FFCP PHASE1:Hg19::chr14:23284561..23284595,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11065 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=22bp_to_uc001wgr.3_5end | |||
|coexpression_cluster_id=C2288 | |||
|description=CAGE_peak_2_at_SLC7A7_5end | |||
|id=chr14:23284561..23284595,- | |||
|ontology_enrichment_celltype=CL:0002194!4.85e-34!63;CL:0000576!4.85e-34!63;CL:0000040!4.85e-34!63;CL:0000559!4.85e-34!63;CL:0002009!6.75e-33!65;CL:0000766!2.59e-32!76;CL:0002057!2.73e-29!42;CL:0000839!5.66e-28!70;CL:0000557!6.03e-28!71;CL:0000860!1.17e-25!45;CL:0000763!1.92e-15!112;CL:0000049!1.92e-15!112;CL:0002087!1.25e-14!119;CL:0000738!1.81e-14!140;CL:0002031!2.30e-11!124;CL:0000037!2.97e-08!172;CL:0000566!2.97e-08!172;CL:0002393!6.48e-08!9;CL:0002397!6.48e-08!9;CL:0000988!1.15e-07!182;CL:0002032!3.48e-07!165;CL:0000837!3.48e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.95e-30;39!CL:0000234;7.95e-30;39!CL:0000576;2.33e-29;48!CL:0000860;7.13e-29;33!CL:0002057;7.13e-29;33!CL:0000766;3.62e-22;69!CL:0000763;6.24e-09;100!CL:0000235;2.87e-08;6!CL:0002087;8.04e-08;104!CL:0002393;1.43e-07;6!CL:0002397;1.43e-07;6!CL:0000738;8.07e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.28e-54,59;CL:0000576,7.28e-54,59;CL:0000040,7.28e-54,59;CL:0000559,7.28e-54,59;CL:0000766,1.25e-51,72;CL:0002009,2.70e-51,61;CL:0000473,6.56e-48,48;CL:0000234,6.56e-48,48;CL:0000839,1.44e-45,66;CL:0000557,1.59e-44,67;CL:0000860,6.24e-41,42;CL:0002057,6.24e-41,42;CL:0000763,1.20e-26,108;CL:0000049,1.20e-26,108;CL:0002087,1.37e-25,115;CL:0000738,2.12e-25,136;CL:0002031,1.93e-20,120;CL:0000037,3.93e-16,168;CL:0000988,1.12e-15,177;CL:0002032,1.67e-14,161;CL:0000837,1.67e-14,161;CL:0002393,1.44e-10,9;CL:0002397,1.44e-10,9;CL:0000235,2.89e-08,6;CL:0000134,2.63e-07,354;CL:0002320,6.40e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-29;42!CL:0000049;5.20e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.08e-26!102;UBERON:0003061!4.08e-26!102;UBERON:0002193!1.46e-23!112;UBERON:0002371!1.47e-22!80;UBERON:0002405!1.67e-21!115;UBERON:0003081!4.11e-21!216;UBERON:0001474!1.78e-19!86;UBERON:0004765!1.46e-14!101;UBERON:0001434!1.46e-14!101;UBERON:0000926!2.52e-13!448;UBERON:0004120!2.52e-13!448;UBERON:0006603!2.52e-13!448;UBERON:0002204!6.31e-12!167;UBERON:0000922!8.92e-08!612;UBERON:0000923!1.39e-07!604;UBERON:0005291!1.39e-07!604;UBERON:0006598!1.39e-07!604;UBERON:0002532!1.39e-07!604;UBERON:0002050!1.90e-07!605;UBERON:0005423!1.90e-07!605;UBERON:0000062!6.54e-07!511;UBERON:0007023!8.00e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.01e-07;15!UBERON:0000179;2.01e-07;15!UBERON:0000463;2.01e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.11e-42,98;UBERON:0003061,3.11e-42,98;UBERON:0002193,4.78e-38,108;UBERON:0002371,1.99e-36,76;UBERON:0001474,4.69e-32,82;UBERON:0002405,2.76e-31,93;UBERON:0003081,1.20e-29,203;UBERON:0004765,3.52e-27,90;UBERON:0001434,2.94e-22,100;UBERON:0000926,1.61e-18,315;UBERON:0004120,1.61e-18,315;UBERON:0006603,1.61e-18,315;UBERON:0002204,2.64e-14,167;UBERON:0000178,2.02e-07,15;UBERON:0000179,2.02e-07,15;UBERON:0000463,2.02e-07,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0,2.21160542851358,2.79120467188971,1.52908960491121,1.84636884759917,0,0,3.36162573225888,1.80808358407193,1.46062018077475,1.46379839637152,0,0,0,0,0,0,0.458480434487708,0.0821005894499457,0.157421