FFCP PHASE1:Hg19::chr14:55609308..55609363,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1200 | |||
|description=CAGE_peak_at_chr14:55609308..55609363,+ | |||
|id=chr14:55609308..55609363,+ | |||
|ontology_enrichment_celltype=CL:0000860!8.83e-20!45;CL:0000839!2.64e-19!70;CL:0002057!3.34e-19!42;CL:0002194!2.81e-18!63;CL:0000576!2.81e-18!63;CL:0000040!2.81e-18!63;CL:0000559!2.81e-18!63;CL:0002009!1.08e-16!65;CL:0000557!1.21e-16!71;CL:0000766!4.18e-14!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-25;33!CL:0002057;1.13e-25;33!CL:0000473;5.23e-25;39!CL:0000234;5.23e-25;39!CL:0000576;6.83e-14;48!CL:0000766;1.32e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.36e-29,48;CL:0000234,7.36e-29,48;CL:0000839,3.48e-27,66;CL:0002194,2.27e-25,59;CL:0000576,2.27e-25,59;CL:0000040,2.27e-25,59;CL:0000559,2.27e-25,59;CL:0000557,1.62e-24,67;CL:0000860,3.88e-24,42;CL:0002057,3.88e-24,42;CL:0002009,6.96e-24,61;CL:0000766,4.06e-22,72;CL:0000763,1.80e-09,108;CL:0000049,1.80e-09,108;CL:0002031,9.68e-09,120;CL:0002087,2.18e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.38e-16!80;UBERON:0002204!6.49e-16!167;UBERON:0001474!7.78e-16!86;UBERON:0004765!2.79e-15!101;UBERON:0001434!2.79e-15!101;UBERON:0000926!8.07e-13!448;UBERON:0004120!8.07e-13!448;UBERON:0006603!8.07e-13!448;UBERON:0002390!1.18e-12!102;UBERON:0003061!1.18e-12!102;UBERON:0002193!1.38e-11!112;UBERON:0000480!1.62e-11!626;UBERON:0000467!2.98e-11!625;UBERON:0000468!1.33e-10!659;UBERON:0000062!4.75e-09!511;UBERON:0003081!1.56e-08!216;UBERON:0000923!3.04e-07!604;UBERON:0005291!3.04e-07!604;UBERON:0006598!3.04e-07!604;UBERON:0002532!3.04e-07!604;UBERON:0002405!3.67e-07!115;UBERON:0002050!4.62e-07!605;UBERON:0005423!4.62e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.98e-25,76;UBERON:0001474,6.17e-24,82;UBERON:0004765,2.19e-21,90;UBERON:0002390,4.31e-20,98;UBERON:0003061,4.31e-20,98;UBERON:0001434,8.98e-20,100;UBERON:0002204,3.95e-18,167;UBERON:0002405,2.43e-17,93;UBERON:0002193,4.32e-16,108;UBERON:0003081,2.73e-12,203;UBERON:0000926,4.76e-12,315;UBERON:0004120,4.76e-12,315;UBERON:0006603,4.76e-12,315 | |||
|phase1_expression=1.09007027562334,3.63970890614671,0.422863212287913,0,1.34088328328186,1.74467704820074,2.53299878168311,0.631719873426831,1.04474251279935,0.245733936501509,1.39560233594486,1.74753097704138,2.37390280405608,0.495065411840187,1.65698687863958,4.03395087871065,1.20538905604795,2.19093027116212,0,0.246242116153576,0.612002073732759,2.19418305034661,0.286235987131057,1.23186982565596,0.753255837568817,0.0764134057479513,0,0.0787107813136792,0,0,1.08371286321253,1.83884244895785,1.50602959389125,1.47901604066715,0,0,0,0,1.40381113229099,0.434021741431704,1.79132379391939,2.26725566213286,0.77272670290256,11.6318591023652,10.9584023669755,9.70336244751265,13.4808841405297,12.7462045286766,19.5115013663915,6.90461741573161,7.17249978281482,9.69577142543199,7.23965929546899,9.68227025375739,6.77132432971709,14.8711448238658,16.3743690034707,19.3262196622773,17.4467818651414,8.98601275813062,10.8687311385837,7.91643120448119,9.57425556583833,4.68847225585964,14.5104619314292,9.64554881974938,10.5879782329248,9.54744927975624,8.86520961314342,8.90474263290978,12.7133895553007,8.47038562771399,18.0383560841304,2.74631872205524,2.97646019951061,0.628975936525128,3.25753030324836,1.20141514273205,0.32145117339416,0.570025487482497,2.58591680358817,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.83593247695339,0,0,0,0.779873198196215,1.17842362989935,0.664601683750863,0.270803863765016,2.68991771423918,1.1705341280389,0.164437904603676,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