FFCP PHASE1:Hg19::chr15:52840174..52840204,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=242bp_to_BC004939_5end | |||
|description=CAGE_peak_4_at_BC004939_5end | |||
|id=chr15:52840174..52840204,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.86e-09;3!CL:0000511;1.43e-07;1!CL:0002625;1.43e-07;1!CL:0000216;1.43e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.84e-09,3;CL:0000511,9.44e-08,1;CL:0002625,9.44e-08,1;CL:0000216,9.44e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.72e-09!143;DOID:162!6.87e-09!235;DOID:14566!1.04e-08!239;DOID:305!6.76e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.43e-07;1!DOID:0070004;1.43e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.80e-07,1;DOID:0070004,1.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003080!3.98e-11!42;UBERON:0001049!6.09e-11!57;UBERON:0005068!6.09e-11!57;UBERON:0006241!6.09e-11!57;UBERON:0007135!6.09e-11!57;UBERON:0002780!1.19e-10!41;UBERON:0001890!1.19e-10!41;UBERON:0006240!1.19e-10!41;UBERON:0002020!1.24e-10!34;UBERON:0003528!1.24e-10!34;UBERON:0002791!4.74e-10!33;UBERON:0001893!5.74e-10!34;UBERON:0001869!1.48e-09!32;UBERON:0000955!3.34e-09!69;UBERON:0006238!3.34e-09!69;UBERON:0002616!3.93e-09!59;UBERON:0003056!4.19e-09!61;UBERON:0003075!5.38e-09!86;UBERON:0007284!5.38e-09!86;UBERON:0002346!6.98e-09!90;UBERON:0001017!7.01e-09!82;UBERON:0000073!1.45e-08!94;UBERON:0001016!1.45e-08!94;UBERON:0005743!1.73e-08!86;UBERON:0000956!2.44e-08!25;UBERON:0000203!2.44e-08!25;UBERON:0002619!4.19e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.47e-18;34!UBERON:0002020;1.47e-18;34!UBERON:0000956;2.28e-18;25!UBERON:0000203;2.28e-18;25!UBERON:0001869;2.32e-17;32!UBERON:0002791;1.49e-16;32!UBERON:0001893;1.34e-15;34!UBERON:0002619;7.93e-13;22!UBERON:0002780;4.22e-12;41!UBERON:0001890;4.22e-12;41!UBERON:0001950;1.53e-10;20!UBERON:0000073;2.18e-09;53!UBERON:0002616;2.18e-09;53!UBERON:0001871;8.73e-09;6!UBERON:0000955;1.97e-08;68!UBERON:0000029;1.43e-07;1!UBERON:0002146;1.43e-07;1!UBERON:0001136;1.43e-07;1!UBERON:0001343;1.43e-07;1!UBERON:0005623;1.43e-07;1!UBERON:0004910;1.43e-07;1!UBERON:0004813;1.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,7.42e-20,34;UBERON:0002020,7.42e-20,34;UBERON:0000956,2.72e-18,25;UBERON:0000203,2.72e-18,25;UBERON:0002791,1.56e-17,32;UBERON:0001869,1.56e-17,32;UBERON:0000073,2.50e-17,53;UBERON:0002616,2.50e-17,53;UBERON:0001893,1.97e-16,34;UBERON:0002780,2.29e-16,41;UBERON:0001890,2.29e-16,41;UBERON:0003080,2.29e-16,41;UBERON:0006240,2.29e-16,41;UBERON:0001049,2.78e-16,56;UBERON:0005068,2.78e-16,56;UBERON:0006241,2.78e-16,56;UBERON:0007135,2.78e-16,56;UBERON:0003075,4.28e-14,82;UBERON:0007284,4.28e-14,82;UBERON:0002346,2.62e-13,86;UBERON:0002619,8.13e-13,22;UBERON:0000955,8.75e-13,68;UBERON:0006238,8.75e-13,68;UBERON:0003056,1.67e-12,61;UBERON:0001017,3.21e-12,81;UBERON:0001016,9.40e-11,89;UBERON:0001950,1.33e-10,20;UBERON:0010371,1.64e-10,104;UBERON:0001871,6.71e-09,6;UBERON:0010314,6.74e-09,132;UBERON:0001136,9.44e-08,1;UBERON:0001343,9.44e-08,1;UBERON:0004910,9.44e-08,1;UBERON:0005154,9.44e-08,1;UBERON:0005295,9.44e-08,1;UBERON:0004813,9.44e-08,1;UBERON:0005297,9.44e-08,1;UBERON:0005294,9.44e-08,1;UBERON:0010141,9.44e-08,1;UBERON:0005891,9.44e-08,1;UBERON:0000029,1.07e-07,1;UBERON:0002146,2.31e-07,1;UBERON:0005623,2.31e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0.286235987131057,1.50561867580173,1.00434111675842,0,0.410502947249729,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0.434021741431704,0.223915474239924,0,0,0.290796477559129,0.755751887377619,0.485168122375632,0.232429036905685,0.411167888021826,0,0,0,0,0,0,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0.659702600373432,0,0,0.580418477257168,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0.167186495390678,0.32592226