FFCP PHASE1:Hg19::chr13:110802649..110802660,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1282 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=2202 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=48bp_to_M10941_5end | |||
|description=CAGE_peak_12_at_COL4A1_5end | |||
|id=chr13:110802649..110802660,- | |||
|ontology_enrichment_celltype=CL:0005020!1.38e-08!6;CL:0002138!1.38e-08!6;CL:0005022!1.38e-08!6;CL:0000055!2.88e-07!180;CL:0000669!4.66e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000669;5.79e-19;4!CL:0002575;3.51e-17;2!CL:0002138;7.79e-13;6!CL:0000222;3.00e-09;1!CL:0002557;3.00e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,5.47e-19,4;CL:0002575,2.65e-17,2;CL:0005020,1.03e-12,6;CL:0002138,1.03e-12,6;CL:0005022,1.03e-12,6;CL:0002557,4.87e-09,1 | |||
|ontology_enrichment_development_v019=CL:0005022;7.79e-13;6!UBERON:0000358;8.66e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.16e-09;1!DOID:2513;3.00e-09;1!DOID:4235;3.00e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,9.44e-10,1;DOID:2513,1.56e-09,1;DOID:4235,1.69e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001473!5.52e-11!8;UBERON:0004536!5.52e-11!8;UBERON:0006558!5.52e-11!8;UBERON:0001009!2.89e-10!113;UBERON:0004535!3.41e-10!110;UBERON:0002049!5.53e-10!79;UBERON:0007798!5.53e-10!79;UBERON:0002465!2.56e-08!10;UBERON:0003887!4.98e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.04e-16;8!UBERON:0004536;2.04e-16;8!UBERON:0006558;2.04e-16;8!UBERON:0002465;3.56e-13;10!UBERON:0002331;8.14e-08;10!UBERON:0005284;2.11e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.13e-16,8;UBERON:0004536,2.13e-16,8;UBERON:0006558,2.13e-16,8;UBERON:0002465,3.68e-13,10;UBERON:0002331,8.74e-08,10;UBERON:0000358,8.74e-08,10;UBERON:0000307,8.74e-08,10;UBERON:0000091,8.74e-08,10;UBERON:0000087,8.74e-08,10;UBERON:0007010,8.74e-08,10;UBERON:0007806,8.74e-08,10;UBERON:0008780,8.74e-08,10;UBERON:0005728,8.74e-08,10;UBERON:0005284,1.95e-07,5;UBERON:0002049,5.44e-07,78;UBERON:0007798,5.44e-07,78 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.563817616383885,1.0007329835313,0,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0.655324116390517,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0.417989933073621,2.84258435086262,0.71153252537342,1.00416183829401,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,1.06748995729705,0.98667019366864,0.311211035399766,0.67355336034844,0.326923806226917,2.72443369760877,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.300476117813194,1.02088964844019,0.179389635688862,0.213557388818567,0.423863802319124,0,0.103052529238439,0.515281080091258,0.37223371266318,0,0.292311015483596,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0.474541238222193,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.115930404975077,1.05667824812239,0.721832238805369,2.31492756288305,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.336393253036082,0.43596006883328,0.2933531432838,0.646358578788889,0,0,0.26593811658487,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0.791951872933429,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0,2.54541504701563,1.37257369524342,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0,0,1.28683136914886,0,0,0,0,0,0,0,0.200506470303285,0,0.229628896329213,0,0,0,0.15403067420883,0.784349769176855,0,0.633309773357254,0,0.510281115829547,0.863663664408557,6.16909010761157,0.270946437543853,2.00675909541941,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0.170453254832202,0.178064071293475,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,1.2655176988749,0.38126038784765,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,1.21746226177622,0.30982349809975,0.845086807596724,0,0.491245205065606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,1.55519793830904,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.446342914883745,0.53746777989381,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0.53168342911599,1.04349012362347,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0.453411851024545,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0.111855431797792,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,1.52934403219035,0.281951753939561,0.45120521581504,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0.215166616178029,0.665320713092027,0,0,0,0,4.69281884806909,0.244482888365733,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p12@COL4A1 | |||
}} |
Revision as of 18:39, 11 January 2014
Short description: | p12@COL4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_COL4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_M10941_5end |
EntrezGene: | COL4A1 |
HGNC: | 2202 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 5.47e-19 | 4 |
central nervous system pericyte | 2.65e-17 | 2 |
lymphangioblast | 1.03e-12 | 6 |
endothelial cell of lymphatic vessel | 1.03e-12 | 6 |
vascular lymphangioblast | 1.03e-12 | 6 |
fibroblast of pulmonary artery | 4.87e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 2.13e-16 | 8 |
lymph vasculature | 2.13e-16 | 8 |
lymphatic part of lymphoid system | 2.13e-16 | 8 |
lymphoid system | 3.68e-13 | 10 |
umbilical cord | 8.74e-08 | 10 |
blastocyst | 8.74e-08 | 10 |
blastula | 8.74e-08 | 10 |
bilaminar disc | 8.74e-08 | 10 |
inner cell mass | 8.74e-08 | 10 |
cleaving embryo | 8.74e-08 | 10 |
connecting stalk | 8.74e-08 | 10 |
inner cell mass derived epiblast | 8.74e-08 | 10 |
extraembryonic mesoderm | 8.74e-08 | 10 |
brain vasculature | 1.95e-07 | 5 |
vasculature | 5.44e-07 | 78 |
vascular system | 5.44e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 9.44e-10 | 1 |
basal cell carcinoma | 1.56e-09 | 1 |
spindle cell sarcoma | 1.69e-09 | 1 |