FFCP PHASE1:Hg19::chr15:34629922..34629965,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHW9 | |||
|association_with_transcript=0bp_to_ENST00000354181,ENST00000458406,ENST00000558589,ENST00000559484,ENST00000559523,NM_001042494,NM_001042496,uc001zia.2,uc001zib.2,uc001zic.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SLC12A6_5end | |||
|id=chr15:34629922..34629965,- | |||
|ontology_enrichment_celltype=CL:0000738!5.24e-17!140;CL:0000037!7.24e-16!172;CL:0000566!7.24e-16!172;CL:0002057!1.19e-15!42;CL:0002087!4.52e-15!119;CL:0002031!1.07e-14!124;CL:0002032!1.58e-14!165;CL:0000837!1.58e-14!165;CL:0000988!2.24e-14!182;CL:0000860!1.77e-13!45;CL:0000766!2.97e-10!76;CL:0000763!3.92e-08!112;CL:0000049!3.92e-08!112;CL:0002009!6.10e-08!65;CL:0000557!7.15e-08!71;CL:0000839!1.33e-07!70;CL:0002194!1.41e-07!63;CL:0000576!1.41e-07!63;CL:0000040!1.41e-07!63;CL:0000559!1.41e-07!63;CL:0000838!1.51e-07!52;CL:0000542!3.94e-07!53;CL:0000051!3.94e-07!53;CL:0000791!8.89e-07!18;CL:0000789!8.89e-07!18;CL:0002420!8.89e-07!18;CL:0002419!8.89e-07!18;CL:0000790!8.89e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.86e-14;33!CL:0002057;1.86e-14;33!CL:0000473;1.17e-09;39!CL:0000234;1.17e-09;39!CL:0000576;3.08e-09;48!CL:0000791;1.44e-07;18!CL:0000789;1.44e-07;18!CL:0002419;1.44e-07;18!CL:0000094;7.67e-07;8!CL:0002087;8.41e-07;104!CL:0000766;9.62e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.94e-21,136;CL:0000037,5.34e-19,168;CL:0002087,2.77e-18,115;CL:0000860,5.53e-18,42;CL:0002057,5.53e-18,42;CL:0002031,2.46e-17,120;CL:0000988,3.14e-17,177;CL:0002032,4.29e-17,161;CL:0000837,4.29e-17,161;CL:0000473,3.01e-14,48;CL:0000234,3.01e-14,48;CL:0000766,4.73e-13,72;CL:0002009,1.75e-10,61;CL:0000763,5.03e-10,108;CL:0000049,5.03e-10,108;CL:0002194,5.11e-10,59;CL:0000576,5.11e-10,59;CL:0000040,5.11e-10,59;CL:0000559,5.11e-10,59;CL:0000557,5.64e-10,67;CL:0000839,1.25e-09,66;CL:0000838,6.88e-08,52;CL:0000791,7.75e-08,18;CL:0000789,7.75e-08,18;CL:0002420,7.75e-08,18;CL:0002419,7.75e-08,18;CL:0000790,7.75e-08,18;CL:0000542,1.63e-07,53;CL:0000051,1.63e-07,53;CL:0000094,8.82e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-13;42!CL:0000790;1.44e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.34e-32!115;UBERON:0001049!4.13e-20!57;UBERON:0005068!4.13e-20!57;UBERON:0006241!4.13e-20!57;UBERON:0007135!4.13e-20!57;UBERON:0002616!6.16e-18!59;UBERON:0002780!1.13e-17!41;UBERON:0001890!1.13e-17!41;UBERON:0006240!1.13e-17!41;UBERON:0003080!2.50e-17!42;UBERON:0000955!5.45e-16!69;UBERON:0006238!5.45e-16!69;UBERON:0001017!2.54e-15!82;UBERON:0005743!2.53e-14!86;UBERON:0001893!2.74e-14!34;UBERON:0002020!3.81e-14!34;UBERON:0003528!3.81e-14!34;UBERON:0002791!9.36e-14!33;UBERON:0000073!2.91e-13!94;UBERON:0001016!2.91e-13!94;UBERON:0001869!3.78e-13!32;UBERON:0002619!3.64e-11!22;UBERON:0001950!4.26e-11!20;UBERON:0002390!4.94e-11!102;UBERON:0003061!4.94e-11!102;UBERON:0003075!9.05e-11!86;UBERON:0007284!9.05e-11!86;UBERON:0002193!3.33e-10!112;UBERON:0000956!1.10e-09!25;UBERON:0000203!1.10e-09!25;UBERON:0002346!1.40e-09!90;UBERON:0003056!2.74e-08!61;UBERON:0002371!7.78e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.73e-15;41!UBERON:0001890;8.73e-15;41!UBERON:0001893;1.44e-13;34!UBERON:0001950;2.15e-13;20!UBERON:0002791;3.72e-13;32!UBERON:0003528;3.73e-13;34!UBERON:0002020;3.73e-13;34!UBERON:0000073;4.50e-13;53!UBERON:0002616;4.50e-13;53!UBERON:0001869;4.72e-13;32!UBERON:0002619;6.58e-13;22!UBERON:0007023;1.90e-10;114!UBERON:0000956;2.83e-10;25!UBERON:0000203;2.83e-10;25!UBERON:0001017;6.21e-09;75!UBERON:0000955;1.36e-08;68!UBERON:0001016;1.72e-07;83!UBERON:0000125;3.04e-07;9!UBERON:0002308;3.04e-07;9!UBERON:0000178;5.97e-07;15!UBERON:0000179;5.97e-07;15!UBERON:0000463;5.97e-07;15!UBERON:0002420;6.24e-07;9!UBERON:0007245;6.24e-07;9!UBERON:0010009;6.24e-07;9!UBERON:0010011;6.24e-07;9!UBERON:0000454;6.24e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.84e-35,114;UBERON:0001049,2.31e-23,56;UBERON:0005068,2.31e-23,56;UBERON:0006241,2.31e-23,56;UBERON:0007135,2.31e-23,56;UBERON:0000073,1.02e-21,53;UBERON:0002616,1.02e-21,53;UBERON:0002780,6.78e-20,41;UBERON:0001890,6.78e-20,41;UBERON:0003080,6.78e-20,41;UBERON:0006240,6.78e-20,41;UBERON:0000955,4.52e-17,68;UBERON:0006238,4.52e-17,68;UBERON:0001017,2.77e-16,81;UBERON:0001893,9.22e-16,34;UBERON:0003528,1.36e-15,34;UBERON:0002020,1.36e-15,34;UBERON:0001016,1.34e-14,89;UBERON:0002791,1.89e-14,32;UBERON:0001869,2.20e-14,32;UBERON:0002390,2.59e-14,98;UBERON:0003061,2.59e-14,98;UBERON:0001950,2.43e-13,20;UBERON:0002193,2.94e-13,108;UBERON:0003075,7.28e-13,82;UBERON:0007284,7.28e-13,82;UBERON:0002619,8.08e-13,22;UBERON:0002346,2.57e-11,86;UBERON:0000956,3.33e-10,25;UBERON:0000203,3.33e-10,25;UBERON:0003056,3.70e-10,61;UBERON:0002371,8.09e-09,76;UBERON:0002405,8.39e-09,93;UBERON:0001474,1.20e-07,82;UBERON:0000125,3.50e-07,9;UBERON:0002308,3.50e-07,9;UBERON:0010371,3.63e-07,104;UBERON:0000178,5.52e-07,15;UBERON:0000179,5.52e-07,15;UBERON:0000463,5.52e-07,15;UBERON:0002420,5.89e-07,9;UBERON:0007245,5.89e-07,9;UBERON:0010009,5.89e-07,9;UBERON:0010011,5.89e-07,9;UBERON:0000454,5.89e-07,9 | |||
|phase1_expression=0.908391896352783,0.428201047781966,1.9733616573436,2.00146596706261,0,0.872338524100369,0,0,1.04474251279935,0,0.697801167972428,0.218441372130172,0,0.866364470720326,1.32558950291166,0,1.20538905604795,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0.626909442956176,0.85870796139317,0.273748850145768,0.627713197974014,0.840547463227464,0.738905305049512,1.25937250101887,4.72037132218685,3.0706351847777,3.56077083626975,0,0,0.369754010166788,0.619737604642413,1.84820002233648,2.34880351467878,4.43196326825502,9.82667792603694,5.4252717678963,0.223915474239924,1.29557466407592,0.77272670290256,7.99690313287606,9.44689859222024,10.6736986922639,5.11343881192506,4.93401465626191,4.64559556342655,3.16461631554365,3.07392847834921,2.83778675866302,3.7922024881028,3.22742341791913,6.77132432971709,5.83551252582075,6.00393530127261,4.94391665779186,0.612167784741805,4.8139354061414,7.03270838378945,6.92687730392104,5.78444607102732,9.37694451171927,2.61188314765726,1.70215567407342,2.4912889959823,4.01997864410789,6.25779502104242,5.64690996233303,2.42159801053347,4.41933163185078,4.43047342417238,2.74631872205524,1.70083439972035,2.30624510059213,3.70684482783434,5.40636814229423,4.8217676009124,1.71007646244749,2.18808344918999,0.91332076882317,3.51992488922645,1.63841583378639,3.55803701545422,3.84057200309856,2.80277190925209,4.59801951963587,2.64417949113945,1.90810750907073,3.41527781465669,5.28513470433845,3.82273228125229,9.25199300053181,6.72610275577843,0.790152254325231,7.27826149421182,5.89516144123747,5.75684197198626,6.18590032945509,3.91106719960308,3.31413464014313,13.6378709885538,5.23629147360316,5.89211814949674,4.65221178625604,10.5613506868356,6.02029202710673,6.63302672555379,4.93313713811028,6.35605040907451,6.0858648004361,5.78317596332036,8.56130649887082,4.18142095219907,6.23201384836614,1.53288197440768,4.81078423675682,4.04831507231205