663359,0,0,0,0.589211814949674,0.221533894583621,0.270803863765016,0.512365278902701,0.520237390239513,0.657751618414705,0.276350017785848,0,0.444859689486181,0,0,0,0,0,0.506039384039006,0,0,0,0,0,1.24930726552346,0,0,0,0,0.434473211648397,0,0.670700859703636,0,0.722878304769133,0,0.579386075843295,0,0,0.472674085820339,0.221729397462564,0.527008714158756,0.0654895377488563,0,0,0,0.696518949197069,0.132957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.357198913136319,0,0.675668882899933,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,0.737005903870608,0,0,0,0,0,0.336672227908132,0.500474079487857,0,0,0,0.45071417671979,0.113432183160021,0,0.427114777637135,0.423863802319124,0,0.206105058476878,0,0.558350568994769,0.168776332241266,0.389748020644795,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.365921118388786,0.397589304964456,0.464775771478074,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.220587945464788,0,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.514703430895577,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0.34779121492523,0.352226082707465,0.144366447761074,0,0.190254152234598,0,0,0,0,0.445893486866185,0,0.335964256397719,0,0.358234090811393,0,0.383382679165211,0.492663237895943,0.792435906119034,0.207328115540772,0,0,0.126995788584338,0,0,0,0.925447434329912,0.600686115687835,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0.57191197463259,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0.410952645100767,0,0.336255431980582,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,0.335032530668698,1.91381625495949,0,2.99161459204025,0,0.36807447515742,0,0.271265023699736,0.831883446123229,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0.532685175939381,0.410635780069046,0,0.581051892299796,0.120859449591622,0.200506470303285,1.19705285616665,0.459257792658427,0.910455840033585,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0,0.460511024178389,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0,0.330569830721956,0,0.127612712494584,0.4046311234222,0.464845549297286,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0.987884678879706,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.320472213382419,0,0,0.743212700502875,0.144269212976445,0,0.478278818186467,0.399158742865633,0.191505370132367,0,0.324621940274555,0.280797178113459,0.456469358066384,0.626719583092093,0,0.338583555603207,0.321176150207399,0.403599414382095,0,0,0.614481528616916,0,0.834245708559542,0,0.278406173895242,0,0.270455678475983,0,0,0,0.439524537815682,0.121360521749513,0.111443384277478,0.284136146806413,0.47748896947538,0,0.614321404198464,1.9882952955326,0.703347082052564,0.111308705022906,0,0.422250816255987,0.19924798825107,0,0.503865495708552,0.20453736500431,0.369254416383208,0.622079175323615,0.269605053441981,1.07412704805365,0.511572370226872,0.0986434056369336,0,0,0,0.834912883456661,0,1.82299432759663,0.524759999977174,0.724999575434793,0.910347586283997,0.762760950878299,0.472775363535873,0.689486746482929,0.583209226766509,0.347249989866585,0.885741385813839,0.361789315876224,0,0.331737779793674,1.77328571372128,0.438770794307945,0.10893846351899,0.13942374427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| |||
|short_description=p4@BC004939 | |||
}} |
Revision as of 23:38, 11 January 2014
Short description: | p4@BC004939 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_BC004939_5end |
Coexpression cluster: | NA |
Association with transcript: | 242bp_to_BC004939_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.84e-09 | 3 |
androgen binding protein secreting cell | 9.44e-08 | 1 |
seminiferous tubule epithelial cell | 9.44e-08 | 1 |
Sertoli cell | 9.44e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.80e-07 | 1 |
myeloma | 1.80e-07 | 1 |