543539329,2.81776777182011,0.709446689665756,1.72372840368309,0.645484683583826,1.35426486594342,3.01187743268168,1.91034305040492,1.57306439111559,3.06083892370903,2.24650318953266,1.91801137739712,0.989553900560148,2.19410023383795,0.852449501065388,2.03146467040009,1.13477044938228,1.86846674698672,2.26123798731069,1.0429658368404,1.08594422352558,0.605399502633369,0.736555271975129,0.632924774881769,2.11255286311942,2.97646019951061,1.88692780957538,4.71780250815279,3.60424542819615,7.39337698806569,2.28010194992999,3.9783335439818,3.10529061399878,1.75996244461323,1.63841583378639,0,2.56038133539904,0.400395987036012,2.29900975981793,0,1.90810750907073,3.98449078376614,1.17447437874188,2.6759125968766,2.64342657158052,0,1.05353633910031,2.75393678159366,1.96505381374582,1.85041349099558,1.00311897234407,0.32592226663359,1.4203434172042,0,2.33961959458865,0.589211814949674,0.886135578334485,1.62482318259009,2.0494611156108,2.60118695119756,2.13769275984779,1.65810010671509,2.60822777161547,2.22429844743091,2.67540828089713,2.09071047609954,2.49280553934646,0.766440987203842,1.37450978193052,2.53019692019503,1.59282707162048,0.651083453856419,0.950452044448374,1.6563263098555,3.83959833463255,2.49861453104692,2.13099526839615,1.64225599384209,3.42731463482045,1.33720097891754,2.02754165435919,0,3.35350429851818,0.895037932904712,1.80719576192283,2.50668955317945,1.44846518960824,1.5905718941022,1.45990461090791,1.41802225746102,1.55210578223795,2.63504357079378,5.23916301990851,2.18577172975525,1.85392221392215,2.27183175558278,3.13433527138681,2.6591592103773,3.81584998888547,1.71598473234038,2.60020250930695,2.58391129576717,1.72046919021225,2.42998351125316,2.26123176769604,5.03399323451887,3.30141650328081,1.67195973229448,1.29208379584664,1.06729878806013,2.34304428935269,4.02829317109147,0.760272105718513,2.68468263302986,2.20597848207521,2.43042584364528,1.87529429396568,1.57170560838319,0.900891843866578,0,1.89853131913626,1.09921046358244,0,0,2.18047026071267,0.496971951695318,2.78587125662075,7.28250494472703,8.60509862246441,3.19201543978521,0.560677600142307,1.06748995729705,5.92002116201184,4.35695449559673,0.942974704487816,0.980771418680752,3.63257826347835,2.30470369792,2.57753575017176,2.80944069147288,1.71141546463335,2.39117888882882,0.704606991862589,1.45685649931318,1.54495887372473,1.22492502752936,1.22834317311768,2.37649296704261,3.56400857184616,0.494533858557114,8.19145225744224,3.59309070908119,1.17835279767846,2.00189631795143,3.3247693858102,0.877955241761676,0.30648779579902,1.20190447125277,1.24775401476023,7.17558542755448,0.85422955527427,1.69545520927649,7.20218630602566,1.44273540933814,1.8034837803194,2.04728541964749,9.28269827326964,2.43592512902997,5.80597680761463,1.74894807420369,2.42469085228218,9.23024940543197,2.72030665214629,3.56077243852024,1.93260853163297,2.18196896472668,2.58124135850103,4.63500083292463,6.62648841607426,4.88014560051977,4.04278114559945,2.01856680700503,2.91981887260664,4.69348596989448,2.57296375277154,1.38134921352481,2.78620756819187,4.33127689001751,4.02243120135469,4.55178663210875,4.33819853790268,3.30881918197182,3.26819166138609,4.98268300133303,1.61797569792197,3.92442930250692,3.46272441251751,1.4763109092493,1.40241773803446,4.9388881359768,7.3504355692771,22.8159062679296,4.91413608338813,4.72631925345123,3.5317047953172,1.47586126251736,2.40194934417936,4.06076056011915,1.1240175325762,1.20634766893957,1.20364978706088,1.3032332212413,2.07986957055916,1.44331342025273,1.62302566965108,1.6437217193015,1.73239737313289,0.925971025153221,1.71228737011138,3.95102198979638,2.57545848628462,2.46217006087397,1.63802985597466,1.63494278517601,0,3.02367830757947,2.69372684760534,1.52249488594842,2.3250715081117,3.4504441124869,2.46331618947972,3.25779205848936,