FFCP PHASE1:Hg19::chr14:94849545..94849558,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5265 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8941 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=19bp_to_uc001ycw.3_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_8_at_SERPINA1_5end | |||
|id=chr14:94849545..94849558,- | |||
|ontology_enrichment_celltype=CL:0002057!3.83e-46!42;CL:0000860!6.58e-42!45;CL:0000766!3.00e-41!76;CL:0002194!1.32e-39!63;CL:0000576!1.32e-39!63;CL:0000040!1.32e-39!63;CL:0000559!1.32e-39!63;CL:0002009!8.50e-38!65;CL:0000839!9.75e-34!70;CL:0000557!5.37e-33!71;CL:0000763!4.76e-24!112;CL:0000049!4.76e-24!112;CL:0000738!7.25e-21!140;CL:0002087!1.18e-20!119;CL:0002031!2.47e-16!124;CL:0000037!7.39e-15!172;CL:0000566!7.39e-15!172;CL:0002032!3.51e-14!165;CL:0000837!3.51e-14!165;CL:0000988!6.64e-13!182;CL:0002393!3.69e-10!9;CL:0002397!3.69e-10!9;CL:0000181!6.04e-09!12;CL:0000417!6.04e-09!12;CL:0000668!6.04e-09!12;CL:0000414!6.04e-09!12;CL:0000412!6.04e-09!12;CL:0000182!6.04e-09!12;CL:0000094!3.76e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.23e-56;33!CL:0002057;4.23e-56;33!CL:0000473;3.56e-48;39!CL:0000234;3.56e-48;39!CL:0000576;2.04e-40;48!CL:0000766;4.08e-32;69!CL:0000763;5.52e-14;100!CL:0000094;2.01e-11;8!CL:0002393;2.85e-11;6!CL:0002397;2.85e-11;6!CL:0002087;6.14e-10;104!CL:0000182;1.27e-08;12!CL:0000738;3.96e-08;136!CL:0000081;5.46e-08;11!CL:0000775;1.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.92e-79,48;CL:0000234,8.92e-79,48;CL:0000860,8.59e-77,42;CL:0002057,8.59e-77,42;CL:0000766,1.11e-64,72;CL:0002194,3.97e-60,59;CL:0000576,3.97e-60,59;CL:0000040,3.97e-60,59;CL:0000559,3.97e-60,59;CL:0002009,1.00e-57,61;CL:0000839,2.38e-52,66;CL:0000557,2.27e-51,67;CL:0000763,4.58e-38,108;CL:0000049,4.58e-38,108;CL:0000738,1.26e-32,136;CL:0002087,5.32e-30,115;CL:0002031,3.20e-24,120;CL:0000037,2.10e-23,168;CL:0002032,8.41e-22,161;CL:0000837,8.41e-22,161;CL:0000988,2.00e-21,177;CL:0002393,5.30e-16,9;CL:0002397,5.30e-16,9;CL:0000094,2.72e-11,8;CL:0000182,1.29e-08,12;CL:0000134,5.61e-08,354;CL:0000081,6.73e-08,11;CL:0002320,1.56e-07,361;CL:0000775,1.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-54;42!CL:0000049;2.74e-12;108!UBERON:0004161;3.40e-09;11!UBERON:0009497;1.41e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.28e-36!102;UBERON:0003061!5.28e-36!102;UBERON:0002193!6.69e-33!112;UBERON:0002405!2.69e-32!115;UBERON:0002371!3.46e-27!80;UBERON:0001474!5.71e-25!86;UBERON:0004765!1.89e-19!101;UBERON:0001434!1.89e-19!101;UBERON:0007023!6.43e-11!115;UBERON:0003081!4.01e-10!216;UBERON:0000178!4.51e-09!15;UBERON:0000179!4.51e-09!15;UBERON:0000463!4.51e-09!15;UBERON:0009497!7.35e-09!25;UBERON:0000015!7.35e-09!25;UBERON:0002423!7.35e-09!25;UBERON:0006235!7.35e-09!25;UBERON:0004161!7.35e-09!25;UBERON:0009854!1.29e-08!23;UBERON:0000062!2.82e-08!511;UBERON:0008835!4.54e-08!22;UBERON:0003894!4.54e-08!22;UBERON:0005057!6.44e-08!26;UBERON:0002107!2.43e-07!19;UBERON:0006925!2.43e-07!19;UBERON:0008836!2.43e-07!19;UBERON:0009856!4.11e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-10;15!UBERON:0000179;1.06e-10;15!UBERON:0000463;1.06e-10;15!UBERON:0002423;1.73e-08;25!UBERON:0002107;2.48e-08;19!UBERON:0006925;2.48e-08;19!UBERON:0002108;9.17e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.30e-49,98;UBERON:0003061,4.30e-49,98;UBERON:0002193,7.23e-45,108;UBERON:0002371