FFCP PHASE1:Hg19::chr15:34630056..34630076,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-69bp_to_ENST00000559664_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_SLC12A6_5end | |||
|id=chr15:34630056..34630076,- | |||
|ontology_enrichment_celltype=CL:0000037!4.95e-60!172;CL:0000566!4.95e-60!172;CL:0002032!1.03e-57!165;CL:0000837!1.03e-57!165;CL:0000988!6.45e-55!182;CL:0000763!1.07e-53!112;CL:0000049!1.07e-53!112;CL:0000738!8.60e-46!140;CL:0000766!4.19e-43!76;CL:0002087!1.26e-40!119;CL:0002031!1.89e-40!124;CL:0000557!2.01e-38!71;CL:0002009!3.30e-38!65;CL:0002194!6.19e-37!63;CL:0000576!6.19e-37!63;CL:0000040!6.19e-37!63;CL:0000559!6.19e-37!63;CL:0000839!5.45e-36!70;CL:0002057!4.15e-35!42;CL:0000860!2.20e-32!45;CL:0000134!2.30e-16!358;CL:0002320!7.15e-16!365;CL:0000219!9.06e-12!390;CL:0000094!4.51e-08!8;CL:0000034!4.93e-08!444;CL:0000048!8.51e-08!430;CL:0000723!1.37e-07!436;CL:0002393!1.43e-07!9;CL:0002397!1.43e-07!9;CL:0000838!8.43e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.37e-56;33!CL:0002057;3.37e-56;33!CL:0000473;1.26e-54;39!CL:0000234;1.26e-54;39!CL:0000576;5.64e-38;48!CL:0000766;2.45e-34;69!CL:0000763;1.69e-22;100!CL:0000094;7.36e-16;8!CL:0000738;1.13e-15;136!CL:0002087;8.72e-14;104!CL:0000081;1.31e-13;11!CL:0000988;4.48e-12;177!CL:0002393;6.77e-11;6!CL:0002397;6.77e-11;6!CL:0000235;1.35e-10;6!CL:0000840;4.04e-10;5!CL:0000775;9.35e-08;3!CL:0000451;7.23e-07;10!CL:0000219;8.44e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.74e-85,72;CL:0000763,9.30e-84,108;CL:0000049,9.30e-84,108;CL:0000473,6.66e-82,48;CL:0000234,6.66e-82,48;CL:0002009,3.20e-77,61;CL:0000557,6.03e-75,67;CL:0002194,2.02e-74,59;CL:0000576,2.02e-74,59;CL:0000040,2.02e-74,59;CL:0000559,2.02e-74,59;CL:0000860,2.83e-72,42;CL:0002057,2.83e-72,42;CL:0000037,2.87e-72,168;CL:0000839,2.37e-70,66;CL:0000988,3.20e-69,177;CL:0002032,1.61e-68,161;CL:0000837,1.61e-68,161;CL:0000738,4.61e-66,136;CL:0002087,1.79e-54,115;CL:0002031,7.38e-53,120;CL:0000134,5.79e-23,354;CL:0002320,4.52e-22,361;CL:0000219,6.17e-19,386;CL:0000034,7.27e-16,441;CL:0000094,7.70e-16,8;CL:0000048,3.98e-15,427;CL:0000723,1.33e-14,433;CL:0000081,1.15e-13,11;CL:0002393,6.37e-12,9;CL:0002397,6.37e-12,9;CL:0000235,1.27e-10,6;CL:0000840,3.65e-10,5;CL:0001029,3.65e-10,5;CL:0000775,9.37e-08,3;CL:0000451,7.47e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.12e-52;42!CL:0000049;1.82e-23;108 | |||
|ontology_enrichment_disease=DOID:8692!3.88e-10!31;DOID:1240!1.34e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.48e-42!102;UBERON:0003061!6.48e-42!102;UBERON:0002193!2.90e-38!112;UBERON:0002371!3.73e-32!80;UBERON:0001474!1.16e-28!86;UBERON:0002405!2.56e-23!115;UBERON:0004765!9.82e-22!101;UBERON:0001434!9.82e-22!101;UBERON:0002384!1.54e-14!375;UBERON:0003081!2.15e-10!216;UBERON:0000178!5.19e-08!15;UBERON:0000179!5.19e-08!15;UBERON:0000463!5.19e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.00e-17;15!UBERON:0000179;1.00e-17;15!UBERON:0000463;1.00e-17;15!UBERON:0002390;7.63e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.94e-77,98;UBERON:0003061,2.94e-77,98;UBERON:0002193,2.64e-68,108;UBERON:0002371,3.67e-64,76;UBERON:0001474,2.80e-58,82;UBERON:0004765,1.19e-51,90;UBERON:0002405,2.13e-51,93;UBERON:0001434,7.41e-45,100;UBERON:0003081,2.37e-28,203;UBERON:0002384,7.43e-21,371;UBERON:0002204,1.76e-20,167;UBERON:0000178,1.17e-17,15;UBERON:0000179,1.17e-17,15;UBERON:0000463,1.17e-17,15;UBERON:0000926,9.90e-12,315;UBERON:0004120,9.90e-12,315;UBERON:0006603,9.90e-12,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410502947249729,0.236132343941038,1.57345710739562,1.15148819429164,4.33485145285013,0,0,0,0.0774672005803016,0,0.880801318004542,7.20194031091441,5.81578897663411,7.59538047505481,0.671746422719773,0.647787332037959,0.257575567634187,9.45088552067171,15.1150377475524,13.8272914877055,6.27558399645349,8.63452564845834,11.7688420940139,5.46615545412086,8.19714260893122,6.14853797710322,9.65287906062532,6.45484683583826,5.41705946377367,8.094420600332,8.46009065179322,10.1125568000288,5.81559395504715,8.34415470397843,12.1474053901818,7.25672860410775,7.38015533200038,9.80316926225197,4.93355705668593,10.7803192691317,7.4738669879469,6.28121663141858,9.38669253156363,6.95004303056373,5.44859552370032,5.15588690382591,6.0127853613768,1.90129757680748,2.12604299965044,1.04829322754188,4.38081661471331,4.8056605709282,6.26829788118613,1.71007646244749,0.99458338599545,1.64397738388171,5.27988733383968,1.09227722252426,0,3.41384178053206,2.00197993518006,2.87376219977242,0.661044872784862,0.954053754535364,3.98449078376614,0.587237189370939,1.14681968437569,1.32171328