FFCP PHASE1:Hg19::chr14:61748435..61748448,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161291 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27254 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENST00000554497_5end | |||
|description=CAGE_peak_17_at_TMEM30B_5end | |||
|id=chr14:61748435..61748448,- | |||
|ontology_enrichment_celltype=CL:0002617!7.93e-15!2;CL:0002602!3.09e-14!2;CL:0000153!1.87e-12!9;CL:0000447!1.87e-12!9;CL:0000667!8.17e-11!6;CL:0000058!8.17e-11!6;CL:0000138!8.17e-11!6;CL:0000327!4.80e-08!14;CL:0000136!1.87e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000153;7.17e-23;9!CL:0000447;7.17e-23;9!CL:0000214;9.46e-18;3!CL:0000327;3.36e-14;15!CL:0000138;1.57e-09;6!CL:0000499;4.21e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,7.17e-23,9;CL:0000447,7.17e-23,9;CL:0000214,9.46e-18,3;CL:0000327,3.36e-14,15;CL:0000058,1.57e-09,6;CL:0000138,1.57e-09,6;CL:0000499,4.21e-08,28 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.88e-50;1 | |||
|ontology_enrichment_disease=DOID:6193!1.77e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.88e-50;1!DOID:3350;4.90e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.42e-50,1;DOID:3350,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0002360!3.70e-15!2;UBERON:0000094!3.70e-15!2;UBERON:0007645!3.70e-15!2;UBERON:0000007!1.20e-14!2;UBERON:0009568!3.09e-14!2;UBERON:0002216!3.09e-14!2;UBERON:0002209!3.09e-14!2;UBERON:0002213!3.09e-14!2;UBERON:0004267!3.09e-14!2;UBERON:0006444!3.09e-14!2;UBERON:0001995!3.09e-14!2;UBERON:0004715!3.09e-14!2;UBERON:0001468!3.09e-14!2;UBERON:0001130!3.09e-14!2;UBERON:0001066!3.09e-14!2;UBERON:0003127!3.78e-14!2;UBERON:0004905!8.67e-13!5;UBERON:0000982!8.67e-13!5;UBERON:0004770!8.67e-13!5;UBERON:0005174!1.19e-12!5;UBERON:0001137!1.19e-12!5;UBERON:0002418!8.58e-10!3;UBERON:0004755!8.58e-10!3;UBERON:0002363!1.65e-08!1;UBERON:0007647!1.65e-08!1;UBERON:0010115!1.65e-08!1;UBERON:0007029!2.90e-08!1;UBERON:0007190!6.63e-08!1;UBERON:0003296!9.32e-08!4;UBERON:0010133!9.32e-08!4;UBERON:0007023!2.84e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.88e-50;1!UBERON:0002360;4.90e-26;2!UBERON:0000094;4.90e-26;2!UBERON:0010743;4.90e-26;2!UBERON:0006915;9.46e-18;3!UBERON:0007616;9.46e-18;3!UBERON:0002217;9.46e-18;3!UBERON:0002018;9.46e-18;3!UBERON:0004905;1.69e-07;8!UBERON:0000982;1.69e-07;8!UBERON:0004770;1.69e-07;8!UBERON:0004457;8.37e-07;9!UBERON:0000042;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.46e-50,1;UBERON:0007645,1.46e-50,1;UBERON:0007647,1.46e-50,1;UBERON:0010115,1.46e-50,1;UBERON:0002360,4.32e-26,2;UBERON:0000094,4.32e-26,2;UBERON:0010743,4.32e-26,2;UBERON:0006915,9.46e-18,3;UBERON:0007616,9.46e-18,3;UBERON:0002217,9.46e-18,3;UBERON:0002018,9.46e-18,3;UBERON:0004905,1.69e-07,8;UBERON:0000982,1.69e-07,8;UBERON:0004770,1.69e-07,8 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,1.45990461090791,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2444861091645,0,0,0,0,0,0,0,0,0,0,0,0,5.1595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@TMEM30B | |||
}} |
Revision as of 20:25, 11 January 2014
Short description: | p17@TMEM30B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TMEM30B_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000554497_5end |
EntrezGene: | TMEM30B |
HGNC: | 27254 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 7.17e-23 | 9 |
carbohydrate secreting cell | 7.17e-23 | 9 |
synovial cell | 9.46e-18 | 3 |
extracellular matrix secreting cell | 3.36e-14 | 15 |
chondroblast | 1.57e-09 | 6 |
chondrocyte | 1.57e-09 | 6 |
stromal cell | 4.21e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.46e-50 | 1 |
future meninx | 1.46e-50 | 1 |
ectomeninx | 1.46e-50 | 1 |
future dura mater | 1.46e-50 | 1 |
meninx | 4.32e-26 | 2 |
membrane organ | 4.32e-26 | 2 |
meningeal cluster | 4.32e-26 | 2 |
stratified squamous epithelium | 9.46e-18 | 3 |
layer of synovial tissue | 9.46e-18 | 3 |
synovial joint | 9.46e-18 | 3 |
synovial membrane of synovial joint | 9.46e-18 | 3 |
articulation | 1.69e-07 | 8 |
skeletal joint | 1.69e-07 | 8 |
articular system | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.42e-50 | 1 |
mesenchymal cell neoplasm | 5.56e-26 | 2 |