,4.87613732627923,1.34140171940727,0.255725123687061,1.80719576192283,0.50133791063589,1.73815822752988,0.795285947051099,0.486634870302636,0.567208902984407,0.443458794925128,0.087834785693126,0.196468613246569,0.364295288292542,1.11235332835329,2.27183175558278,2.08955684759121,5.58423434179234,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0,0.66944122552934,0.805658634218294,0.760272105718513,0.732186172644509,0.735326160691737,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,1.98788780678127,0.759783069987479,0.662045904066094,1.14734648299525,2.12801029319014,1.12135520028461,1.06748995729705,1.48000529050296,0.933633106199299,1.0776853765575,0.980771418680752,0.454072282934794,4.03323147135999,0.234321431833797,2.18512053781224,0,3.13842229158782,0.587172493218824,0.809364721840658,0.561803226808994,0.61246251376468,1.35117749042945,1.85986406116378,1.18800285728205,2.22540236350701,0.910161361938026,0.718618141816238,0,0.375355559615893,0.277064115484183,0.877955241761676,3.37136575378922,0.300476117813194,0.113432183160021,0.538168907066586,0.427114777637135,1.69545520927649,1.20036438433761,3.09157587715317,0.772921620136887,0.744467425326359,0.168776332241266,1.46155507741798,2.27190396819703,0.920498986422993,2.10139873864455,0.710019185033229,1.20902517873168,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,1.92972281457866,0,0.928735856063958,3.60939740834793,2.9576700009961,1.34867752062481,1.44606617930089,2.97793726377464,1.74303555273925,1.18635309555548,1.07865046528132,1.17732879075208,1.53898862778556,0,0,0,0,0,0,0,0,1.47586126251736,0.343135620597051,0.548751427043128,0,0.603173834469785,0.648119116109707,1.3032332212413,1.03993478527958,0,0.115930404975077,0.234817388471643,0.577465791044295,0.462985512576611,0.951270761172991,0,0.858486162094873,3.44703808522356,2.80805118167085,2.97262324577457,0.93733833986777,0.503946384596579,0.708875486211932,0.626909658919938,0,0,0,1.93706554829097,2.28060927094849,3.17063897517315,2.01987893482208,2.09543051164158,3.81988425558278,8.20522130470329,17.1072446022705,6.88944201112268,7.50857644609794,3.42991719156694,0.448524337381443,0.87192013766656,0.2933531432838,0.129271715757778,3.57656445851882,1.690605505112,0.797814349754612,1.04007436911366,0,0,1.3321108950805,0,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.099972991182057,12.162378064119,16.5744840172602,40.058448501776,0.239624855491583,0,1.42636905040718,0.723906533337896,1.84928690295345,0.358121926479791,1.12085143993527,0,0.646882724578552,0,1.27047312111232,0,4.63973287666617,1.00509759200609,3.82763250991898,0,0,0,0.49076596687656,1.50051156317903,0.542530047399471,1.45579603071565,6.0665856191035,2.20783381047509,1.52283839490527,2.10662269809403,9.09630016223939,4.1389228517002,0,0.368738337083406,1.30325421702124,1.17480694477644,1.71571711905428,0.206768026122887,1.50999940573032,0.426910231213777,1.21251028578504,0,2.41912234663744,0.248107807818777,0,0.841980283299221,0.896974044789907,0,0.965123526861645,0,1.07946785661859,2.30830242907065,0.574890092096664,1.55776328755086,3.1376802184189,2.05461064305758,0.802025881213139,0.828728900423067,0.34444334449382,2.36718518408732,3.40923478894503,0,0.231046011313244,0,0,0.316654886678627,1.13733384070897,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0.447749509444357,1.75407901316748,1.0457418040996,0,0.328014645699706,0,0.515205058238611,0.0915694648183434,0.082509499920588,0,2.60024098414608,0,0.193341436584244,1.84858340537573,1.68854042198743,0.275673144969061,0.537101224341368,2.32026710262766,0.426133137080504,0.267096106940212