FFCP PHASE1:Hg19::chr15:31619570..31619615,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51621 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13672 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-154bp_to_ENST00000558921_5end | |||
|description=CAGE_peak_6_at_KLF13_5end | |||
|id=chr15:31619570..31619615,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.95e-29!76;CL:0000839!4.73e-26!70;CL:0000557!5.20e-26!71;CL:0002009!5.39e-25!65;CL:0002194!8.69e-24!63;CL:0000576!8.69e-24!63;CL:0000040!8.69e-24!63;CL:0000559!8.69e-24!63;CL:0002057!9.82e-21!42;CL:0000860!2.76e-20!45;CL:0000763!8.10e-20!112;CL:0000049!8.10e-20!112;CL:0000738!2.31e-17!140;CL:0002031!6.20e-14!124;CL:0000037!8.82e-12!172;CL:0000566!8.82e-12!172;CL:0002087!9.63e-12!119;CL:0002032!1.15e-11!165;CL:0000837!1.15e-11!165;CL:0000988!7.10e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-21;33!CL:0002057;2.04e-21;33!CL:0000473;1.50e-20;39!CL:0000234;1.50e-20;39!CL:0000576;1.10e-16;48!CL:0000766;1.71e-15;69!CL:0000094;1.61e-07;8!CL:0000763;9.11e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.91e-37,72;CL:0000839,1.18e-32,66;CL:0000557,1.36e-32,67;CL:0002009,5.06e-32,61;CL:0002194,2.05e-30,59;CL:0000576,2.05e-30,59;CL:0000040,2.05e-30,59;CL:0000559,2.05e-30,59;CL:0000473,2.29e-30,48;CL:0000234,2.29e-30,48;CL:0000860,5.85e-27,42;CL:0002057,5.85e-27,42;CL:0000763,2.29e-25,108;CL:0000049,2.29e-25,108;CL:0000738,7.39e-22,136;CL:0002031,6.89e-18,120;CL:0002032,1.58e-15,161;CL:0000837,1.58e-15,161;CL:0002087,1.95e-15,115;CL:0000037,2.10e-15,168;CL:0000988,1.34e-13,177;CL:0000094,1.22e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.05e-20;42!CL:0000049;1.03e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.58e-26!102;UBERON:0003061!8.58e-26!102;UBERON:0002193!5.70e-23!112;UBERON:0002371!7.98e-23!80;UBERON:0001474!2.59e-20!86;UBERON:0004765!1.94e-18!101;UBERON:0001434!1.94e-18!101;UBERON:0007023!2.81e-16!115;UBERON:0002405!1.95e-15!115;UBERON:0003081!1.88e-10!216;UBERON:0002204!5.37e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.30e-31,98;UBERON:0003061,5.30e-31,98;UBERON:0002371,5.69e-28,76;UBERON:0002193,1.63e-27,108;UBERON:0001474,1.18e-24,82;UBERON:0004765,3.50e-23,90;UBERON:0002405,5.38e-22,93;UBERON:0001434,7.27e-22,100;UBERON:0007023,1.92e-15,114;UBERON:0003081,1.68e-10,203;UBERON:0002204,8.76e-08,167 | |||
|phase1_expression=2.18014055124668,2.5692062866918,1.69145284915165,1.0007329835313,1.34088328328186,1.74467704820074,0,1.89515962028049,2.61185628199839,1.22866968250754,0,1.52908960491121,1.58260186937072,0.123766352960047,0.331397375727916,2.01697543935533,0,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0.382067028739756,0.57470412614962,0.314843125254717,3.14691421479123,3.83829398097213,5.41856431606266,0.919421224478927,0.90361775633475,0.739508020333575,0,0.142169232487422,0,3.87796785972314,8.62341124121609,4.55722828503289,1.79132379391939,2.59114932815184,2.57575567634187,6.83371722263954,7.17964293008738,4.85168122375632,8.13501629169896,4.93401465626191,2.16794459626573,4.02769349251011,3.33008918487831,2.60130452877444,4.82643953031266,4.51839278508678,1.35426486594342,4.70605848856512,4.91231070104122,2.47195832889593,4.89734227793444,4.49300637906531,3.83602275479425,9.89553900560148,5.18605509816243,4.68847225585964,5.5139755339431,3.97169657283798,4.35975574296902,5.27622197039161,4.69334626578181,2.6062661364614,5.44859552370032,1.47311054395026,2.21523671208619,1.05627643155971,2.12604299965044,1.04829322754188,2.69588714751588,3.45406853535464,1.28580469357664,1.71007646244749,4.77400025277816,1.46131323011707,1.75996244461323,0.546138611262131,0,0,0.400395987036012,0,1.32208974556972,0,2.27685187643779,1.76171156811282,0.764546456250458,0,2.24203425192614,0.263384084775077,0.196709770113833,1.96505381374582,0.411202997999018,0.668745981562712,0.32592226663359,0,1.94826728407911,1.22551502573691,0.883817722424512,0,1.35401931882508,1.5370958367081,0.520237390239513,1.15106533222573,0.829050053357545,0.579606171470105,0.444859689486181,1.07016331235885,2.09071047609954,0.793165398882963,0,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0.752875595388864,0.639933055772092,1.24930726552346,1.18388626022008,0.821127996921047,1.81446068902259,3.7441627409691,1.15859523106239,7.31420598941885,0.670700859703636,0.895037932904712,1.80719576192283,1.00267582127178,0.869079113764942,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,2.16115474571226,3.64295