FFCP PHASE1:Hg19::chr15:42566384..42566475,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2595 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4139 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TET4,E7EWB6 | |||
|association_with_transcript=0bp_to_ENST00000318010,ENST00000440615_5end | |||
|coexpression_cluster_id=C813 | |||
|description=CAGE_peak_2_at_GANC_5end | |||
|id=chr15:42566384..42566475,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.36e-39!140;CL:0002087!1.97e-36!119;CL:0002031!1.10e-35!124;CL:0000037!2.93e-32!172;CL:0000566!2.93e-32!172;CL:0002032!4.16e-30!165;CL:0000837!4.16e-30!165;CL:0000988!1.79e-28!182;CL:0000557!1.21e-24!71;CL:0002009!3.17e-22!65;CL:0002194!4.04e-21!63;CL:0000576!4.04e-21!63;CL:0000040!4.04e-21!63;CL:0000559!4.04e-21!63;CL:0000839!5.37e-21!70;CL:0000766!5.34e-20!76;CL:0000763!3.25e-16!112;CL:0000049!3.25e-16!112;CL:0002057!4.15e-15!42;CL:0000860!6.87e-15!45;CL:0000542!1.47e-13!53;CL:0000051!1.47e-13!53;CL:0000838!3.79e-13!52;CL:0000945!1.10e-11!24;CL:0000826!1.10e-11!24;CL:0000236!4.49e-10!14;CL:0000451!3.42e-08!10;CL:0000134!7.59e-08!358;CL:0000990!4.83e-07!8;CL:0002320!6.70e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.51e-12;48!CL:0000945;4.70e-12;24!CL:0002087;3.56e-11;104!CL:0000473;1.90e-10;39!CL:0000234;1.90e-10;39!CL:0000236;2.88e-10;13!CL:0000766;3.73e-10;69!CL:0000860;6.86e-10;33!CL:0002057;6.86e-10;33!CL:0000738;1.38e-09;136!CL:0000542;1.16e-08;53!CL:0000451;1.68e-08;10!CL:0000990;2.70e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.03e-41,136;CL:0002087,1.77e-38,115;CL:0002031,9.85e-38,120;CL:0000037,1.97e-34,168;CL:0002032,4.94e-32,161;CL:0000837,4.94e-32,161;CL:0000988,3.32e-31,177;CL:0000557,2.51e-26,67;CL:0002009,7.76e-24,61;CL:0002194,1.11e-22,59;CL:0000576,1.11e-22,59;CL:0000040,1.11e-22,59;CL:0000559,1.11e-22,59;CL:0000839,1.64e-22,66;CL:0000766,7.89e-22,72;CL:0000473,8.20e-18,48;CL:0000234,8.20e-18,48;CL:0000763,2.05e-17,108;CL:0000049,2.05e-17,108;CL:0000860,1.96e-15,42;CL:0002057,1.96e-15,42;CL:0000542,4.32e-14,53;CL:0000051,4.32e-14,53;CL:0000838,1.14e-13,52;CL:0000945,5.41e-12,24;CL:0000826,5.41e-12,24;CL:0000236,2.79e-10,14;CL:0000134,1.69e-08,354;CL:0000451,2.36e-08,10;CL:0002320,1.46e-07,361;CL:0000990,3.55e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-11;42!CL:0000051;1.16e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.14e-27!102;UBERON:0003061!4.14e-27!102;UBERON:0002193!1.72e-26!112;UBERON:0002371!1.09e-21!80;UBERON:0001474!4.33e-19!86;UBERON:0002405!3.37e-18!115;UBERON:0004765!1.41e-16!101;UBERON:0001434!1.41e-16!101;UBERON:0002204!5.43e-08!167;UBERON:0007023!3.17e-07!115;UBERON:0003081!3.98e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.82e-28,98;UBERON:0003061,1.82e-28,98;UBERON:0002193,4.32e-28,108;UBERON:0002405,9.48e-24,93;UBERON:0002371,4.69e-23,76;UBERON:0001474,2.74e-20,82;UBERON:0004765,5.04e-18,90;UBERON:0001434,4.82e-16,100;UBERON:0003081,3.98e-09,203;UBERON:0002204,1.66e-07,167;UBERON:0007023,3.64e-07,114 | |||
|phase1_expression=1.63510541343501,1.2846031433459,1.9733616573436,2.00146596706261,0.446961094427288,0.872338524100369,2.53299878168311,0.631719873426831,0.522371256399677,0.737201809504527,0,1.09220686065086,1.05506791291381,2.35156070624089,0.662794751455832,1.34465029290355,2.41077811209591,1.46062018077475,0.487932798790507,0.861847406537515,1.02000345622126,0.626909442956176,2.57612388417951,2.6006140763848,1.25542639594803,5.65459202534839,5.82914185094615,5.58846547327123,4.32700704533794,6.90892916574983,7.89562228911988,0,0.30120591877825,0,0.387336002901508,6.96629239188365,7.34001098337118,