FFCP PHASE1:Hg19::chr15:43478059..43478094,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3488 | |||
|description=CAGE_peak_at_chr15:43478059..43478094,- | |||
|id=chr15:43478059..43478094,- | |||
|ontology_enrichment_celltype=CL:0000838!2.18e-14!52;CL:0000542!4.78e-14!53;CL:0000051!4.78e-14!53;CL:0000791!1.38e-11!18;CL:0000789!1.38e-11!18;CL:0002420!1.38e-11!18;CL:0002419!1.38e-11!18;CL:0000790!1.38e-11!18;CL:0000084!4.76e-11!25;CL:0000827!4.76e-11!25;CL:0000037!1.17e-10!172;CL:0000566!1.17e-10!172;CL:0000738!2.63e-10!140;CL:0000988!1.35e-09!182;CL:0002032!1.84e-08!165;CL:0000837!1.84e-08!165;CL:0000625!6.45e-08!11;CL:0002087!9.63e-08!119;CL:0002031!3.23e-07!124;CL:0000236!4.61e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.06e-19;18!CL:0000789;4.06e-19;18!CL:0002419;4.06e-19;18!CL:0000084;1.64e-16;25!CL:0000625;9.85e-13;11!CL:0000542;4.51e-11;53!CL:0000624;1.55e-07;6!CL:0000236;7.76e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.08e-19,18;CL:0000789,3.08e-19,18;CL:0002420,3.08e-19,18;CL:0002419,3.08e-19,18;CL:0000790,3.08e-19,18;CL:0000838,6.40e-18,52;CL:0000542,2.35e-17,53;CL:0000051,2.35e-17,53;CL:0000084,1.74e-16,25;CL:0000827,1.74e-16,25;CL:0000625,9.01e-13,11;CL:0000738,3.79e-09,136;CL:0000624,1.15e-07,6;CL:0000037,1.19e-07,168;CL:0000988,6.91e-07,177;CL:0002087,8.02e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;4.06e-19;18!CL:0000051;4.51e-11;53!UBERON:0006601;2.13e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.83e-23!115;UBERON:0001049!8.21e-18!57;UBERON:0005068!8.21e-18!57;UBERON:0006241!8.21e-18!57;UBERON:0007135!8.21e-18!57;UBERON:0000073!8.66e-18!94;UBERON:0001016!8.66e-18!94;UBERON:0001017!1.75e-16!82;UBERON:0000955!3.18e-16!69;UBERON:0006238!3.18e-16!69;UBERON:0005743!1.61e-15!86;UBERON:0002616!2.16e-15!59;UBERON:0002780!5.46e-15!41;UBERON:0001890!5.46e-15!41;UBERON:0006240!5.46e-15!41;UBERON:0003080!4.15e-14!42;UBERON:0001893!2.19e-12!34;UBERON:0002020!2.31e-12!34;UBERON:0003528!2.31e-12!34;UBERON:0002791!5.75e-12!33;UBERON:0001869!1.93e-11!32;UBERON:0002346!1.49e-10!90;UBERON:0003075!9.96e-10!86;UBERON:0007284!9.96e-10!86;UBERON:0001950!1.15e-09!20;UBERON:0002619!2.90e-09!22;UBERON:0000956!3.85e-08!25;UBERON:0000203!3.85e-08!25;UBERON:0003056!1.91e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.06e-16;41!UBERON:0001890;1.06e-16;41!UBERON:0003528;1.77e-16;34!UBERON:0002020;1.77e-16;34!UBERON:0001893;3.80e-16;34!UBERON:0002791;6.24e-16;32!UBERON:0001869;1.38e-15;32!UBERON:0000073;2.38e-15;53!UBERON:0002616;2.38e-15;53!UBERON:0002619;2.09e-14;22!UBERON:0001950;2.61e-14;20!UBERON:0000956;5.24e-12;25!UBERON:0000203;5.24e-12;25!UBERON:0001016;3.18e-11;83!UBERON:0001017;5.36e-11;75!UBERON:0000955;6.41e-11;68!UBERON:0000125;2.69e-09;9!UBERON:0002308;2.69e-09;9!UBERON:0000178;4.28e-09;15!UBERON:0000179;4.28e-09;15!UBERON:0000463;4.28e-09;15!UBERON:0007023;3.08e-08;114!UBERON:0009663;1.21e-07;7!UBERON:0002420;1.82e-07;9!UBERON:0007245;1.82e-07;9!UBERON:0010009;1.82e-07;9!UBERON:0010011;1.82e-07;9!UBERON:0000454;1.82e-07;9!UBERON:0002390;3.04e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.27e-28,56;UBERON:0005068,1.27e-28,56;UBERON:0006241,1.27e-28,56;UBERON:0007135,1.27e-28,56;UBERON:0000073,3.28e-26,53;UBERON:0002616,3.28e-26,53;UBERON:0007023,4.79e-26,114;UBERON:0001016,5.59e-26,89;UBERON:0001017,9.34e-24,81;UBERON:0002780,8.25e-23,41;UBERON:0001890,8.25e-23,41;UBERON:0003080,8.25e-23,41;UBERON:0006240,8.25e-23,41;UBERON:0000955,2.78e-22,68;UBERON:0006238,2.78e-22,68;UBERON:0001893,3.44e-19,34;UBERON:0003528,3.76e-19,34;UBERON:0002020,3.76e-19,34;UBERON:0003075,1.02e-17,82;UBERON:0007284,1.02e-17,82;UBERON:0002791,1.43e-17,32;UBERON:0001869,1.52e-17,32;UBERON:0002346,2.86e-17,86;UBERON:0003056,1.11e-14,61;UBERON:0002619,3.13e-14,22;UBERON:0001950,3.77e-14,20;UBERON:0000956,7.36e-12,25;UBERON:0000203,7.36e-12,25;UBERON:0010371,6.08e-11,104;UBERON:0000125,2.29e-09,9;UBERON:0002308,2.29e-09,9;UBERON:0000178,5.78e-09,15;UBERON:0000179,5.78e-09,15;UBERON:0000463,5.78e-09,15;UBERON:0011216,2.47e-08,223;UBERON:0004121,2.63e-08,171;UBERON:0000924,2.63e-08,171;UBERON:0006601,2.63e-08,171;UBERON:0010314,7.89e-08,132;UBERON:0009663,9.54e-08,7;UBERON:0002420,1.56e-07,9;UBERON:0007245,1.56e-07,9;UBERON:0010009,1.56e-07,9;UBERON:0010011,1.56e-07,9;UBERON:0000454,1.56e-07,9;UBERON:0003076,4.52e-07,15;UBERON:0003057,4.52e-07,15 