FFCP PHASE1:Hg19::chr14:81790540..81790556,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1158 | |||
|description=CAGE_peak_at_chr14:81790540..81790556,- | |||
|id=chr14:81790540..81790556,- | |||
|ontology_enrichment_celltype=CL:0000066!6.65e-28!254;CL:0002076!1.36e-21!43;CL:0000223!8.20e-16!59;CL:0002251!1.66e-12!21;CL:0002368!6.19e-10!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.59e-22;42!CL:0002251;1.40e-15;20!CL:0002368;2.89e-14;13!CL:0000622;3.81e-09;5!CL:0002159;1.19e-08;14!CL:0002202;1.75e-08;9!CL:0002632;1.75e-08;9!CL:0000154;1.74e-07;6!CL:0000244;1.80e-07;4!CL:0000731;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.27e-29,42;CL:0000066,1.59e-22,253;CL:0000223,3.22e-21,58;CL:0002251,1.30e-15,20;CL:0002368,3.28e-14,13;CL:0000622,3.89e-09,5;CL:0002159,1.27e-08,14;CL:0002202,1.90e-08,9;CL:0002632,1.90e-08,9;CL:0000154,1.76e-07,6;CL:0000244,1.94e-07,4;CL:0000731,1.94e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;9.97e-11;58 | |||
|ontology_enrichment_disease=DOID:305!1.32e-17!106;DOID:1749!2.72e-11!14;DOID:0050687!1.70e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.64e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.36e-12,14;DOID:305,4.76e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.49e-21!129;UBERON:0007811!1.49e-21!129;UBERON:0000033!9.62e-21!123;UBERON:0004121!2.03e-19!169;UBERON:0000064!5.76e-19!219;UBERON:0000924!3.14e-18!173;UBERON:0006601!3.14e-18!173;UBERON:0004119!1.32e-17!169;UBERON:0000925!1.32e-17!169;UBERON:0006595!1.32e-17!169;UBERON:0001004!2.06e-16!72;UBERON:0000062!1.05e-15!511;UBERON:0003056!1.28e-14!61;UBERON:0003075!1.43e-14!86;UBERON:0007284!1.43e-14!86;UBERON:0001007!5.26e-14!155;UBERON:0001555!5.26e-14!155;UBERON:0007026!5.26e-14!155;UBERON:0005743!9.00e-14!86;UBERON:0002346!4.33e-13!90;UBERON:0000481!6.92e-13!347;UBERON:0001049!7.55e-13!57;UBERON:0005068!7.55e-13!57;UBERON:0006241!7.55e-13!57;UBERON:0007135!7.55e-13!57;UBERON:0000922!8.85e-13!612;UBERON:0000073!1.44e-12!94;UBERON:0001016!1.44e-12!94;UBERON:0000065!2.89e-12!53;UBERON:0000063!2.93e-12!97;UBERON:0001017!4.30e-12!82;UBERON:0007023!5.54e-12!115;UBERON:0004921!2.10e-11!129;UBERON:0004185!2.10e-11!129;UBERON:0002780!2.39e-11!41;UBERON:0001890!2.39e-11!41;UBERON:0006240!2.39e-11!41;UBERON:0002616!3.22e-11!59;UBERON:0002050!6.48e-11!605;UBERON:0005423!6.48e-11!605;UBERON:0003080!7.92e-11!42;UBERON:0000955!1.33e-10!69;UBERON:0006238!1.33e-10!69;UBERON:0000923!1.47e-10!604;UBERON:0005291!1.47e-10!604;UBERON:0006598!1.47e-10!604;UBERON:0002532!1.47e-10!604;UBERON:0000467!1.48e-10!625;UBERON:0000077!1.64e-10!130;UBERON:0000468!1.77e-10!659;UBERON:0000480!1.96e-10!626;UBERON:0002020!3.18e-10!34;UBERON:0003528!3.18e-10!34;UBERON:0001893!5.32e-10!34;UBERON:0002791!9.26e-10!33;UBERON:0008947!1.75e-09!38;UBERON:0003258!1.75e-09!38;UBERON:0001869!2.38e-09!32;UBERON:0000475!3.01e-09!365;UBERON:0001444!6.32e-09!48;UBERON:0000072!1.00e-08!46;UBERON:0000161!1.19e-08!35;UBERON:0001041!9.51e-08!98;UBERON:0001032!1.38e-07!24;UBERON:0004456!1.38e-07!24;UBERON:0000464!1.70e-07!104;UBERON:0000956!2.40e-07!25;UBERON:0000203!2.40e-07!25;UBERON:0000166!2.69e-07!21;UBERON:0000477!4.67e-07!286;UBERON:0000020!5.30e-07!23;UBERON:0005178!7.40e-07!34;UBERON:0002224!7.40e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;2.27e-09;14!UBERON:0000365;1.06e-08;5!UBERON:0000161;1.72e-08;19!UBERON:0000166;1.72e-08;19!UBERON:0000486;2.90e-08;12!UBERON:0000033;1.15e-07;50!UBERON:0010371;1.17e-07;31!UBERON:0001032;2.76e-07;24!UBERON:0004456;2.76e-07;24!UBERON:0002104;2.80e-07;21!UBERON:0007811;3.42e-07;52!UBERON:0000165;3.64e-07;28!UBERON:0005910;3.98e-07;6!UBERON:0001444;4.40e-07;48!UBERON:0000153;4.76e-07;54!UBERON:0007196;6.02e-07;15!UBERON:0001558;6.02e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