,1.04e-43,76;UBERON:0001474,1.55e-39,82;UBERON:0002405,5.85e-35,93;UBERON:0004765,7.74e-35,90;UBERON:0001434,4.98e-30,100;UBERON:0003081,1.96e-17,203;UBERON:0002204,8.74e-14,167;UBERON:0000178,1.09e-10,15;UBERON:0000179,1.09e-10,15;UBERON:0000463,1.09e-10,15;UBERON:0009497,1.84e-08,25;UBERON:0000015,1.84e-08,25;UBERON:0002423,1.84e-08,25;UBERON:0006235,1.84e-08,25;UBERON:0004161,1.84e-08,25;UBERON:0002107,2.51e-08,19;UBERON:0006925,2.51e-08,19;UBERON:0008836,2.51e-08,19;UBERON:0008835,2.66e-08,22;UBERON:0003894,2.66e-08,22;UBERON:0009854,7.72e-08,23;UBERON:0000926,1.09e-07,315;UBERON:0004120,1.09e-07,315;UBERON:0006603,1.09e-07,315;UBERON:0007499,5.00e-07,25;UBERON:0002384,6.23e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.18009283054671,2.68680578668049,2.16742572642506,0,0,0,0,0,0,1.10799081706375,6.01633342410425,1.95309783644267,0.223915474239924,0.32389366601898,0.257575567634187,8.14230137165562,8.31327076115381,7.27752183563449,6.50801303335917,7.40102198439286,5.88442104700697,8.34307937734236,5.37937483711111,4.7296445977717,4.82643953031266,1.93645405075148,2.70852973188684,7.71793592124679,6.27684145133045,2.9214052977861,10.1007684482398,4.17207735198922,7.03270838378945,3.95821560224059,9.97318288108159,6.39337125799041,12.1887880224005,11.3477044938228,14.3249117268982,5.7787193009051,8.34372669472322,6.29847649644838,15.1349875658342,4.05105399586321,4.74693581161327,6.33765858935825,5.95292039902122,2.09658645508376,5.16711703273877,2.4028302854641,3.53596290733576,1.99508920618874,4.77400025277816,4.20127553658658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,1.5905718941022,1.45990461090791,0,0,0,1.83370705696798,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,321.95778844745,715.498213741312,321.980499141365,0,8.36321382093172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.936017060556951,3.12125440806329,0,0,0,0,0.290633938513962,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,8.23907726341901,32.9077605124427,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,4.74571241800957,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29632954224082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,52.3448339170429,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,65.4299415398615,0,0,0,0,0.507447609232169,0.764637207142375,9.68400218196076,1.19115887728894,3.70226045777575,3.24236655596359,1.62009431171434,4.75875105776562,0,0,0,0,0,0,0,0.199579371432817,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,6.59215496907038,0,0,0.276283915531148,0,0,0,0,0.449341755736634,0,0,0.0986434056369336,2.3948309234694,0,6.78532922266653,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3209787098083,0,0.848118428603645,0,0,1.41532103205343,1.83309043480088,0,0,0,0,0,0,0,0,0.242780379534093,3.15667522279512,2.41981432097328,0,0.568679216656392,0,0,0,0.330991955875499,0,0,0,0,0.347119476670262,0.0979923974143777,0,1.57254001417827,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0.320635281006135,3.20179492109029,0.39961921916426,0,0,19.0470447626781,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,2.32991899054908,33.7979852097989,48.04844543622,40.6443369440735,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,10.4023533634942,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,302.923467012596,453.173560079797,0.129282956361551,0.26446520348538,0