,0.991709492165869,0.960950336825531,0.127612712494584,1.11273558941105,3.253918845081,1.5740617341532,0,1.23213432070436,0.532306030317022,0.869932992075073,0,2.14687330112987,0.372158369359667,0,0.571890581771475,1.535386747868,1.71175595213568,0.95460974377781,1.56989728039846,0.719489830333259,2.47083326762449,0.471249609382746,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,0.272999822815972,2.12108147930569,1.13008116620243,0.551365343546124,0,1.75380354101505,5.20897980840019,1.9676842561399,0.405820753925408,0.6196469961995,0.281695602532241,0.286822704408103,0.0982490410131212,0,1.41904425628239,4.43326034125095,2.30506425071931,0,0.699869440489966,0.577332676353072,0.670302275535787,0,0.188287601553558,0,0,2.66058092122005,0,1.01489521846434,0,2.27858874869665,0.238231775457789,0,0,0,6.34500141035416,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,1.68426486367398,0.586032717087576,0,0,0,9.78852387424529,2.37571744666111,3.99308912729002,0,0.562677665642051,0.556543525114529,0,0,0.597743964753209,1.65770349318689,0.251932747854276,2.0453736500431,0,0.933118762985422,0.179736702294654,1.25314822272926,0,0.0986434056369336,2.3948309234694,1.11136990144637,0,0.185536196323703,0,1.82299432759663,0,1.44999915086959,0.796554137998498,1.77977555204936,2.36387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0.139423744278603,0.461701551022782,0.569710279235006,0.46112780877612,0.269272933229316,0.434589487688032,6.06102203490647,0.457987967009312,9.59462596833542,0,0,0,0,0,0,0,0,0.210998064528027,0.979396848954886,0,0,3.98104772431402,1.23840590304675,4.888241159469,0.593042257361244,0.86494757262552,1.46190729307638,0.067401132980677,2.40773294189637,0.234264445725339,0,0,0.728341138602278,1.18375320854817,1.20990716048664,0.30607276163049,0.379119477770928,0,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0.284609546029793,0.277349346026277,11.2813829917835,0.293977192243133,0,1.39781334593624,0,1.83837029449262,1.09633975629278,1.8065400551706,1.06687918137261,0,0.90392296312213,0,0,0,0.977756913674015,0.0801588202515337,1.92107695265417,3.79638258206047,0.72045208577053,0,0,0.14405479798815,0.621262677827163,1.64985824231757,0.135904206073614,0.418411385249333,0.509991088181609,0,0,0.136905378891993,0,0,3.41753560563109,0.837847203816763,0.687481272035051,0.717873024576814,4.3929380109778,2.14613024068285,0.669514372325618,0.0671834724867263,0,0,0.236349546921671,0.576911008668165,0.471824806979294,0.295282444544246,0.0846733320657845,0.795229689809303,0.817220436669454,0.160753148465019,0.412618309791701,0,0,0,0,0.335434687599266,0.315222829196793,0.104909176269996,0.105600336519406,10.9365276993035,0.575745591958336,5.00286728461357,1.98627591109629,0,10.8599920350743,2.5926644736038,8.16468400273523,1.19730191562487,0,0.511164065356265,0.226624183040251,0,0,0,0.39669780522807,0.513260513652988,0,0.747511887973863,0.314408610199332,2.48543433208317,0,1.97611631897944,0.243585196761792,0,0.544017803369474,0.2506898940227,0.919036730290385,1.31149052283922,0,0,0.732157589411779,0,0,0.221858103073705,0,0,0,5.45936823149932,3.14011866899464,4.47005057426526,0,0.724605143054126,2.23882204330311,2.33713309847224,2.21922344601045,3.21985108967651,3.27038272278348,3.55924488638614,5.94984177832001,1.66354016139563,1.5543720058278,0.73927574994817,0.318593534327405,2.69881867298163,0.776314784381297,1.65882483136342,1.32920857278997,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0.859284456339908,0.928067519756987,1.19428766609585,0.800055529326307,1.03018711554838,1.6837474438296,0,0.385239660814607,0.214441591374926,0.521988583