9.97191735357379,7.2196001089251,8.02940221648652,15.6740831967947,8.09734165047449,10.8181738406358,8.14230137165562,7.17964293008738,4.85168122375632,4.18372266430232,4.11167888021826,3.09706370895104,3.74000110018796,5.63553554364021,5.67557351732605,4.48169384957604,7.10033151942209,5.41705946377367,3.9530891303947,2.45615535052061,3.14612878223118,4.89734227793444,4.17207735198922,6.39337125799041,6.26717470354761,7.57961898962201,7.6720455095885,4.64334781805734,3.40431134814684,1.86846674698672,5.27622197039161,2.08593167368081,6.73285418585862,5.44859552370032,5.89244217580104,6.96217252369946,19.2242310543867,21.0478256965393,14.4664465400779,16.8492946719743,16.5194582125657,21.5372286174087,13.1105862120974,13.9241674039363,14.6131323011707,43.9990611153307,34.4067325095143,26.6852776159066,36.6987991407196,32.031678962881,37.9336610369959,31.0691090208885,25.7594513724548,27.891435486363,27.6001479004341,26.759125968766,3.96513985737078,2.80254281490768,7.90152254325231,6.68813218387032,3.14408610199332,2.87842098599313,8.52651126492458,8.47397893247335,8.99550830895993,3.89653456815823,7.91014243884732,7.36514768687093,9.96902525626295,8.93652750424551,8.45402710189456,8.58391693895196,2.46656856905514,2.21080014228679,7.24507714337631,5.04174314751005,9.89901063931938,3.1360657141493,4.87230173599535,5.74830740402882,9.27794102803101,12.1449452169361,7.96413535810242,4.55758417699493,4.75226022224187,5.87242964403314,6.65530378002976,2.49861453104692,7.81364931745256,4.92676798152628,4.23374160771938,4.27904313253612,2.89648807765598,2.43806866313962,4.02420515822182,1.40648818027883,1.0843174571537,1.50401373190767,1.59331170856906,1.5905718941022,2.43317435151318,1.98523116044542,1.55210578223795,1.05401742831751,4.25681995367566,0,0.741568885568859,16.8764644700435,18.4577521537223,15.6890393412261,14.0709468340152,16.0158575018436,10.4008100372278,1.59009925893364,0.860234595106124,0.694281003215189,0.56530794192401,0,0.825354125820202,0.208994966536811,2.58416759169329,2.49036383880697,3.68192674041137,0.805658634218294,2.28081631715554,1.70843440283719,1.47065232138347,0.81014194788176,3.03619076165871,0.44905874525234,1.80178368773316,0,0,1.46561395144326,1.31780417436063,0,0.872188104285069,3.47880366186723,1.13967460498122,3.04541115870403,3.15520282823695,2.83734705758686,0.560677600142307,1.06748995729705,0.49333509683432,1.55605517699883,1.21239604862719,1.30769522490767,0.756787138224657,1.72852777344,0.70296429550139,0.312160076830321,0,1.64393548606981,0.469737994575059,0.971237666208789,0.842704840213491,2.85815839756851,1.10550885580591,2.16984140469107,1.18800285728205,3.95627086845691,0,0,1.68336113954066,0.625592599359821,1.93944880838928,2.19488810440419,0.612975591598039,1.65261864797256,1.47461838108027,1.97328599257748,1.49490172172997,2.7551147150743,3.60109315301283,1.8549455262919,2.06112432036503,2.23340227597908,4.21940830603166,1.55899208257918,2.52433774244115,3.31379635112278,2.90962902273861,2.13005755509969,1.61203357164224,2.20428770003634,2.12586938479627,2.45471508531751,2.00763216772303,0.365921118388786,0.530119073285941,0.464775771478074,0.621966330092223,0.252320850875628,0,1.56449532329816,2.57296375277154,1.38134921352481,1.39310378409594,1.44375896333917,1.77460200059766,2.52877035117153,1.20505514941741,1.65440959098591,1.52515610864684,0.474541238222193,0.943819157121151,1.76599318612811,0.769494313892781,1.4763109092493,0,0.8231480226628,0,5.07020139287323,4.91413608338813,5.31710916013264,0,3.32068784066407,0.514703430895577,2.30475599358114,1.1240175325762,0.402115889646523,2.87024179