000033,1.59e-15,56;UBERON:0000153,2.55e-14,62;UBERON:0007811,2.55e-14,62;UBERON:0004119,3.08e-13,160;UBERON:0000925,3.08e-13,160;UBERON:0006595,3.08e-13,160;UBERON:0001444,7.58e-12,49;UBERON:0010371,4.28e-11,104;UBERON:0001004,7.36e-11,74;UBERON:0004121,2.98e-10,171;UBERON:0000924,2.98e-10,171;UBERON:0006601,2.98e-10,171;UBERON:0001007,1.81e-09,145;UBERON:0001555,1.81e-09,145;UBERON:0007026,1.81e-09,145;UBERON:0000161,9.90e-09,36;UBERON:0000365,1.09e-08,5;UBERON:0003056,1.49e-08,61;UBERON:0000166,2.28e-08,22;UBERON:0011216,4.48e-08,223;UBERON:0005423,5.10e-08,581;UBERON:0002050,8.02e-08,564;UBERON:0000922,9.08e-08,592;UBERON:0000020,2.39e-07,24;UBERON:0001032,2.39e-07,24;UBERON:0004456,2.39e-07,24;UBERON:0000970,2.45e-07,21;UBERON:0002104,2.45e-07,21;UBERON:0005085,3.09e-07,31;UBERON:0005910,4.07e-07,6;UBERON:0003075,4.38e-07,82;UBERON:0007284,4.38e-07,82;UBERON:0007196,6.67e-07,15;UBERON:0001558,6.67e-07,15;UBERON:0000165,8.45e-07,29;UBERON:0000930,8.45e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.218441372130172,1.58260186937072,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.85870796139317,1.09499540058307,1.38096903554283,0,0,0,0,0,0,8.27479102031034,5.4217065380085,5.9160641626686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.76662384700814,2.66075276955077,2.63504357079378,0.589405839739707,4.37154345951051,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,5.23312862571041,0,0,0,0,0,0,0,0,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.58673763786,20.7287051649034,14.3402297694502,0.121973706129595,0.265059536642971,0.232387885739037,0.829288440122964,0.504641701751257,1.09493207722749,0,0,0,0,0,0.591534000199219,0.337169380156203,0.482022059766964,0.55146986366197,0.435758888184812,0.237270619111097,0.404493924480493,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,2.05881372358231,12.6212828219919,0,6.23279628952111,20.9249886058277,0,0,0,3.59384255422738,0.70445216541493,0,0,0,0,0,0,0,0,14.0600750980165,17.6381234608803,13.0433089462996,3.76145795351963,3.48760726216754,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0,6.09835246210548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,13.6344399806234,4.32780647998713,0,0,0,0,1.23224539367064,0.784349769176855,0,2.63879072232189,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,1.28225062558195,1.64007322849853,0.976135183992909,0,0,0,10.3367796839311,9.1008434445113,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,13.3880781442392,18.06586633232,19.2695195866822,6.069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44688155260931,9.38423185750102,5.44454924306613,0,9.90162357143829,3.36942951335251,12.4160442990269,25.4992974229725,0,0,0,0,0,0,0,0,0,0,6.61608583148786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,1.48482340416319,0.614321404198464,1.9882952955326,3.37606599385231,0,0,3.58913193817589,0.597743964753209,0.276283915531148,0.755798243562828,0,0,0,0.0898683511473268,1.43216939740487,0,2.17015492401254,0,0,0,1.29875337426592,1.99613798001194,0.520855522170466,0,0,4.21035758656349,3.0510438035132,0.472775363535873,0,0.291604613383254,0.173624994933292,0,3.25610384288601,0,0,0,1.53569778007781,0.21787692703798,18.8222054776114,1.76985594558733,0,0,0.269272933229316,0.434589487688032,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0,0.489698424477443,0.424059214301822,0.432777279484182,0,1.41532103205343,1.83309043480088,0,0,0,1.81983059047828,0,1.63985112007737,0,2.93496928398135,0,0,2.41981432097328,0.30607276163049,0.189559738885464,0.300646838828985,0.414752765588989,0,0,0,0,1.42304773014896,0,1.21491816834592,7.93738419056459,5.48473001456536,0.52418000472609,0,1.06431964417994,0.950161122120412,0.985385484638511,5.23740689037465,0,2.71176888