FFCP PHASE1:Hg19::chr14:21994337..21994442,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10526 | |||
|TSSclassifier=strong | |||
|UniProt=E7EW59,F5H433 | |||
|association_with_transcript=0bp_to_ENST00000450879,ENST00000537235,uc001wbf.3,uc010tly.1,uc010tlz.1_5end | |||
|coexpression_cluster_id=C3408 | |||
|description=CAGE_peak_1_at_SALL2_5end | |||
|id=chr14:21994337..21994442,- | |||
|ontology_enrichment_celltype=CL:0000133!3.18e-09!59;CL:0002319!2.32e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.39e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.22e-08,59;CL:0002319,1.34e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-08;82 | |||
|ontology_enrichment_disease=DOID:3095!4.55e-07!22;DOID:2994!4.55e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.82e-07;22!DOID:2994;3.82e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.89e-07,22;DOID:2994,3.89e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.92e-41!94;UBERON:0001016!5.92e-41!94;UBERON:0005743!2.05e-40!86;UBERON:0001017!6.04e-39!82;UBERON:0002346!6.16e-35!90;UBERON:0003075!6.28e-33!86;UBERON:0007284!6.28e-33!86;UBERON:0000955!4.88e-32!69;UBERON:0006238!4.88e-32!69;UBERON:0001049!1.78e-31!57;UBERON:0005068!1.78e-31!57;UBERON:0006241!1.78e-31!57;UBERON:0007135!1.78e-31!57;UBERON:0000924!1.74e-30!173;UBERON:0006601!1.74e-30!173;UBERON:0002616!2.46e-30!59;UBERON:0004121!1.18e-28!169;UBERON:0000033!6.59e-26!123;UBERON:0000153!9.84e-26!129;UBERON:0007811!9.84e-26!129;UBERON:0003056!4.52e-25!61;UBERON:0007023!1.19e-23!115;UBERON:0003080!2.06e-22!42;UBERON:0000481!2.09e-22!347;UBERON:0002780!2.35e-22!41;UBERON:0001890!2.35e-22!41;UBERON:0006240!2.35e-22!41;UBERON:0000119!9.31e-22!312;UBERON:0000483!5.11e-21!309;UBERON:0000475!2.35e-20!365;UBERON:0002020!7.66e-19!34;UBERON:0003528!7.66e-19!34;UBERON:0001893!1.18e-18!34;UBERON:0002791!3.42e-18!33;UBERON:0001869!1.05e-17!32;UBERON:0000025!1.13e-15!194;UBERON:0000477!6.50e-15!286;UBERON:0004111!1.48e-14!241;UBERON:0000956!8.26e-14!25;UBERON:0000203!8.26e-14!25;UBERON:0002619!8.75e-13!22;UBERON:0001950!6.90e-12!20;UBERON:0000922!1.09e-11!612;UBERON:0003076!3.61e-10!15;UBERON:0003057!3.61e-10!15;UBERON:0000064!7.46e-10!219;UBERON:0002050!2.74e-09!605;UBERON:0005423!2.74e-09!605;UBERON:0000468!3.46e-09!659;UBERON:0000923!5.02e-09!604;UBERON:0005291!5.02e-09!604;UBERON:0006598!5.02e-09!604;UBERON:0002532!5.02e-09!604;UBERON:0004732!9.03e-09!13;UBERON:0004733!1.92e-08!12;UBERON:0002028!1.92e-08!12;UBERON:0007277!1.92e-08!12;UBERON:0003103!4.89e-07!69;UBERON:0002680!6.32e-07!9;UBERON:0001895!6.32e-07!9;UBERON:0010092!6.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.84e-18;53!UBERON:0002616;7.84e-18;53!UBERON:0002780;2.77e-17;41!UBERON:0001890;2.77e-17;41!UBERON:0003528;3.79e-17;34!UBERON:0002020;3.79e-17;34!UBERON:0001869;4.60e-17;32!UBERON:0002791;4.69e-17;32!UBERON:0001893;4.79e-17;34!UBERON:0001017;1.02e-15;75!UBERON:0000955;6.42e-15;68!UBERON:0000956;1.37e-14;25!UBERON:0000203;1.37e-14;25!UBERON:0001016;1.98e-14;83!UBERON:0002619;1.66e-13;22!UBERON:0001950;1.54e-12;20!UBERON:0000922;2.66e-09;49!UBERON:0004732;3.04e-09;13!UBERON:0004733;6.60e-09;12!UBERON:0002028;6.60e-09;12!UBERON:0011216;1.13e-08;132!UBERON:0002680;2.66e-07;9!UBERON:0001895;2.66e-07;9!UBERON:0000125;7.72e-07;9!UBERON:0002308;7.72e-07;9!UBERON:0007023;8.53e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.92e-41,89;UBERON:0001017,5.40e-41,81;UBERON:0002346,1.14e-37,86;UBERON:0003075,1.57e-35,82;UBERON:0007284,1.57e-35,82;UBERON:0000955,1.13e-33,68;UBERON:0006238,1.13e-33,68;UBERON:0001049,3.18e-33,56;UBERON:0005068,3.18e-33,56;UBERON:0006241,3.18e-33,56;UBERON:0007135,3.18e-33,56;UBERON:0000073,2.89e-31,53;UBERON:0002616,2.89e-31,53;UBERON:0004121,1.92e-30,171;UBERON:0000924,1.92e-30,171;UBERON:0006601,1.92e-30,171;UBERON:0011216,1.26e-27,223;UBERON:0010314,3.52e-27,132;UBERON:0003056,5.41e-27,61;UBERON:0010371,2.28e-25,104;UBERON:0002780,1.31e-23,41;UBERON:0001890,1.31e-23,41;UBERON:0003080,1.31e-23,41;UBERON:0006240,1.31e-23,41;UBERON:0007023,6.18e-23,114;UBERON:0003528,6.98e-20,34;UBERON:0002020,6.98e-20,34;UBERON:0001893,1.10e-19,34;UBERON:0000119,5.08e-19,309;UBERON:0001869,1.12e-18,32;UBERON:0002791,1.27e-18,32;UBERON:0000483,2.64e-18,306;UBERON:0000956,1.52e-14,25;UBERON:0000203,1.52e-14,25;UBERON:0000025,5.87e-14,192;UBERON:0002619,1.85e-13,22;UBERON:0004111,1.62e-12,240;UBERON:0001950,1.65e-12,20;UBERON:0000922,3.07e-12,592;UBERON:0003076,1.10e-10,15;UBERON:0003057,1.10e-10,15;UBERON:0005423,1.65e-09,581;UBERON:0004732,3.32e-09,13;UBERON:0004733,7.40e-09,12;UBERON:0002028,7.40e-09,12;UBERON:0007277,7.40e-09,12;UBERON:0002680,2.99e-07,9;UBERON:0001895,2.99e-07,9;UBERON:0010092,2.99e-07,9;UBERON:0000923,3.73e-07,560;UBERON:0010316,3.73e-07,560;UBERON:0005291,3.73e-07,560;UBERON:0006598,3.73e-07,560;UBERON:0010317,3.73e-07,560;UBERON:0002532,3.73e-07,560;UBERON:0002050,6.67e-07,564;UBERON:0003103,6.71e-07,68;UBERON:0000125,7.99e-07,9;UBERON:0002308,7.99e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,1.40954404095971,0,2.23480547213644,0.872338524100369,0,0,1.82829939739887,5.16041266653169,5.58240934377942,0.436882744260345,0.791300934685361,8.78741106016331,13.5872924048445,1.34465029290355,3.01347264011988,2.19093027116212,1.46379839637152,22.1617904538218,19.1760649769598,21.0014663390319,13.7393273822907,12.5924471067053,11.8010081219115,1.98674854944673,1.47781061009902,1.65292640758726,0,0.383829398097213,0.154816123316076,0.919421224478927,0.90361775633475,0.369754010166788,0,0,1.17440175733939,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,0.526768169550154,1.180258620683,0,0.822405995998037,0.334372990781356,1.62961133316795,0.473447805734733,3.89653456815823,0.445641827540694,0.294605907474837,0.443067789167242,0.541607727530031,0.128091319725675,0.260118695119756,0.822189523018381,1.10540007114339,0,0.444859689486181,1.87278579662799,0,0.339928028092699,0.383220493601921,0.68725489096526,0.253019692019503,0.637130828648193,0,0.950452044448374,1.05402583354441,1.27986611154418,0,0.710331756132051,0,0.604820229674197,0.267440195783507,1.01377082717959,12.1903433156981,6.70700859703636,3.45228916977532,0.361439152384566,2.50668955317945,1.59331170856906,0.795285947051099,1.94653948121054,17.6780108096807,15.0775990274543,14.0535657109002,7.85874452986276,2.18577172975525,1.11235332835329,0,0,0,0.238490624305342,0,0.371457501329565,0.993812036833525,0.860234595106124,1.38856200643038,1.13061588384802,0.419499436209906,0.550236083880135,0.626984899610432,0.775250277507987,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,1.22031028774085,0.367663080345869,0,2.85759130509055,5.38870494302808,4.0540132973996,0,0.949265659568129,0.916008719652036,0,0,1.3082821564276,0,1.2663051166458,1.58891016975863,2.0078563452417,1.41867352879343,5.60677600142307,1.06748995729705,1.72667283892012,3.42332138939743,2.15537075311501,3.26923806226917,16.6493170409425,14.404398112,5.38939293217732,0.312160076830321,0.570471821544449,0.448346041655403,2.3486899728753,1.61872944368132,2.10676210053373,1.83738754129404,7.61572767332961,3.40975077880026,2.37600571456411,2.71993622206413,8.19145225744224,3.59309070908119,2.69337782326506,5.38009635449446,0.831192346452549,2.63386572528503,0.612975591598039,2.70428506031874,2.04177929688038,1.61450672119976,3.63047560991565,1.05965950579781,2.40072876867522,2.26715564324566,0.772921620136887,1.11670113798954,0.168776332241266,0.779496041289589,1.26216887122057,2.48534726334208,5.65761198865842,3.90510551768276,1.61203357164224,1.69560592310488,0.193260853163297,0.545492241181669,0.286804595389004,36.7140855450082,28.2288406524764,36.6010920038983,28.817773294273,25.4844059384385,22.2636189036256,3.12899064659632,2.57296375277154,1.38134921352481,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,2.21446636387394,7.01208869017229,16.8745344645874,8.82052268313252,1.26755034821831,0,1.18157981336281,5.73902029239046,5.411491295897,4.46076306776166,0.768251997860379,0,0.502644862058154,3.98130314181677,7.81939932744779,3.11980435583874,7.21656710126366,13.7957181920341,6.69229557144183,0.866198686566443,0.462985512576611,0.570762456703795,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0.492663237895943,0.176096868026452,0.829312462163088,1.29707958075265,1.38866676769018,1.39695367442772,2.67391897890794,3.51652341630141,3.4214489204541,0.616964956219941,0.901029173531752,3.71574362419752,7.73704481982989,17.0024426844979,3.0802080044799,2.97324946242889,14.3062578340753,0,2.12750493267896,3.12022310734098,5.65856223376713,2.83698264046557,3.72991050622539,4.86125178437702,4.34097284313154,8.23240336780769,0,2.84313558994037,0.791951872933429,12.6604538365026,6.10073421020206,16.5955165362215,0,0,0,0.718874566474748,8.04033550838797,5.70547620162874,0,1.43833425785268,0.537182889719687,0,0.197030760201927,0.431255149719035,0.641715181398742,33.2863957731427,39.0419561572865,10.05275456611,14.0713662880853,8.93114252314428,0,0,0.414415513436035,11.7783832050374,20.5069913634468,6.78162559249339,2.70362119990049,0.713715955188647,0.946214490203608,3.86566669475954,3.61135319673263,0,5.17365356462525,2.65690239414175,3.87175253937577,3.30157734978715,36.223214130607,17.8434580381645,1.03384013061444,0,0.106727557803444,0.606255142892519,0,5.14063498660456,0.248107807818777,0.153461973288062,0,1.02511319404561,0.511707249066704,0.965123526861645,0,1.07946785661859,1.9531789784444,1.06765302817952,2.07701771673448,1.39452454151951,3.62578348774867,0.200506470303285,0.368323955743585,1.37777337797528,1.82091168006717,4.19598127870157,9.02399225814824,7.47048769912823,22.7461433061288,23.3822759445217,8.86633682700156,1.13733384070897,0.510281115829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| |||
|short_description=p1@SALL2 | |||
}} |
Revision as of 19:02, 11 January 2014
Short description: | p1@SALL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SALL2_5end |
Coexpression cluster: | C3408_cerebellum_pineal_rhabdomyosarcoma_neuroectodermal_brain_Pericytes_iPS |
Association with transcript: | 0bp_to_ENST00000450879, ENST00000537235, uc001wbf.3, uc010tly.1, uc010tlz.1_5end |
EntrezGene: | SALL2 |
HGNC: | 10526 |
UniProt: | E7EW59F5H433 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.22e-08 | 59 |
neural cell | 1.34e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.89e-07 | 22 |
germ cell cancer | 3.89e-07 | 22 |