,2.54852331459277,1.95325036156926,5.70271226669025,4.06552821509986,3.71161172347813,3.74792179657038,4.02521328474829,3.28451198768419,3.83052812126992,4.81392352410313,5.06885413589796,0,0,0,1.0843174571537,1.00267582127178,1.15877215168659,0,0,0.378139268656271,0,0.175669571386252,14.5386773802461,0,1.48313777113772,0.97364218096405,1.21890816109487,0.930705723632056,3.81584998888547,2.28797964312051,3.34311751196608,0.993812036833525,0,0.694281003215189,0.56530794192401,2.09749718104953,0.550236083880135,0.835979866147242,1.29208379584664,1.77883131343355,0.66944122552934,1.61131726843659,0.760272105718513,0.488124115096339,1.47065232138347,0,1.16089646769304,2.46982309888787,1.35133776579987,1.53316637465883,0.949265659568129,0.732806975721629,127.827004912981,162.867710942297,0,0.496971951695318,0.633152558322899,0.926864265692532,2.0078563452417,0,0,0,0,0.622422070799533,0.942974704487816,0,1.51357427644931,1.15235184896,0,0.312160076830321,0.570471821544449,0.448346041655403,0.23486899728753,0,0.421352420106746,0.61246251376468,0.368502951935304,0.516628905878827,1.18800285728205,1.23633464639278,0,0.718618141816238,0.336672227908132,0.375355559615893,1.38532057742091,1.31693286264251,0.612975591598039,2.25357088359895,0.567160915800105,0.179389635688862,0.85422955527427,0.423863802319124,0.300091096084402,0.515262646192195,0.515281080091258,0.37223371266318,1.35021065793013,0.292311015483596,1.00973509697646,0.644349290496095,1.2931684545505,0.355009592516614,0.806016785821122,0.339121184620975,0.193260853163297,0.545492241181669,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0.505754070234305,0.482022059766964,0.330881918197182,0,0.71181185733329,0.674156540800822,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0,0.245976877086227,0.686271241194102,0.329250856225877,0,0,0,0.325808305310325,0,0,0.811512834825538,0.939269553886573,1.29929802984966,0,0.190254152234598,0.790204397959275,0,0.492434012174795,1.17002132569619,0.445893486866185,0,0.16798212819886,0.283550194484773,0,0,0,1.97065295158377,1.76096868026452,0.207328115540772,0.576479813667846,0.6312121671319,0.317489471460845,0.763976851116555,0,0,0,0,0.285826432630578,0.672786506072164,0.43596006883328,0.8800594298514,0.775630294546667,0,0,0.797814349754612,0,0.257207374262142,1.41849132023278,0.266422179016099,0.428933980974443,0,0,0.65147236858747,0,0,0.301439377059586,0,0.299918973546171,0,0,0,1.91699884393266,3.44585807502342,0,1.15825045334063,0.61642896765115,0.537182889719687,0.448340575974109,4.13764596424047,4.52817907204986,5.51875056002918,0.76228387266739,1.30139853857622,0,1.34013012267479,0.637938751653163,104.860983352606,86.7568231691672,171.982438075955,0.981531933753119,2.50085260529839,0.542530047399471,0.623912584592421,1.42743191037729,1.73472656537328,1.99140405487612,1.50473049863859,2.27407504055985,2.0694614258501,0.664225598535437,0.737476674166813,1.04260337361699,0.391602314925481,0.343143423810856,5.9962727575637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| |||
|short_description=p3@SLC12A6 | |||
}} |
Revision as of 22:44, 11 January 2014
Short description: | p3@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC12A6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000354181, ENST00000458406, ENST00000558589, ENST00000559484, ENST00000559523, NM_001042494, NM_001042496, uc001zia.2, uc001zib.2, uc001zic.2_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | Q9UHW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data