991442,0,1.03993478527958,0,1.15930404975077,0.587043471179108,4.33099343283221,1.85194205030644,2.47330397904978,0.790204397959275,0,10.5873312617581,4.44608103764552,5.64798416697167,1.87467667973554,3.02367830757947,2.26840155587818,1.79117045405697,0.871901815541886,0.766765358330422,5.91195885475132,3.25779205848936,5.80518723514162,7.92659743793288,7.70078843900918,5.84180627487955,4.58386110669933,5.86087236050235,1.71072446022705,7.40357947463929,11.7133792559128,11.4330573052231,0.784917590417525,0.43596006883328,1.3200891447771,1.03417372606222,0,0,1.86156681609409,1.04007436911366,0.514414748524284,0,0.799266537048298,1.00084595560703,0,0.823240336780769,1.62868092146868,1.06617584622764,1.58390374586686,1.80863626235752,1.74306691720059,0.699810938274399,4.86495122564762,7.03159928004977,10.5416969741516,0.479249710983165,0,1.42636905040718,2.02693829334611,2.05476322550383,2.14873155887875,0.672510863961164,5.12279976525011,1.72502059887614,3.20857590699371,2.03275699377971,0,0,1.00509759200609,1.91381625495949,1.49801404789436,0,0,1.10422342547226,1.50051156317903,0,4.36738809214695,2.49800584316026,2.68094105557689,3.16281820480326,1.80567659836631,0,1.03473071292505,1.99267679560631,0.553107505625109,4.34418072340414,0.587403472388222,0,9.09779314940704,7.11856862701436,8.64493218207899,1.5156378572313,1.66435439510497,0.604780586659361,1.24053903909388,2.60885354589706,0.561320188866147,2.17836553734692,1.02341449813341,0.482561763430822,1.48418066444991,1.69630663182921,1.42049380250502,2.7101961484557,1.03850885836724,0.929683027679674,0.846016147141356,1.40354529212299,1.56537681191024,1.95184561879831,1.27463817604702,0.917870904715969,0.451199612907412,1.00119938235739,0,0,2.32213583564327,1.13733384070897,0.680374821106063,1.72732732881711,0,0.541892875087706,1.50506932156456,0.764628819135115,0,1.11937377361089,0.219259876645935,0.522870902049801,0.256450125116389,0,0,7.93415789687461,1.09883357782012,2.14524699793529,1.72279661398852,3.90036147621913,3.21367859688319,2.03008508413456,1.07834031980251,0.767518373630648,0.275673144969061,3.00776685631166,2.61030049045611,0.681813019328807,1.78064071293475,0.991709492165869,0.576570202095319,7.40153732468588,1.4162089319777,0.464845549297286,0.94443704049192,2.0911118104818,2.46426864140871,1.59691809095107,0.869932992075073,1.48259375283136,0.572499546967965,2.60510858551767,3.79655309662471,0.762520775695299,0,1.28381696410176,3.5002357271853,0,1.61885211824983,0.54907405947211,0.589062011728432,1.41527737101321,1.58510321173008,0.842516912477962,0.48763373908959,3.89941583410055,2.11300293513511,1.36499911407986,1.1312434556297,1.13008116620243,1.65409603063837,3.98063385144732,1.31535265576129,0,0,2.23201414658974,2.78841148289775,1.69017361519345,1.14729081763241,1.47373561519682,1.426684205925,1.06428319221179,2.74439925886963,3.29294892959902,0.379473173765715,0,1.53955380360819,0,1.08890984861323,7.34321646058877,1.29151611801369,0,2.21715076768338,2.29723400206959,3.55213326462519,3.0585488285695,5.12682468456746,9.52927101831156,12.752230465672,2.59389324477087,4.32025149790492,11.1037524681198,0.534120355637366,0.962479855263359,2.45040215981032,7.61793018015447,8.94469120453958,1.28055318027145,0.159426272728822,2.99369057149225,3.63860203251497,0.846694330895531,0.324621940274555,1.68478306868075,5.24939761776342,0.94007937463814,0,2.03150133361924,10.1170487315331,13.3187806746091,25.1249280237293,9.27464430840565,17.8199643298906,14.538947013007,13.3479313369527,5.66625476665917,1.39203086947621,0,0.811367035427949,0,1.4098700508785,2.24568648489864,5.42080263