288292542,1.85392221392215,6.16640047943898,2.78607579678828,3.45690697349049,1.19245312152671,0.571994910780128,0.74291500265913,0.596287222100115,0.860234595106124,1.04142150482278,0,0.838998872419812,1.37559020970034,0.626984899610432,0.516833518338658,1.06729878806013,0.33472061276467,0.805658634218294,1.52054421143703,0.976248230192678,0.735326160691737,0.81014194788176,0.267899184852239,0.22452937262617,0,0,0,0.366403487860815,5.27121669744253,11.6334079244498,0.872188104285069,0.993943903390637,0.506522046658319,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0.98667019366864,0.933633106199299,0.538842688278752,0.326923806226917,0.454072282934794,1.15235184896,0.468642863667593,0,1.1409436430889,1.49448680551801,0.352303495931295,0.161872944368132,0.140450806702248,0.816616685019573,0.245668634623536,0.826606249406124,0,0.494533858557114,1.82032272387605,0,0,0.125118519871964,1.6623846929051,0.438977620880838,0.30648779579902,1.50238058906597,0.340296549480063,0.717558542755448,1.2813443329114,0.635795703478686,0.900273288253207,0.515262646192195,0.515281080091258,1.11670113798954,0.506328996723799,0.194874010322397,0,0.276149695926898,0.484938170456436,0.355009592516614,0.503760491138201,0.508681776931463,2.12586938479627,1.63647672354501,1.72082757233402,0,0,0,0.10366105501537,0.504641701751257,0.36497735907583,1.56449532329816,1.92972281457866,0,3.25057549622385,0,1.41968160047813,1.51726221070292,2.89213235860178,1.8749975364507,1.08939722046203,0.949082476444386,1.21348177344148,1.96221465125346,0.769494313892781,0,1.40241773803446,0.8231480226628,1.47008711385542,2.53510069643662,1.96565443335525,0.590789906681404,0.441463099414651,0.737930631258681,0.343135620597051,2.08525542276389,2.24803506515239,0.804231779293047,0.925884451585296,0.651616610620649,0,0,0.579652024875384,0.587043471179108,0.288732895522148,0,0.190254152234598,0,0,1.96973604869918,2.80805118167085,2.52672975890838,1.87467667973554,1.6798212819886,1.41775097242386,1.16426079513703,0.871901815541886,0.766765358330422,1.47798971368783,0.880484340132261,1.65862492432618,2.88239906833923,1.76739406796932,0.317489471460845,0.763976851116555,1.17217447210047,0,0.719792448923265,0.600686115687835,0.285826432630578,0.112131084345361,0,0.07333828582095,0.775630294546667,3.57656445851882,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0.266422179016099,1.00084595560703,2.71310802695722,0,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0.299918973546171,2.43247561282381,3.01354254859276,4.21667878966063,0.479249710983165,0,0,0.289562613335158,0.410952645100767,1.07436577943937,0.336255431980582,2.75843064282698,3.66566877261179,2.56686072559497,0.508189248444927,0,0.773288812777695,0,0,6.74106321552464,2.99161459204025,3.72973962092432,0.61345745859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| |||
|short_description=p6@KLF13 | |||
}} |
Revision as of 22:37, 11 January 2014
Short description: | p6@KLF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KLF13_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_ENST00000558921_5end |
EntrezGene: | KLF13 |
HGNC: | 13672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.91e-37 | 72 |
myeloid lineage restricted progenitor cell | 1.18e-32 | 66 |
granulocyte monocyte progenitor cell | 1.36e-32 | 67 |
macrophage dendritic cell progenitor | 5.06e-32 | 61 |
monopoietic cell | 2.05e-30 | 59 |
monocyte | 2.05e-30 | 59 |
monoblast | 2.05e-30 | 59 |
promonocyte | 2.05e-30 | 59 |
defensive cell | 2.29e-30 | 48 |
phagocyte | 2.29e-30 | 48 |
classical monocyte | 5.85e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.85e-27 | 42 |
myeloid cell | 2.29e-25 | 108 |
common myeloid progenitor | 2.29e-25 | 108 |
leukocyte | 7.39e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 6.89e-18 | 120 |
hematopoietic oligopotent progenitor cell | 1.58e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-15 | 161 |
nongranular leukocyte | 1.95e-15 | 115 |
hematopoietic stem cell | 2.10e-15 | 168 |
hematopoietic cell | 1.34e-13 | 177 |
granulocyte | 1.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.30e-31 | 98 |
blood island | 5.30e-31 | 98 |
bone marrow | 5.69e-28 | 76 |
hemolymphoid system | 1.63e-27 | 108 |
bone element | 1.18e-24 | 82 |
skeletal element | 3.50e-23 | 90 |
immune system | 5.38e-22 | 93 |
skeletal system | 7.27e-22 | 100 |
adult organism | 1.92e-15 | 114 |
lateral plate mesoderm | 1.68e-10 | 203 |
musculoskeletal system | 8.76e-08 | 167 |