2.07328115540772,1.8735593944205,2.77733353538036,2.41291998310242,3.81988425558278,1.17217447210047,3.4214489204541,1.95372236136315,1.8020583470635,2.00078502841405,4.03671903643299,3.48768055066624,1.54010400223995,2.71470603091333,0,1.690605505112,1.59562869950922,1.04007436911366,5.14414748524284,2.83698264046557,1.8649552531127,1.71573592389777,6.51145926469732,0,1.30294473717494,2.13235169245527,0,4.52159065589379,0,3.79897366491817,1.2162378064119,2.00902836572851,2.10833939483032,1.4377491329495,1.14861935834114,2.85273810081437,2.02693829334611,2.05476322550383,1.96967059563885,1.12085143993527,2.75843064282698,1.50939302401662,1.79680250791648,6.60646022978405,6.50699269288109,6.18631050222156,2.01019518401218,2.55175500661265,1.49801404789436,2.99161459204025,1.65766205374414,1.71768088406796,0.500170521059677,1.35632511849868,3.11956292296211,3.21172179834891,4.25796520591624,2.34282829985426,3.00946099727719,4.5481500811197,2.0694614258501,1.32845119707087,1.65932251687533,1.91143951829782,2.15381273209015,1.71571711905428,5.58273670531796,4.09856981555372,3.94891963872744,1.21251028578504,6.65741758041988,3.62868351995616,2.97729369382532,7.67309866440312,1.96462066103151,2.05022638809122,2.55853624533352,1.60853921143608,1.48418066444991,2.46735510084249,1.42049380250502,2.29956036838666,2.59627214591811,2.09178681227927,1.81289174387433,4.21063587636898,1.56537681191024,2.06666006696292,0.728364672026868,2.36023946926963,1.80479845162965,1.30926073077505,6.27479815341484,2.92278449306521,1.58327443339314,3.4120015221269,1.53084334748864,2.15915916102139,6.16909010761157,3.79325012561394,3.01013864312912,3.82314409567557,1.66215201785745,4.70136984916574,3.50815802633495,3.66009631434861,1.79515087581472,4.59220503979588,3.57916234130733,3.50339439602256,3.57120912791539,3.96045599618822,4.01985876597321,5.85054221432869,8.03419649220798,2.51343867559517,1.54048617114644,0.767518373630648,1.24052915236078,2.36324538710202,2.75531718437034,1.87498580315422,2.93805717634233,1.98341898433174,0.960950336825531,4.21121951232128,1.4162089319777,0.929691098594572,8.49993336442728,2.7881490806424,2.15623506123262,3.72614221221915,2.60979897622522,1.11194531462352,0.286249773483982,0.372158369359667,0.632758849437452,2.2875623270859,3.07077349573601,1.28381696410176,4.77304871888905,2.35484592059769,1.07923474549989,1.64722217841633,2.12062324222236,3.23491970517306,3.17020642346017,2.10629228119491,3.41343617362713,1.70599442741899,1.05650146756755,1.9109987597118,1.97967604735198,3.39024349860728,4.41092274836899,1.32687795048244,1.75380354101505,4.6302042741335,1.31178950409327,2.63783490051515,1.8589409885985,2.81695602532241,1.57752487424457,0.88424136911809,3.5667105148125,1.41904425628239,1.68886108238131,0.658589785919804,4.9331512589543,1.04980416073495,0.673554789078584,0.670302275535787,2.17781969722645,3.38917682796405,3.01353760869861,0,2.66058092122005,1.1486170010348,1.52234282769651,3.0585488285695,2.27858874869665,3.81170840732462,0,0.648473311192717,0.540031437238115,2.37937552888281,5.76849984088355,0.962479855263359,3.43056302373444,2.41544127663434,2.30830740762312,1.92082977040718,3.50737800003409,2.99369057149225,2.68107518185313,5.29183956809707,1.62310970137278,2.52717460302113,4.10822422259746,2.50687833236837,5.01268954180134,2.37008488922245,6.90528722945908,5.44859209415828,4.25846237690326,3.43505344755765,4.30137070031841,4.2498460499559,5.17232339306916,1.9538809540204,3.89768643453339,3.69262196843137,6.49093628342359,7.66065526394986,5.63948020351398,3.92995134857262,2.63714722689409,5.82530504397664,2.67464122265948,5.39858678932185,1.90995587790152,1.18785872333055,2.76444631889309,1.9882952955326,3.93874365949436,0.890469640183247,3.79048910721547,3.80025734630388,2.39097585901284,4.97311047956