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0.783556884599516,0,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0.502170558379211,0,0,0.0787107813136792,2.36018566109342,1.91914699048606,0.464448369948228,0,0,0,0.154934401160603,0.568676929949686,2.64240395401362,0,0.802177789880567,0.868043482863407,0.447830948479849,1.29557466407592,1.28787783817093,1.45398238779565,0.377875943688809,1.21292030593908,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0.752969358170419,0,0.898893937780338,0.612167784741805,0,0,0.989553900560148,0,0.852449501065388,0.290209238628584,0,0,0,1.0429658368404,0,1.81619850790011,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0.419317291016752,0.44931452458598,0.600707571366025,0,0.570025487482497,0.59675003159727,0.365328307529268,5.27988733383968,7.09980194640771,7.11607403090844,0.853460445133014,0.800791974072025,5.74752439954483,4.62731410949403,2.86216126360609,7.96898156753228,2.34894875748376,5.3518251937532,5.28685314316103,6.1655941927969,2.37045676297569,10.4256178160332,4.71612915298998,1.85041349099558,1.67186495390678,7.82213439920617,7.57516489175573,9.74133642039557,1.55974639639243,4.12448270464772,3.1014745241707,4.60366568400527,1.66518715643378,1.95089021339817,2.63100647365882,3.03985019564433,2.89803085735052,9.04548035288569,14.1796638887548,13.589618094647,1.69964014046349,4.21542542962113,4.46715679127419,7.08455137654608,7.00843911513013,6.51083453856419,3.8018081777935,2.40920190524436,3.96758494578697,3.74792179657038,6.15620855314444,5.74789597844733,3.02410114837099,4.54648332831962,6.22744936696036,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.283604451492204,0,0.87834785693126,2.16115474571226,0,0,0.324547393654683,0.174129737299267,0.398873881556595,1.66943437013739,3.43196946468077,3.34311751196608,0,0,0,0,0,0,0.208994966536811,1.55050055501597,1.06729878806013,0.66944122552934,0,0,0,0,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0,0,7.75560528296651,0,0.496971951695318,0.25326102332916,1.05927344650575,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.163461903113459,0.302714855289863,0.576175924479999,0.234321431833797,0.624320153660641,0,0.747243402759005,0.23486899728753,0.647491777472526,0.140450806702248,0,0.368502951935304,0.516628905878827,0,0,0,0,0.505008341862199,0.250237039743928,0,0.438977620880838,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0.257640540045629,0,0.168776332241266,0,0.757301322732344,0.276149695926898,0,0.355009592516614,0.201504196455281,0,0.193260853163297,0,0,0.731842236777572,0.265059536642971,0.232387885739037,0.725627385107593,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,1.47008711385542,0,0,1.18157981336281,4.41463099414651,0,0,0.219500570817251,0,0,0,0.651616610620649,0,0,0,0.352226082707465,0.144366447761074,0,0.570762456703795,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0.985326475791887,1.23267807618516,1.03664057770386,1.00883967391873,0.25248486685276,0.317489471460845,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0.857479297891735,0.336393253036082,0,0,0.129271715757778,0,0.845302752556,1.06375246633948,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.179060963239896,1.2329365839288,4.72873824484625,4.09692392233083,4.10697716095195,1.01637849688985,0,3.86644406388848,2.84