306008,0.36408156524854,10.0299045849731,0.852408440419239,2.14870036263921,1.78178808499583,3.68592842519078,2.98244294329889,1.68803299692615,1.11308705022906,1.15362711958732,3.3780065300479,3.98495976502139,9.39365312805902,0.503865495708552,5.31797149011205,6.64657949489775,2.17727711363265,0.808815160325942,0,11.7661645152181,3.94573622547734,2.3948309234694,1.11136990144637,1.93866549219044,1.48428957058962,3.99227596002388,0,0.874599999961957,5.79999660347835,2.16207551742449,2.79679015322043,0.709163045303809,0,1.16641845353302,0,0.885741385813839,2.41192877250816,0,3.31737779793674,2.06883333267483,1.31631238292384,1.63407695278485,4.3221360726367,7.8489263673873,0.341826167541004,0.23056390438806,0.897576444097721,1.4124158349861,1.5950057986596,2.56473261525214,2.13213910407454,0,1.2558420511602,2.6593869104025,0.451191321234361,0.588187602953219,0.167821586975843,0.569261198172555,2.86085842164682,0.210998064528027,0.489698424477443,0.565412285735763,0.649165919226273,10.9478812418636,6.45740220874376,7.33236173920351,2.96521128680622,2.34771483998355,3.86361213170185,2.96564985114979,4.01288823649394,0.702793337176017,8.94028467156763,0.782658475728359,0.971121518136371,5.52418163989147,6.04953580243319,0,4.61262031287962,0.901940516486955,0.518440956986236,1.99396161812156,0.661983911750998,0.627865836814451,0,0.569219092059585,1.52542140314453,0.520679215005393,4.89961987071888,1.91530254476886,7.68797340264933,1.20390222730132,2.41890828222713,2.92357268344742,2.05288642633023,9.40793459937668,0,0.90392296312213,1.09633539717401,1.19228767021794,1.39283751102933,5.08433595110488,0.0801588202515337,6.40358984218058,0.599428828746391,0.576361668616424,0.458146384663663,0.343189995723929,0.576219191952599,1.61528296235062,2.35694034616795,0.815425236441684,0.523014231561666,1.01998217636322,0.577901179803038,1.80126086612937,3.28572909340783,22.994385852055,2.14882720709979,8.41239533693806,4.18923601908381,4.35404805622199,4.30723814746088,0.998395002494955,1.28767814440971,1.33902874465124,2.75452237195578,0.720599767084807,0,2.12714592229504,1.483485450861,1.81989568406299,1.77169466726548,5.58843991634178,1.59045937961861,2.17925449778521,0.160753148465019,0.550157746388935,0.83088067605837,12.8235118184355,10.0594254092533,1.39723980313457,2.68347750079413,2.83700546277113,1.83591058472493,2.42880773994635,0.896436696664224,0.959575986597226,6.4322579373603,0,1.017074150619,0.542999601753713,0.864221491201268,1.95952416065645,0,0.82092520749339,1.70388021785422,1.01980882368113,3.66380584195206,5.30027555648885,1.93924434542326,1.98348902614035,0.513260513652988,1.40963004463334,10.8923160819049,8.01741956008296,21.9546699334014,6.94632430536731,2.76656284657122,6.33321511580659,6.38341257770182,3.26410682021684,4.2617281983859,1.53172788381731,1.63936315354902,1.09937867375164,0,1.22026264901963,2.1282458220105,1.72022758707021,5.21366542223206,2.11127770000704,0.830091809617385,1.12482367165896,2.12308764558307,2.56918800190471,2.58792401667989,0,0.434763085832475,1.79105763464249,1.63599316893057,2.77402930751307,1.51522404220071,1.25783950876288,4.44905610798268,1.14420034198462,1.20984739010591,1.39893480524502,1.92211694986524,2.07085797312813,2.24901556081802,2.01841843939137,1.65882483136342,1.32920857278997,2.60872530905867,1.6528336989694,1.90402606084398,2.84809513243263,1.63663793282303,1.07410557042488,0.928067519756987,2.78667122089031,2.80019435264208,2.74716564146234,3.36749488765919,1.26184898228651,0.192619830407303,0.428883182749851,0.260994291965212,1.13352962756136,1.389134845943,4.40526068111642,0.179088