930423,0.453411851024545,0.231522474323834,0.734210113519403,0.537266523244462,0.308801447160972,0,0.176689145945881,0.578742114812744,0.506827321959218,0.256241518587947,1.0362910251936,3.64631947412859,0.276516872303462,0.389720617678777,0.531459361253452,0.490696182767533,5.56936743038901,0.491545817507439,0.422624246717254,1.19992437512958,0,2.92765465423387,0,0.920529751259204,0.979156554036111,1.24415452006595,0,0,0,0,0.169732529954025,0,0,0,1.90802610392051,0,0,3.87943538059752,4.2874366829448,0,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0.11796972334774,3.66857197043358,0.693153996902029,0,1.3807198521202,0.795664888465099,0.676892955143315,0,0,0,3.11166643269184,0.147856086217045,0,0,0,0.0634158101939068,0,1.09651553371436,0.992422356778588,0,0.766574565837572,0,0,0,0,0.354809480650555,0.115233987555779,0.342976018874837,0,0,0.472775363535873,0.444925607568277,0.39246546425257,0.157115589916002,3.64353812307926,0.913158720509496,0.863710364874486,1.9110067515482,0.142953088353313,0,0,0,2.40513409419076,0.414432328326074,1.0243108625637,1.38251932362818,1.72090943528111,0.946656005844523,0.681707238073262,2.54032230114557,3.6657098967048,3.1020638566432,1.91107787795487,1.11855431797792,0.196300467230486,0.121917924982269,0,0.307988420568741,0,3.39997695141398,0,0,0,0.11294608203896,0,0,1.92935395269862,5.68254857310289,0.940634592723046,1.47088993052343,0,0.588925401344836,0,0.8453114551668,0.169927114687817,0,0.128915775947154,0,0.357107877211315,1.41157948686277,0.320965466756673,0.730336388246517,3.66983426723633,0.143339583151451,0.315543124386369,0.0679914901909147,0.436350690340377,5.81929524566941,4.09194519983426,3.23522940041993,2.16313281061895,0,0,0,0,0,0,0,0.303114792872958,0.803892390468535,0,0.20686599172379,4.05144565611864,1.42838658878244,0,0.124149428591716,0.897054900644907,0,0.202117188958219,3.48346796635138,1.02669990325584,0.134704106029175,0.286888821570705,3.99192427855216,0.0814032686109745,0.213454691755431,1.9307228228694,1.97615444634491,2.34640942403454,0.244482888365733,0,0.665756774185513,1.40891655513718,0.641136984606466 | |||
|short_description=p@chr14:55609308..55609363,+ | |||
}} |
Revision as of 20:14, 11 January 2014
Short description: | p@chr14:55609308..55609363, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr14:55609308..55609363, + |
Coexpression cluster: | C1200_Monocytederived_Melanocyte_CD14_large_amniotic_Mast_melanoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.36e-29 | 48 |
phagocyte | 7.36e-29 | 48 |
myeloid lineage restricted progenitor cell | 3.48e-27 | 66 |
monopoietic cell | 2.27e-25 | 59 |
monocyte | 2.27e-25 | 59 |
monoblast | 2.27e-25 | 59 |
promonocyte | 2.27e-25 | 59 |
granulocyte monocyte progenitor cell | 1.62e-24 | 67 |
classical monocyte | 3.88e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.88e-24 | 42 |
macrophage dendritic cell progenitor | 6.96e-24 | 61 |
myeloid leukocyte | 4.06e-22 | 72 |
myeloid cell | 1.80e-09 | 108 |
common myeloid progenitor | 1.80e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 9.68e-09 | 120 |
nongranular leukocyte | 2.18e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.98e-25 | 76 |
bone element | 6.17e-24 | 82 |
skeletal element | 2.19e-21 | 90 |
hematopoietic system | 4.31e-20 | 98 |
blood island | 4.31e-20 | 98 |
skeletal system | 8.98e-20 | 100 |
musculoskeletal system | 3.95e-18 | 167 |
immune system | 2.43e-17 | 93 |
hemolymphoid system | 4.32e-16 | 108 |
lateral plate mesoderm | 2.73e-12 | 203 |
mesoderm | 4.76e-12 | 315 |
mesoderm-derived structure | 4.76e-12 | 315 |
presumptive mesoderm | 4.76e-12 | 315 |