777651068393,0.637938751653163,0.749007023947182,2.99161459204025,1.24324654030811,0.12269149171914,0,0,0.623912584592421,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0.343143423810856,7.03011288817817,4.09856981555372,5.22965033236877,0,0,0,0.496215615637554,1.07423381301644,0.280660094433074,0.512556597022804,0,0.482561763430822,0,0,0,0.410635780069046,0,0.232420756919918,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,0.15403067420883,0.784349769176855,0,0,0,0,0.431831832204279,1.54227252690289,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0.328014645699706,0,0.412164046590889,0.366277859273374,0.495056999523528,0.574265537996172,0.650060246036521,0,0.193341436584244,0,0,0.689182862422653,1.50388342815583,0.290033387828457,0.426133137080504,0,0,0.192190067365106,1.27612712494584,0.2023155617111,0,0.94443704049192,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0.551365343546124,0,0,1.15755106853338,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,1.41904425628239,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,0,0.659006605437454,0.43050537267123,0,0,0.229723400206959,4.56702848308952,2.29391162142713,2.27858874869665,3.09701308095126,1.64544909234478,4.53931317834902,3.7802200606668,5.55187623405989,0.213648142254946,0,0,0.185803175125719,0.432807638929335,2.84567373393656,0.318852545457645,0.59873811429845,0.957526850661834,0.423347165447766,0,1.12318871245384,1.59764275323235,0.626719583092093,0,0.169291777801603,0.1605880751037,0.605399121573143,0.425846237690326,0.687010689511529,0.614481528616916,0.447352215784832,0.166849141711909,0,0.278406173895242,1.23087398947712,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,1.11443384277478,0,0.47748896947538,0,0,0.994147647766298,4.22008249231538,0.111308705022906,0.16480387422676,0.211125408127993,1.19548792950642,3.31540698637377,2.26739473068848,0.409074730008619,0.861593638227486,0.622079175323615,0,0,0,0.591860433821602,0,0,1.93866549219044,2.22643435588443,1.99613798001194,0.260427761085233,0,0,0,0.762760950878299,0.236387681767936,0.344743373241465,0,0.347249989866585,2.65722415744152,5.66803261539417,1.52581736317083,5.19722521676756,4.13766666534966,1.31631238292384,0.10893846351899,0,1.84680620409113,0.341826167541004,0.46112780877612,0.179515288819544,0.217294743844016,0,0.0915975934018623,0,2.04386596391473,0.784901281975124,0,0.902382642468723,0.784250137270958,1.34257269580674,0.37950746544837,1.43042921082341,0.421996129056054,0,0,0.216388639742091,1.99052386215701,0.973033209536731,1.83309043480088,1.18608451472249,0.741383633679017,0.522109747527277,3.97666684585995,0.802577647298789,2.34264445725339,0.547364367646998,0,0.242780379534093,0.789168805698781,1.20990716048664,5.50930970934882,0.126373159256976,0.300646838828985,0.311064574191741,0,0,0.313932918407225,0,0,0,0,0,0,1.22308667769421,1.20390222730132,0.290268993867255,0.511625219603299,0.328461828212837,0.193978032976839,0,1.12990370390266,0.137041924646751,0,2.91229661397042,0,0,1.28071796843612,0,0,0.114536596165916,0.686379991447858,0,0.248505071130865,0,0.135904206073614,0.627617077873999,0.305994652908965,0.288950589901519,2.40168115483916,2.73810757783986,5.10986352267889,0,0.262887354279314,0.558564802544508,0.916641696046735,0.717873024576814,0.798716001995964,0.429226048136571,0.223171457441873,1.41085292222125,0.360299883542404,0,0.236349546921671,0.0824158583811665,0.13480708770837,0.0984274815147488,0.254019996197353,0,5.17572943223987,0,0.137539436597234,0,0.2249738915515,0,3.64497339948148,0.670869375198532,0.394028536495991,0.209818352539992,0.105600336519406,1.43429871466276,0.191915197319445,0,0,0,1.08599920350743,0,0,0,0.410462603746695,0,0.113312091520126,0,0,3.23207390903876,2.38018683136842,0.171086837884329,0,0.640724475406168,0.628817220398664,0.828478110694391,0,0.395223