066,7.80991518348256,1.32949287252801,1.96935688737711,1.55519793830904,2.24670877868317,7.16084698702437,2.04628948090749,1.08507746200627,0,1.11136990144637,3.87733098438087,4.08179631912146,1.99613798001194,2.3438498497671,8.74599999961957,1.44999915086959,2.61724931056649,1.27126825146383,2.12748913591143,4.13692047889758,3.2076507472158,3.47249989866585,7.97167247232455,4.70326110639091,3.05163472634166,6.19243855614858,2.06883333267483,1.53569778007781,7.84356937336729,2.23077990845765,2.23155749661011,1.70913083770502,3.91958637459702,2.87224462111271,4.56318962072434,2.55200927785536,1.09917112082235,2.66517388009317,1.02193298195737,2.98262487150547,2.82559859230266,9.70061340653877,8.4306889756628,7.38414982693708,9.48768663620925,4.29128763247022,0.632994193584081,2.44849212238722,1.83758992864123,4.11138415509973,6.96683351754953,3.98059040265026,3.05515072466813,4.15129580152871,2.59484271787656,2.19286093961456,4.58327704268604,0,2.81117334870407,3.83155057352899,3.91329237864179,1.45668227720456,5.12959723704208,2.41981432097328,4.89716418608784,2.33790344625405,2.85614496887536,6.94710882361556,0.664653872707185,1.65495977937749,2.5114633472578,4.77889719091835,1.70765727617876,1.94144542218394,3.12407529003236,2.25382514053069,2.00236175134926,3.66926003308263,4.1276647793188,9.095095141174,10.7441296116693,8.54000753353376,2.81268147816416,5.03059922141551,3.61569185248852,1.91858694505451,1.39100228192093,4.05189094117624,2.93327074102205,1.44285876452761,4.0556069000477,2.19790570540343,0.576361668616424,5.8413664044617,1.88754497648161,7.63490429337193,2.98206085357038,2.12124631155116,5.97978506723902,4.39331954511799,2.3459590056354,2.60055530911367,3.00210144354895,5.61312053457172,8.94226116468806,4.29765441419957,2.10309883423452,2.51354161145029,2.97908551215189,2.87149209830726,1.39775300349294,2.14613024068285,1.78537165953498,2.95607278941596,2.16179930125442,1.16495949527454,5.59360594381288,5.27461493639465,6.47074021000175,3.24810688998671,2.7095466261051,0.795229689809303,3.54128855890097,1.28602518772015,3.98864366131978,2.49264202817511,2.249738915515,1.5476039091159,4.85996453264197,4.02521625119119,2.60058834087354,4.24882163893485,3.59041144165982,2.33073541132698,1.34340638123612,1.42939065274673,0,3.5597595271665,1.62899880526114,1.72844298240254,1.30634944043764,5.98650957812437,2.46277562248017,3.40776043570843,3.17273856256352,2.78449243988357,2.65013777824443,3.10279095267721,4.23144325576608,4.27717094710824,3.52407511158336,1.38823636338003,4.40172054279065,2.07119527673598,1.9846640872478,6.12596058883627,4.50632614009315,0.638341257770182,4.89616023032527,2.2562090462043,3.36980134439808,3.27872630709804,5.4968933687582,4.43034089983493,4.39294553647067,3.6305369904885,1.14681839138014,3.88251680378983,4.16045899707269,12.1746798743883,2.99952979109056,1.21319294033318,1.7127920012698,1.41159491818903,9.83503302194451,5.07223600137888,1.34329322598187,2.33713309847224,1.10961172300523,1.32582103692562,2.26411111577318,0.889811221596536,0.915360273587694,2.26846385644859,1.86524640699337,1.47855149989634,1.75226443880073,2.69881867298163,1.24210365501008,1.24411862352257,2.12673371646396,2.08698024724694,1.35231848097497,1.52322084867518,2.03435366602331,2.36403256963327,2.04080058380728,4.17630383890644,4.77715066438339,1.60011105865261,2.74716564146234,2.35724642136143,0,3.27453711692416,3.00218227924896,2.3489486276869,4.30741258473318,1.85217979459067,3.67105056759701,3.22359913946677,2.16161013012681,3.28926074368061,1.59020231351293,4.43702288023104,2.53413660979609,2.04993214870357,5.87231580943038,1.82315973706429,5.53033744606923,4.28692679446655,2.5244319659539,0.981392365535065,2.6208787907713,1.47463745252232,0.422624246717254,0.999936979274649,1.70706767510625,1.72214979660