562627358,35.4027849164014,11.8987113410136,13.7786349751308,0,0,0,0,0,0.293600439334847,21.6058209327432,14.0381113229099,24.7392392616071,51.2766436009427,42.1061765824673,40.9545152538357,25.5900900252034,21.9168047339509,31.0507598320405,21.383471395323,14.3908760807639,14.5561994320699,13.8092348314632,13.3203567395132,19.1550606209754,17.5820297175675,20.6555098746824,16.251178391321,19.2007186333457,20.4679612543384,25.8432007111847,18.3650335422542,26.3161802202397,18.5407766481722,10.8850929061616,15.7576289521089,23.0161365287655,23.2167390902867,17.0215567407342,16.8162007228805,13.3161792586074,15.644487552606,18.67824064464,13.3187890579341,17.6773265274031,19.6206680213348,38.8709726813973,42.0956513930786,56.1885169962447,44.1451520405726,38.1449307817426,38.2526896339051,24.5110959617474,34.4125851554426,35.0715175228097,0,0,0,2.13365111283254,0,0,0.661044872784862,0,0,0,0,0,1.68152568894461,0,0,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.95569624297229,0,0,2.55977702432214,1.27986611154418,1.24930726552346,1.4206635122641,0,0,0,0,0,3.35350429851818,2.81297636055767,0,0,0.144846518960824,1.5905718941022,0,0,0,0.351339142772504,6.41797469938792,0,0,17.5255592573529,15.6716763569341,27.9211717089617,1.90792499444274,1.71598473234038,1.11437250398869,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,4.81195944325403,0.794455084879313,4.30254931123221,2.4826786753885,0,3.20246987189115,4.9333509683432,1.55605517699883,0.67355336034844,0.490385709340376,1.36221684880438,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0.919463387397059,0.150238058906597,5.89847352432109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,1.2781333715647,0.725627385107593,1.00928340350251,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,12.347220339942,14.7008711385542,1.26755034821831,3.9313088667105,2.36315962672562,0,43.291930367176,0,0,0,0.100528972411631,0,0,0,0,0,0.469634776943287,0,0.462985512576611,0,0,0,53.6753073270526,76.75339896567,62.4250881612659,0.93733833986777,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.448524337381443,0,0.07333828582095,9.17829181880222,0,0,0.26593811658487,0,0,0,0,1.85871391755592,2.17048642156577,0.823240336780769,0,1.06617584622764,0.791951872933429,1.80863626235752,0.871533458600294,15.0959216684906,43.7845610308286,49.2211949603484,56.9251636604185,0,0,0,0.144781306667579,0,0.358121926479791,0,1.18218456121156,0,1.41177339907723,0.76228387266739,0,0,2.34522771468088,0,2.99602809578873,2.99161459204025,4.55857064779639,0,0,0,0,0,0,0,0.601892199455438,0,3.10419213877515,0,0.184369168541703,0.260650843404249,0.391602314925481,1.37257369524342,16.7482101159539,15.0999940573032,12.0602140317892,1.21251028578504,1.66435439510497,6.95497674658265,0,0.153461973288062,0.280660094433074,0.256278298511402,0,1.60853921143608,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,36.2578348774867,0,0,0.229628896329213,0.728364672026868,0.786746489756545,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,1.89662506280697,1.50506932156456,2.29388645740534,0,0.447749509444357,0,0,0,8.85639543389205,0.976135183992909,4.22468147755661,0,0,0,0,0,1.64340221096607,0,0,0.137836572484531,0.859361958946189,0,0.426133137080504,6.58837063785856,0,0,0.127612712494584,0,0,0.31481234683064,0,1.23213432070436,0.532306030317022,0,0,0.572499546