FFCP PHASE1:Hg19::chr15:89346739..89346750,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=319 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=34bp_to_ENST00000558207_5end | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_3_at_ACAN_5end | |||
|id=chr15:89346739..89346750,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.78e-09!180;CL:0000153!4.65e-08!9;CL:0000447!4.65e-08!9;CL:0000057!4.20e-07!75;CL:0002620!5.18e-07!23;CL:0000667!9.26e-07!6;CL:0000058!9.26e-07!6;CL:0000138!9.26e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.54e-15;9!CL:0000447;2.54e-15;9!CL:0000138;2.38e-12;6!CL:0002620;8.27e-10;23!CL:0000062;1.08e-09;9!CL:0000327;1.15e-08;15!CL:0000135;2.89e-08;3!CL:0000388;2.89e-08;3!CL:0000499;5.29e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.55e-15,9;CL:0000447,2.55e-15,9;CL:0000058,2.38e-12,6;CL:0000138,2.38e-12,6;CL:0000062,3.43e-10,11;CL:0000375,3.43e-10,11;CL:0000335,3.43e-10,11;CL:0000057,6.84e-10,76;CL:0002620,7.45e-10,23;CL:0000327,1.15e-08,15;CL:0000135,2.13e-08,3;CL:0000388,2.13e-08,3;CL:0000499,4.80e-08,28 | |||
|ontology_enrichment_development_v019=CL:0000335;2.57e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.78e-14!115;UBERON:0001049!2.47e-10!57;UBERON:0005068!2.47e-10!57;UBERON:0006241!2.47e-10!57;UBERON:0007135!2.47e-10!57;UBERON:0001017!3.83e-10!82;UBERON:0005743!8.35e-10!86;UBERON:0002020!1.67e-09!34;UBERON:0003528!1.67e-09!34;UBERON:0001893!2.16e-09!34;UBERON:0000073!2.32e-09!94;UBERON:0001016!2.32e-09!94;UBERON:0002791!8.33e-09!33;UBERON:0002780!1.40e-08!41;UBERON:0001890!1.40e-08!41;UBERON:0006240!1.40e-08!41;UBERON:0001869!2.24e-08!32;UBERON:0003080!3.10e-08!42;UBERON:0003075!1.80e-07!86;UBERON:0007284!1.80e-07!86;UBERON:0002616!2.96e-07!59;UBERON:0002346!9.42e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.89e-08;3!UBERON:0000043;2.89e-08;3!UBERON:0007845;2.89e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.13e-08,3;UBERON:0000043,2.13e-08,3;UBERON:0007845,2.13e-08,3;UBERON:0002199,8.85e-07,46;UBERON:0002416,8.85e-07,46 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.140954404095971,4.00293193412522,0,0,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.0955765909171,83.2220931655577,36.0667832212451,58.8511600817813,153.28998414533,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.2971207635863,0.12663051166458,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.15980866619238,0,0,0,0,0,5.26773145057006,13.4854630151569,14.2726155961267,0.226864366320042,18.1183532045751,2.77624605464138,0,0.900273288253207,0.206105058476878,48.9517026086695,22.5201396161224,13.6708829115426,20.0720230632069,0,0.0920498986422993,1.45481451136931,25.9157002537128,5.44061330429257,9.15627198476633,0,0,0,0.609868530647977,0.662648841607426,0.69716365721711,0.725627385107593,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,3.11512312139057,34.4585807502342,7.13184525203592,0,3.28762116080613,0.716243852959582,0,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0.36807447515742,1.00034104211935,0,0.207970861530807,0.178428988797162,0,0,2.10662269809403,2.27407504055985,2.0694614258501,13.2845119707087,2.76553752812555,0,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,27.1627692719871,2.80660094433074,0.256278298511402,5.11707249066703,0.965123526861645,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.413509717453592,0,0,0.596586391912706,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,1.50149902548784,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,43.0659576007235,29.3072454734313,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,8.76691148304707,0,0,0,0,2.48831670129446,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0,0,0.461701551022782,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,2.65383634439649,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,6.10148000107438,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,1.67569440763353,0,0,0.199679000498991,0,0,1.34366944973453,0,0,0,0,0,0,0,0,0.681017030557878,0.321506296930038,0.137539436597234,0,0,0,0.242998226632099,0,0.551639951094387,1.41627387964495,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.517131825446202,0.52893040697076,0,0,0.106787412567695,1.41483874589699,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,1.76097531226803,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80019435264208,5.15093557774189,3.70424437642511,37.8554694685953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45206090914786,0,0,0.705351887381368,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0,0.691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,1.1441462864015,0,4.37615688655804,0.0752103283492573,0.60511520611056,0,0,0,0,0.405225507710368,0,0,0.507326481551255,0,0,1.98484471355718,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0.271878931907327,0.394636641377094,0,0,0.235479278551542,0.314231179832004,0,0.913158720509496,0,0,0.142953088353313,0,0,0,2.40513409419076,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,4.6392577253528,1.45713297917742,0,0,0.951360726220549,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,5.4945244585842,45.0306853922715,0,0.644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,0,0,1.85997509083376,28.6548889751479,2.59575937274273,0.126166424835079,0,0.126698501011437,1.1218771271618,0,0,1.50424523575425,0.757786982182394,1.33982065078089,0,0.310298987585686,1.27940389140589,4.52322419781107,0,0,0,0.0636471582781649,0,0,0,0,1.43444410785353,12.9737539052945,0,0,0,0,2.34640942403454,0.488965776731466,2.03448089157869,0,0,0 | |||
|short_description=p3@ACAN | |||
}} |
Revision as of 01:05, 12 January 2014
Short description: | p3@ACAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACAN_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 34bp_to_ENST00000558207_5end |
EntrezGene: | ACAN |
HGNC: | 319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.55e-15 | 9 |
carbohydrate secreting cell | 2.55e-15 | 9 |
chondroblast | 2.38e-12 | 6 |
chondrocyte | 2.38e-12 | 6 |
osteoblast | 3.43e-10 | 11 |
osteoprogenitor cell | 3.43e-10 | 11 |
mesenchyme condensation cell | 3.43e-10 | 11 |
fibroblast | 6.84e-10 | 76 |
skin fibroblast | 7.45e-10 | 23 |
extracellular matrix secreting cell | 1.15e-08 | 15 |
fibrocyte | 2.13e-08 | 3 |
tendon cell | 2.13e-08 | 3 |
stromal cell | 4.80e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.13e-08 | 3 |
tendon | 2.13e-08 | 3 |
regular connective tissue | 2.13e-08 | 3 |
integument | 8.85e-07 | 46 |
integumental system | 8.85e-07 | 46 |