,0,2.88326013932776,0.157204305099666,8.28478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.554645257684261,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,2.20114318226015,0,0,0,0,0,0,2.34454203369928,0,0,1.33070477595341,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0.342976018874837,0,0.0657727735628491,0.472775363535873,0,0,0,0,1.82631744101899,0.431855182437243,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,4.23387050190929,0,0.31020638566432,0,0,0.098150233615243,0.243835849964539,0,0,0,0.485710993059139,0,0,0,0,0,0,5.40219106755613,18.1404435218285,0,0,0,0,0,0,0,0.563903507879121,0.902410431630081,0,0,1.76447435857846,0.401206833445841,0,0,0.143339583151451,0,0.135982980381829,0,4.2322147241232,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0.129177819672012,0.124149428591716,0,0,0.202117188958219,0,0,0.0673520530145875,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p8@SERPINA1 | |||
}} |
Revision as of 21:43, 11 January 2014
Short description: | p8@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 19bp_to_uc001ycw.3_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.92e-79 | 48 |
phagocyte | 8.92e-79 | 48 |
classical monocyte | 8.59e-77 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.59e-77 | 42 |
myeloid leukocyte | 1.11e-64 | 72 |
monopoietic cell | 3.97e-60 | 59 |
monocyte | 3.97e-60 | 59 |
monoblast | 3.97e-60 | 59 |
promonocyte | 3.97e-60 | 59 |
macrophage dendritic cell progenitor | 1.00e-57 | 61 |
myeloid lineage restricted progenitor cell | 2.38e-52 | 66 |
granulocyte monocyte progenitor cell | 2.27e-51 | 67 |
myeloid cell | 4.58e-38 | 108 |
common myeloid progenitor | 4.58e-38 | 108 |
leukocyte | 1.26e-32 | 136 |
nongranular leukocyte | 5.32e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 3.20e-24 | 120 |
hematopoietic stem cell | 2.10e-23 | 168 |
hematopoietic oligopotent progenitor cell | 8.41e-22 | 161 |
hematopoietic multipotent progenitor cell | 8.41e-22 | 161 |
hematopoietic cell | 2.00e-21 | 177 |
intermediate monocyte | 5.30e-16 | 9 |
CD14-positive, CD16-positive monocyte | 5.30e-16 | 9 |
granulocyte | 2.72e-11 | 8 |
hepatocyte | 1.29e-08 | 12 |
mesenchymal cell | 5.61e-08 | 354 |
blood cell | 6.73e-08 | 11 |
connective tissue cell | 1.56e-07 | 361 |
neutrophil | 1.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.30e-49 | 98 |
blood island | 4.30e-49 | 98 |
hemolymphoid system | 7.23e-45 | 108 |
bone marrow | 1.04e-43 | 76 |
bone element | 1.55e-39 | 82 |
immune system | 5.85e-35 | 93 |
skeletal element | 7.74e-35 | 90 |
skeletal system | 4.98e-30 | 100 |
lateral plate mesoderm | 1.96e-17 | 203 |
musculoskeletal system | 8.74e-14 | 167 |
blood | 1.09e-10 | 15 |
haemolymphatic fluid | 1.09e-10 | 15 |
organism substance | 1.09e-10 | 15 |
epithelium of foregut-midgut junction | 1.84e-08 | 25 |
anatomical boundary | 1.84e-08 | 25 |
hepatobiliary system | 1.84e-08 | 25 |
foregut-midgut junction | 1.84e-08 | 25 |
septum transversum | 1.84e-08 | 25 |
liver | 2.51e-08 | 19 |
digestive gland | 2.51e-08 | 19 |
liver bud | 2.51e-08 | 19 |
hepatic diverticulum | 2.66e-08 | 22 |
liver primordium | 2.66e-08 | 22 |
digestive tract diverticulum | 7.72e-08 | 23 |
mesoderm | 1.09e-07 | 315 |
mesoderm-derived structure | 1.09e-07 | 315 |
presumptive mesoderm | 1.09e-07 | 315 |
epithelial sac | 5.00e-07 | 25 |
connective tissue | 6.23e-07 | 371 |