579026,3.92355994087075,1.31692042387539,0.786839080455332,2.35806457649499,0.616804496998528,0.501559486172034,0.32592226663359,0,0,0.445641827540694,1.47302953737419,1.10766947291811,0.812411591295047,0.768547918354051,0.520237390239513,0.493313713811028,0,0.579606171470105,0.14828656316206,0.267540828089713,1.04535523804977,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0.651083453856419,0,1.05402583354441,0.255973222308837,0,0.710331756132051,0.821127996921047,0.201606743224732,0,0.434473211648397,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0,0,0.087834785693126,0.196468613246569,0,0,4.86821090482025,4.35324343248168,2.26028532882071,1.66943437013739,0,1.11437250398869,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,54.0299711487859,77.5560528296651,0.436094052142534,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,4.91408956792399,2.82399208348584,0,0.16798212819886,0,0,0,0,2.95597942737566,0.792435906119034,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,3.64871341923571,2.00902836572851,2.10833939483032,1.67737398844108,0,0,0,0.410952645100767,0,0.112085143993527,1.97030760201927,0.862510299438069,0.256686072559497,0,0,0,0,0,41.9443933410422,20.9413021442817,59.2614184213531,0.12269149171914,0,0.271265023699736,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,2.27444828735176,4.31428401637234,4.05564719653088,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,1.09629938322967,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,8.11916174771471,15.2927441428475,8.54470780761244,8.09988036556483,6.17043409629291,11.0240462902762,12.9607544937148,11.8968776444141,0,0,0,0,0,0.497992903438899,0,0.59873811429845,0.957526850661834,4.02179807175377,0.324621940274555,5.05434920604226,1.59764275323235,0.156679895773023,2.50634477090067,2.53937666702405,1.605880751037,0.201799707191048,0.425846237690326,1.71752672377882,0,0.223676107892416,0,0.586164286206121,0.278406173895242,2.46174797895425,0.270455678475983,0.99921590399346,1.4098700508785,0,0.293016358543788,0,0,0,0.95497793895076,0,0,0,0.140669416410513,0.222617410045812,0.329607748453519,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,1.24415835064723,0,0,0.511572370226872,0.197286811273867,4.7896618469388,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.784901281975124,1.32969345520125,0,0.19606253431774,0,0,0.794682894901893,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.695052375913368,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0,0,0,0,0.229073192331831,0.171594997861965,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0.684526894459965,6.38732940334862,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0.335917362433631,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,1.1248694577575,1.5476039091159,0,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.55975789423744,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.427149650270779,0.157204305099666,2.07119527673598,0.992332043623902,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.372578417648301,0,0,0,0,1.17632909849086,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.385375350578757,0,0.159633859057151,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0.171488009437418,0.271878931907327,0.0657727735628491,0,0.222462803784138,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.3414369541879,0,0,0,0.426067023795788,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0.297046400327086,0,0,1.2217909337381,0.644578879735772,0.199882311849858,0,0.352894871715692,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0.20686599172379,0.426467963801962,0,0.0645889098360061,0.31037357147929,0,0,0,0.217716747896961,0,0.471464371102113,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p8@SLC12A6 | |||
}} |
Revision as of 22:44, 11 January 2014
Short description: | p8@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC12A6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -69bp_to_ENST00000559664_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.94e-77 | 98 |
blood island | 2.94e-77 | 98 |
hemolymphoid system | 2.64e-68 | 108 |
bone marrow | 3.67e-64 | 76 |
bone element | 2.80e-58 | 82 |
skeletal element | 1.19e-51 | 90 |
immune system | 2.13e-51 | 93 |
skeletal system | 7.41e-45 | 100 |
lateral plate mesoderm | 2.37e-28 | 203 |
connective tissue | 7.43e-21 | 371 |
musculoskeletal system | 1.76e-20 | 167 |
blood | 1.17e-17 | 15 |
haemolymphatic fluid | 1.17e-17 | 15 |
organism substance | 1.17e-17 | 15 |
mesoderm | 9.90e-12 | 315 |
mesoderm-derived structure | 9.90e-12 | 315 |
presumptive mesoderm | 9.90e-12 | 315 |