263795889,1.09613338542806,0,0,0,0,0,0.314108192500469,2.65820453990096,2.3184990331373,4.00610978260799,0.573409195690071,3.21694249456872,2.98062734118641,1.52183498429854,0.124980407962107,0,0.570930667089935,0.235265819698172,0.468334905806882,0.434763085832475,0,0,0.554805861502613,0.757612021100357,0.50313580350515,0.889811221596536,0.228840068396924,0.151230923763239,0.777186002913902,0,0,0.899606224327209,0,0,0.265841714557995,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0.796191777397232,0,0,0.336749488765919,0,0,0.428883182749851,0.260994291965212,0,0.231522474323834,0,0,0.308801447160972,0.438568099157414,0,0,0.337884881306145,0.76872455576384,0.345430341731199,0,4.28601152070365,0,0.664324201566815,0.654261577023377,0,0.245772908753719,0.211312123358627,0.39997479170986,0.320075189082423,0.172214979660816,0,0.368211900503681,0,0,2.04630994085843,1.29389773676018,1.57265941855896,1.96577348745625,0.509197589862076,4.25149840203366,0.743614585554013,1.11728983594649,0.318004350653419,1.49837315502381,0,0,0,3.91798273088403,4.25089728976755,6.5449882213432,0.615349092722265,6.30179240554295,2.14387482639075,4.84426936895553,5.71077681036618,0.196295437002051,0,0,0.231051332300676,0,0,0.596748666348824,0.526472298444801,0.20170506870352,0.781514011233092,0.261906694481422,0.327543835020193,0,2.36381546164381,0,4.34042272652487,2.40980078736846,4.92277328116398,0,0,0.879356221798103,0,1.07140367175657,4.70797211106354,0.606965604236632,2.73194629621557,0.354809480650555,0.921871900446234,0,2.65081958609644,2.36781984826257,0.354581522651905,0.222462803784138,0.235479278551542,4.24212092773205,0,0.913158720509496,0.215927591218621,0,1.35805433935647,1.42212250559454,0.116241425368125,0.173858272302579,0,0,0.17071847709395,0,0,0.709992004383392,0.426067023795788,0.846774100381858,0.4582137370881,0,0,0.111855431797792,0.294450700845729,0.365753774946808,1.29485767437579,0.307988420568741,0,0,0,1.98950775161368,0.594600453887843,0.33883824611688,0.659643100472575,1.05673990496671,1.08043821351123,0.218559560503957,0,0.490296643507811,0.471353094203252,2.55201007249429,3.26751040359795,2.5359343655004,0.339854229375634,3.10146929333517,1.35361564744512,0.89947040332436,0,0,0,0.730336388246517,0.917458566809082,2.43677291357467,0.157771562193185,2.3117106664911,5.67255897442491,1.5870805215462,0,0.924351257262837,0,0.378499274505237,0.327796715891087,0.506794004045748,0.305966489225945,0.26721740526556,0.275684698604535,0,1.21245917149183,4.82335434281121,1.65833887891756,3.93045384275202,0.213233981900981,1.66645102024618,21.120573516374,33.2720468625798,0.33639558774184,0.190941474834495,0.808468755832877,1.08858373948481,1.36893320434112,2.6940821205835,0.215166616178029,0.665320713092027,0.0814032686109745,0.106727345877715,1.9307228228694,0.0898252021065869,0,1.1001729976458,0,0.665756774185513,3.42165449104745,0 | |||
|short_description=p@chr15:43478059..43478094,- | |||
}} |
Revision as of 23:11, 11 January 2014
Short description: | p@chr15:43478059..43478094, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:43478059..43478094, - |
Coexpression cluster: | C3488_thymus_CD4_giant_Peripheral_CD8_CD19_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.08e-19 | 18 |
alpha-beta T cell | 3.08e-19 | 18 |
immature T cell | 3.08e-19 | 18 |
mature T cell | 3.08e-19 | 18 |
immature alpha-beta T cell | 3.08e-19 | 18 |
lymphoid lineage restricted progenitor cell | 6.40e-18 | 52 |
lymphocyte | 2.35e-17 | 53 |
common lymphoid progenitor | 2.35e-17 | 53 |
T cell | 1.74e-16 | 25 |
pro-T cell | 1.74e-16 | 25 |
CD8-positive, alpha-beta T cell | 9.01e-13 | 11 |
leukocyte | 3.79e-09 | 136 |
CD4-positive, alpha-beta T cell | 1.15e-07 | 6 |
hematopoietic stem cell | 1.19e-07 | 168 |
hematopoietic cell | 6.91e-07 | 177 |
nongranular leukocyte | 8.02e-07 | 115 |