841081487,0.308801447160972,0.657852148736121,0.883445729729405,0,1.35153952522458,0,0,0.303859956177382,2.48865185073115,23.9678179872448,17.936753442304,17.3379317911195,0.655219697692825,0.737318726261158,1.26787274015176,2.19986135440423,4.80112783623634,8.61074898304078,1.70254786070051,0,0.699397538597222,1.24415452006595,0.895260599125562,2.91126990771041,0.786329709279482,0.109209638192014,0.169732529954025,0.425149840203366,5.32923786313709,0,0.636008701306837,4.7317047000752,0.80057074828547,1.41070377476274,1.531227386766,1.73418907760441,1.41696576325585,2.39450788585727,1.64093091392604,0.504143392443436,0.622415272177961,3.06803726700517,2.85538840518309,2.84628383652974,0.353909170043221,6.23657234973709,0.346576998451015,1.52552838186867,0.690359926060101,2.18807844327902,4.51261970095543,0.40341013740704,0.781514011233092,0.261906694481422,0.982631505060581,1.03499260351932,1.2832141077495,1.56215619722769,2.06686796501184,1.58539525484767,2.7348740450911,1.09651553371436,9.42801238939659,1.93458368795583,3.57734797390867,2.14280734351315,2.01770233331294,3.03482802118316,3.18727067891817,0.975726071789027,4.49412551467539,2.05785611324902,2.92269851800376,1.38122824481983,0.945550727071746,0.556157009460346,4.78807866388135,0.942693539496011,1.96190514319652,2.73947616152849,0.863710364874486,0.47775168788705,6.93322478513567,0.316027223465453,0.929931402945002,0.347716544605159,4.00855682365126,3.9371071190977,6.65802060666405,10.3688949272114,3.44181887056222,1.30165200803622,1.53384128566484,4.23387050190929,1.14553434272025,0.62041277132864,0,0.671132590786754,1.27595303699816,0.365753774946808,2.58971534875158,1.33461648913121,0,7.77137588894623,1.16969731731053,0.198950775161368,0.356760272332706,1.92008339466232,0.219881033490858,1.81155412280008,6.63697759728324,2.84127428655144,0.940634592723046,7.59959797437107,1.88541237681301,3.72986087518396,5.04978880556046,0.8453114551668,1.35941691750254,10.3382309777839,8.25060966061788,16.5902318835382,3.39252483350749,2.47026410200984,2.72820646743172,0.730336388246517,7.33966853447265,4.15684791139209,0.631086248772738,1.01987235286372,0.872701380680755,4.2322147241232,1.48798007266701,3.23522940041993,2.16313281061895,0.504665699340316,1.52971800749174,1.39368351112581,1.63182127587171,1.87052183685892,3.21632148371957,2.005660314339,2.65225443763838,1.33982065078089,2.48750831837634,4.13731983447581,8.9558272398412,2.85677317756488,2.19602293442421,2.85543685760946,2.57903283935411,3.05506359735192,2.82964064541507,6.31378568901188,2.39563310759697,12.2580736486549,5.4508876098434,1.99596213927608,3.01192093860606,0.853818767021724,1.9307228228694,2.24563005266467,2.34640942403454,3.30051899293739,6.91723503136755,3.32878387092756,7.84967795005002,4.80852738454849 | |||
|short_description=p2@GANC | |||
}} |
Revision as of 23:08, 11 January 2014
Short description: | p2@GANC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GANC_5end |
Coexpression cluster: | C813_CD19_CD14CD16_CD14_Macrophage_Monocytederived_pancreatic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000318010, ENST00000440615_5end |
EntrezGene: | GANC |
HGNC: | 4139 |
UniProt: | Q8TET4E7EWB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.82e-28 | 98 |
blood island | 1.82e-28 | 98 |
hemolymphoid system | 4.32e-28 | 108 |
immune system | 9.48e-24 | 93 |
bone marrow | 4.69e-23 | 76 |
bone element | 2.74e-20 | 82 |
skeletal element | 5.04e-18 | 90 |
skeletal system | 4.82e-16 | 100 |
lateral plate mesoderm | 3.98e-09 | 203 |
musculoskeletal system | 1.66e-07 | 167 |
adult organism | 3.64e-07 | 114 |