936639,0.548167698587004,0,1.01297273529406,2.93327074102205,0.400794101257669,1.92107695265417,1.39866726707491,3.74635084600676,0,0,0.720273989940749,0,3.77110455386873,0,0,0,0.288950589901519,0.600420288709789,1.77976992559591,0,0,0,0,0,0,0.798716001995964,0,0,0.0671834724867263,0,0,0,0,0,0.688992370603241,0.254019996197353,0,1.77064427945048,0.160753148465019,0.412618309791701,0.415440338029185,0.449947783103001,1.5476039091159,0.91124334987037,7.37956312718385,0.394028536495991,3.09482069996489,0.422401346077626,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,1.45455861916959,0.171086837884329,1.40963004463334,0.533937062838473,0.314408610199332,1.24271716604159,0,0,0,6.38341257770182,0,0,0,0,2.82697373250422,0,0.732157589411779,1.001527445652,0.573409195690071,0.998361463831671,1.1177352529449,0,0.37494122388632,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0.926404341482917,0.219284049578707,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0.245772908753719,1.05656061679314,0,0,0,0,0,3.35710818526667,3.73246356019784,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,0,0.638535436228605,0.82046545696302,0,0.829887029570615,1.45328081068666,2.85538840518309,3.63146558453795,5.5445769973438,15.408002275821,0.924205329202706,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0.295712172434091,0.405225507710368,0,0.620060389503552,0.760989722326882,0.546974809018219,0,1.98484471355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| |||
|short_description=p@chr14:81790540..81790556,- | |||
}} |
Revision as of 21:19, 11 January 2014
Short description: | p@chr14:81790540..81790556, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:81790540..81790556, - |
Coexpression cluster: | C1158_Small_malignant_Gingival_Keratinocyte_cervical_Mallassezderived_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.27e-29 | 42 |
epithelial cell | 1.59e-22 | 253 |
endodermal cell | 3.22e-21 | 58 |
epithelial cell of alimentary canal | 1.30e-15 | 20 |
respiratory epithelial cell | 3.28e-14 | 13 |
acinar cell | 3.89e-09 | 5 |
general ecto-epithelial cell | 1.27e-08 | 14 |
epithelial cell of tracheobronchial tree | 1.90e-08 | 9 |
epithelial cell of lower respiratory tract | 1.90e-08 | 9 |
protein secreting cell | 1.76e-07 | 6 |
transitional epithelial cell | 1.94e-07 | 4 |
urothelial cell | 1.94e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
head | 1.59e-15 | 56 |
anterior region of body | 2.55e-14 | 62 |
craniocervical region | 2.55e-14 | 62 |
endoderm-derived structure | 3.08e-13 | 160 |
endoderm | 3.08e-13 | 160 |
presumptive endoderm | 3.08e-13 | 160 |
subdivision of head | 7.58e-12 | 49 |
ecto-epithelium | 4.28e-11 | 104 |
respiratory system | 7.36e-11 | 74 |
ectoderm-derived structure | 2.98e-10 | 171 |
ectoderm | 2.98e-10 | 171 |
presumptive ectoderm | 2.98e-10 | 171 |
digestive system | 1.81e-09 | 145 |
digestive tract | 1.81e-09 | 145 |
primitive gut | 1.81e-09 | 145 |
orifice | 9.90e-09 | 36 |
urothelium | 1.09e-08 | 5 |
pre-chordal neural plate | 1.49e-08 | 61 |
oral opening | 2.28e-08 | 22 |
organ system subdivision | 4.48e-08 | 223 |
developing anatomical structure | 5.10e-08 | 581 |
embryonic structure | 8.02e-08 | 564 |
embryo | 9.08e-08 | 592 |
sense organ | 2.39e-07 | 24 |
sensory system | 2.39e-07 | 24 |
entire sense organ system | 2.39e-07 | 24 |
eye | 2.45e-07 | 21 |
visual system | 2.45e-07 | 21 |
ectodermal placode | 3.09e-07 | 31 |
transitional epithelium | 4.07e-07 | 6 |
neural plate | 4.38e-07 | 82 |
presumptive neural plate | 4.38e-07 | 82 |
tracheobronchial tree | 6.67e-07 | 15 |
lower respiratory tract | 6.67e-07 | 15 |
mouth | 8.45e-07 | 29 |
stomodeum | 8.45e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.36e-12 | 14 |
carcinoma | 4.76e-08 | 106 |