967965,0,2.21465597303108,2.09693213316207,0,0,0,1.56989728039846,0.539617372749944,1.09814811894422,0.471249609382746,0.606547444719948,7.92551605865041,0,0,2.43713489631284,1.05650146756755,0.136499911407986,0.848432591722276,0,0,0,0,0,0.655894752046633,0,0.92947049429925,0.563391205064483,0.143411352204052,1.47373561519682,0,0.709522128141196,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,4.56702848308952,6.88173486428138,6.83576624608995,10.0057345692271,11.9295059194996,6.48473311192717,9.18053443304795,7.13812658664843,3.41837027607914,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0.626719583092093,0,0,0,0,0.851692475380653,1.03051603426729,3.37964840739304,6.26293102098765,6.50711652676443,0.390776190804081,0,0,0,0,0,0.748562161632879,5.86032717087576,0,1.00299045849731,0,0.95497793895076,1.18785872333055,0,0,0.140669416410513,6.78983100639726,0,0,1.39473591775749,2.21027132424918,0,0.102268682502155,0,0,0,0.179021174675609,0,0.493217028184668,9.57932369387759,0,0,0.278304294485554,1.99613798001194,0,0,2.17499872630438,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.384751292518985,5.24133456896206,11.2976313150149,27.9146274114391,10.2128529606688,10.8460394308853,19.876677768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| |||
|short_description=p2@SLC7A7 | |||
}} |
Revision as of 19:09, 11 January 2014
Short description: | p2@SLC7A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC7A7_5end |
Coexpression cluster: | C2288_mesothelioma_colon_small_Intestinal_Prostate_CD14_Macrophage |
Association with transcript: | 22bp_to_uc001wgr.3_5end |
EntrezGene: | SLC7A7 |
HGNC: | 11065 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 7.28e-54 | 59 |
monocyte | 7.28e-54 | 59 |
monoblast | 7.28e-54 | 59 |
promonocyte | 7.28e-54 | 59 |
myeloid leukocyte | 1.25e-51 | 72 |
macrophage dendritic cell progenitor | 2.70e-51 | 61 |
defensive cell | 6.56e-48 | 48 |
phagocyte | 6.56e-48 | 48 |
myeloid lineage restricted progenitor cell | 1.44e-45 | 66 |
granulocyte monocyte progenitor cell | 1.59e-44 | 67 |
classical monocyte | 6.24e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.24e-41 | 42 |
myeloid cell | 1.20e-26 | 108 |
common myeloid progenitor | 1.20e-26 | 108 |
nongranular leukocyte | 1.37e-25 | 115 |
leukocyte | 2.12e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 1.93e-20 | 120 |
hematopoietic stem cell | 3.93e-16 | 168 |
hematopoietic cell | 1.12e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.67e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-14 | 161 |
intermediate monocyte | 1.44e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.44e-10 | 9 |
macrophage | 2.89e-08 | 6 |
mesenchymal cell | 2.63e-07 | 354 |
connective tissue cell | 6.40e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.11e-42 | 98 |
blood island | 3.11e-42 | 98 |
hemolymphoid system | 4.78e-38 | 108 |
bone marrow | 1.99e-36 | 76 |
bone element | 4.69e-32 | 82 |
immune system | 2.76e-31 | 93 |
lateral plate mesoderm | 1.20e-29 | 203 |
skeletal element | 3.52e-27 | 90 |
skeletal system | 2.94e-22 | 100 |
mesoderm | 1.61e-18 | 315 |
mesoderm-derived structure | 1.61e-18 | 315 |
presumptive mesoderm | 1.61e-18 | 315 |
musculoskeletal system | 2.64e-14 | 167 |
blood | 2.02e-07 | 15 |
haemolymphatic fluid | 2.02e-07 | 15 |
organism substance | 2.02e-07 | 15 |