FFCP PHASE1:Hg19::chr14:22962743..22962754,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-154bp_to_uc001weo.2_5end | |||
|description=CAGE_peak_1_at_uc001weo.2_5end | |||
|id=chr14:22962743..22962754,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.37e-30!52;CL:0000542!2.00e-29!53;CL:0000051!2.00e-29!53;CL:0000625!5.44e-25!11;CL:0000791!3.64e-23!18;CL:0000789!3.64e-23!18;CL:0002420!3.64e-23!18;CL:0002419!3.64e-23!18;CL:0000790!3.64e-23!18;CL:0000084!1.19e-19!25;CL:0000827!1.19e-19!25;CL:0000738!2.48e-15!140;CL:0002087!2.64e-14!119;CL:0002031!3.29e-12!124;CL:0000037!2.19e-11!172;CL:0000566!2.19e-11!172;CL:0002032!5.13e-11!165;CL:0000837!5.13e-11!165;CL:0000988!1.93e-10!182;CL:0000893!3.83e-10!2;CL:0002489!3.83e-10!2;CL:0000809!3.83e-10!2;CL:0000808!3.83e-10!2;CL:0000894!3.83e-10!2;CL:0000806!3.83e-10!2;CL:0000807!3.83e-10!2;CL:0000805!3.83e-10!2;CL:0002425!3.83e-10!2;CL:0000945!1.57e-08!24;CL:0000826!1.57e-08!24;CL:0000623!9.60e-07!3;CL:0000825!9.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000946;4.27e-34;1!CL:0000786;4.27e-34;1!CL:0000945;3.86e-13;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,7.06e-34,1;CL:0000786,7.06e-34,1;CL:0000980,7.06e-34,1;CL:0000785,1.07e-17,2;CL:0000955,1.07e-17,2;CL:0000818,1.07e-17,2;CL:0000954,1.07e-17,2;CL:0000816,1.07e-17,2;CL:0000945,3.78e-13,24;CL:0000826,3.78e-13,24;CL:0000817,2.89e-12,3;CL:0000838,1.03e-10,52;CL:0000542,1.61e-10,53;CL:0000051,1.61e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000954;8.34e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.45e-12;3!UBERON:0004177;6.33e-08;5!UBERON:0005057;6.33e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.85e-12,3;UBERON:0004854,1.85e-12,3;UBERON:0009034,1.85e-12,3;UBERON:0002095,1.85e-12,3;UBERON:0004782,1.85e-12,3;UBERON:0003281,1.85e-12,3;UBERON:0009664,1.85e-12,3;UBERON:0002296,1.85e-12,3;UBERON:0005602,1.85e-12,3;UBERON:0001179,1.85e-12,3;UBERON:0006293,1.85e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,1.06730766284929,1.25937250101887,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0.383220493601921,0.68725489096526,0.759059076058509,0.318565414324097,0,0.950452044448374,0.301150238155546,1.02389288923535,0,0.236777252044017,0.821127996921047,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.591092280605782,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,1.69899965072379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p1@uc001weo.2 | |||
}} |
Revision as of 19:07, 11 January 2014
Short description: | p1@uc001weo.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001weo.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_uc001weo.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 7.06e-34 | 1 |
plasma cell | 7.06e-34 | 1 |
plasmablast | 7.06e-34 | 1 |
mature B cell | 1.07e-17 | 2 |
pre-B-II cell | 1.07e-17 | 2 |
transitional stage B cell | 1.07e-17 | 2 |
small pre-B-II cell | 1.07e-17 | 2 |
immature B cell | 1.07e-17 | 2 |
lymphocyte of B lineage | 3.78e-13 | 24 |
pro-B cell | 3.78e-13 | 24 |
precursor B cell | 2.89e-12 | 3 |
lymphoid lineage restricted progenitor cell | 1.03e-10 | 52 |
lymphocyte | 1.61e-10 | 53 |
common lymphoid progenitor | 1.61e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.85e-12 | 3 |
gastrointestinal system mesentery | 1.85e-12 | 3 |
stomach region | 1.85e-12 | 3 |
mesentery | 1.85e-12 | 3 |
gastrointestinal system serosa | 1.85e-12 | 3 |
mesentery of stomach | 1.85e-12 | 3 |
gut mesentery | 1.85e-12 | 3 |
dorsal mesentery | 1.85e-12 | 3 |
dorsal mesogastrium | 1.85e-12 | 3 |
peritoneal cavity | 1.85e-12 | 3 |
spleen primordium | 1.85e-12 | 3 |