816,0.567515953566836,2.76158925377761,0.699397538597222,2.48830904013189,4.09261988171685,9.38075859151132,1.25812753484717,4.80522408044861,4.24331324885063,5.73952284274544,3.96594445628807,1.67593475391973,1.27201740261367,2.05040537003259,1.60114149657094,2.1160556621441,0.918736432059601,5.84485948377782,7.08482881627925,6.06608664417175,5.33302547025963,2.52071696221718,4.84100767249525,2.90656162137332,4.28308260777463,3.92590874004102,2.00548529691159,2.93485757634686,1.27078232765372,1.1441462864015,2.0710797781803,6.76315155195334,2.18109952212846,2.42046082444224,1.56302802246618,2.61906694481422,2.78412259767164,2.21784129325568,4.93024367714281,3.90539049306924,5.37385670903079,4.18544347279785,3.28184885410932,2.74128883428591,3.96968942711435,6.33136479694634,3.19406069098988,6.42842203053944,6.05310699993883,2.42786241694653,5.23623040107984,4.7899279887825,2.18944576355981,2.22934412268644,4.89382077433188,4.60409414939944,4.25497827182286,2.33585943973345,3.45369608542262,6.44173918655608,1.96190514319652,4.56579360254748,2.59113109462346,2.38875843943525,5.43221735742588,6.47855808104179,3.71972561178001,4.34645680756449,2.40513409419076,5.38762026823896,5.97514669828825,3.45629830907046,3.44181887056222,2.01164401241961,3.57896299988462,4.65725755210022,1.8328549483524,0.31020638566432,0.955538938977433,2.23710863595585,2.84635677484205,4.75479907430851,2.58971534875158,2.15591894398119,2.3196288626764,4.37139893753226,4.67878926924211,5.17272015419557,4.63788354032517,3.04954421505192,9.45488444010691,5.28369952483357,4.86197196080051,3.71551252856727,2.35158648180761,3.18692818280077,1.17838273550813,3.14093547383912,3.56455680392503,7.1851473689178,1.69927114687817,2.06764619555678,3.73855750246748,6.49617513512038,1.07132363163395,0.705789743431384,2.24675826729671,0,7.33966853447265,5.73358332605805,7.09972029869331,6.05124262699141,3.9271562130634,2.645134202577,2.97596014533401,3.23522940041993,2.59575937274273,4.92049056856808,2.62237372712869,2.66066852124018,4.58949733838918,6.41321772637345,4.13527047906802,3.76061308938563,5.60762366814972,10.450601076091,3.31667775783512,5.89568076412803,4.90438158372256,4.99935306073855,4.32745695901241,6.51784500106508,2.57903283935411,2.60953348940476,5.45716410187192,2.61260097476354,1.71116650542641,2.6940821205835,3.87299909120452,6.32054677437425,1.70946864083046,0.960546112899439,1.9307228228694,3.14388207373054,2.34640942403454,4.52293343476606,4.06896178315738,0.665756774185513,3.8242020782295,1.28227396921293 | |||
|short_description=p2@SRRM2 | |||
}} |
Revision as of 01:55, 12 January 2014
Short description: | p2@SRRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SRRM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000301740, ENST00000382301, ENST00000396975, ENST00000544933, NM_016333, uc002crj.1, uc002crk.2_5end |
EntrezGene: | SRRM2 |
HGNC: | 16639 |
UniProt: | Q9UQ35F5GWZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.45e-10 | 56 |
neural rod | 3.45e-10 | 56 |
future spinal cord | 3.45e-10 | 56 |
neural keel | 3.45e-10 | 56 |
central nervous system | 1.35e-09 | 81 |
regional part of nervous system | 1.54e-09 | 53 |
regional part of brain | 1.54e-09 | 53 |
nervous system | 1.77e-09 | 89 |
regional part of forebrain | 3.52e-09 | 41 |
forebrain | 3.52e-09 | 41 |
anterior neural tube | 3.52e-09 | 41 |
future forebrain | 3.52e-09 | 41 |
brain | 5.24e-09 | 68 |
future brain | 5.24e-09 | 68 |
neurectoderm | 1.47e-08 | 86 |
adult organism | 3.88e-08 | 114 |
telencephalon | 1.22e-07 | 34 |
ecto-epithelium | 1.65e-07 | 104 |
neural plate | 1.72e-07 | 82 |
presumptive neural plate | 1.72e-07 | 82 |
brain grey matter | 2.89e-07 | 34 |
gray matter | 2.89e-07 | 34 |
regional part of telencephalon | 5.56e-07 | 32 |
cerebral hemisphere | 6.26e-07 | 32 |