FFCP PHASE1:Hg19::chr13:102104716..102104735,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=9358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |||
|TSSclassifier=not | |||
|UniProt=O95965,F5GZX0 | |||
|association_with_transcript=-230bp_to_ENST00000376180,ENST00000478675,ENST00000537118,NM_004791,uc001vpb.2,uc001vpc.3,uc010agb.2_5end | |||
|coexpression_cluster_id=C698 | |||
|description=CAGE_peak_5_at_ITGBL1_5end | |||
|id=chr13:102104716..102104735,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.02e-20!180;CL:0000057!5.72e-13!75;CL:0000680!3.26e-10!57;CL:0000056!3.26e-10!57;CL:0000355!3.26e-10!57;CL:0000048!1.83e-08!430;CL:0000187!3.03e-08!54;CL:0000723!6.34e-08!436;CL:0002620!9.67e-08!23;CL:0000183!1.42e-07!59;CL:0000222!1.54e-07!119;CL:0002334!2.09e-07!12;CL:0000359!2.15e-07!32;CL:0000034!3.07e-07!444;CL:0000192!4.71e-07!42;CL:0000514!4.71e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.15e-14;12!CL:0000056;1.18e-11;4!CL:0002620;4.31e-11;23!CL:0000136;1.34e-10;13!CL:0002580;6.24e-10;3!CL:0002615;6.71e-10;3!CL:0002579;1.17e-09;3!CL:0000515;3.62e-09;3!CL:0000197;4.89e-08;6!CL:0000098;4.89e-08;6!CL:0002167;4.89e-08;6!CL:0002617;4.27e-07;2!CL:0000138;7.58e-07;6!CL:1000306;8.13e-07;4!CL:0002547;8.13e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.55e-15,76;CL:0002334,2.04e-14,12;CL:0000515,1.24e-11,4;CL:0002620,5.46e-11,23;CL:0002580,6.08e-10,3;CL:0002615,6.82e-10,3;CL:0002579,1.11e-09,3;CL:0000136,5.07e-09,15;CL:0000048,3.22e-08,427;CL:0000197,5.22e-08,6;CL:0000098,5.22e-08,6;CL:0002167,5.22e-08,6;CL:0000723,6.46e-08,433;CL:0000034,1.58e-07,441;CL:0002617,4.10e-07,2;CL:1000306,7.30e-07,4;CL:0002547,7.30e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.18e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.13e-09!83;UBERON:0002329!2.13e-09!83;UBERON:0003077!2.13e-09!83;UBERON:0003059!2.13e-09!83;UBERON:0007282!2.13e-09!83;UBERON:0009618!2.13e-09!83;UBERON:0007285!2.13e-09!83;UBERON:0002385!5.10e-09!63;UBERON:0001015!5.10e-09!63;UBERON:0000383!5.10e-09!63;UBERON:0001134!6.23e-09!61;UBERON:0002036!6.23e-09!61;UBERON:0003082!6.23e-09!61;UBERON:0003688!1.21e-08!6;UBERON:0002358!1.21e-08!6;UBERON:0003684!1.21e-08!6;UBERON:0001178!1.21e-08!6;UBERON:0004290!1.25e-08!70;UBERON:0004573!2.98e-08!33;UBERON:0004571!2.98e-08!33;UBERON:0000486!1.20e-07!82;UBERON:0001637!1.94e-07!42;UBERON:0003509!1.94e-07!42;UBERON:0004572!1.94e-07!42;UBERON:0002049!8.57e-07!79;UBERON:0007798!8.57e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.58e-18;6!UBERON:0002358;7.58e-18;6!UBERON:0003684;7.58e-18;6!UBERON:0001178;7.58e-18;6!UBERON:0004457;1.33e-11;9!UBERON:0000042;1.33e-11;9!UBERON:0000310;2.05e-07;10!UBERON:0005406;6.29e-07;2!UBERON:0004797;8.13e-07;4!UBERON:0000415;8.13e-07;4!UBERON:0007240;8.13e-07;4!UBERON:0005742;8.13e-07;4!UBERON:0005734;8.13e-07;4!UBERON:0004664;8.13e-07;4!UBERON:0004663;8.13e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.31e-18,6;UBERON:0002358,7.31e-18,6;UBERON:0003684,7.31e-18,6;UBERON:0001178,7.31e-18,6;UBERON:0004457,1.73e-08,12;UBERON:0000042,1.73e-08,12;UBERON:0002199,1.01e-07,46;UBERON:0002416,1.01e-07,46;UBERON:0000310,1.99e-07,10;UBERON:0004573,4.16e-07,33;UBERON:0004571,4.16e-07,33;UBERON:0005406,6.12e-07,2;UBERON:0000415,7.30e-07,4;UBERON:0007240,7.30e-07,4;UBERON:0005742,7.30e-07,4;UBERON:0005734,7.30e-07,4;UBERON:0004664,7.30e-07,4;UBERON:0004663,7.30e-07,4 | |||
|phase1_expression=27.9784704076657,9.84862409898522,16.0688020669407,19.0139266870948,14.3027550216732,21.8084631025092,15.1979926900986,0.631719873426831,0,0,0,0,0,0.495065411840187,0,0,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.50401373190767,1.01392563272577,2.3858578411533,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.825354125820202,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,8.44852317882041,4.30543739659571,2.91300197789081,6.88407889797153,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0.468642863667593,0,1.1409436430889,0.149448680551801,0,0,0,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0.877955241761676,0,0.600952235626387,0.113432183160021,2.69084453533293,0.640672166455702,1.05965950579781,0.900273288253207,0,2.06112432036503,1.11670113798954,3.20675031258406,2.43592512902997,1.51460264546469,1.10459878370759,0,2.13005755509969,1.71278566986988,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,2.7003999674239,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0,0.5867062865676,5.68795549334222,0,0.845302752556,0.797814349754612,1.04007436911366,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,2.15662369942424,1.14861935834114,5.70547620162874,9.55556624006023,4.31500277355805,3.04403637507822,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,6.86303843051664,6.0665856191035,9.14674007196821,13.471262724162,7.52365249319297,4.5481500811197,0,1.99267679560631,0.184369168541703,0,0,0,0,0,0,0,0,0,19.8486246255021,43.8901243603859,10.1037633995906,6.91951405980785,28.6556059477354,9.49038134747284,5.93672265779964,0,1.24293207719189,0.0821271560138091,0,0,0,0,0,1.60740227430449,0.728364672026868,0.524497659837696,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0,1.39453664789186,11.333244485903,0,0.308033580176089,1.06461206063404,0,0.37064843820784,0.715624433709956,0.744316738719335,1.58189712359363,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0,0.274537029736055,0.353437207037059,1.01091240786658,0,0,0,1.46228093778771,1.05650146756755,0.409499734223957,0.282810863907425,0,0,0.66343897524122,1.75380354101505,0,0,0,0,0,0.573645408816206,0.392996164052485,0,0,0.633322905892992,0.329294892959902,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,7.46495010388338,0,0,0,0,0,6.66821940867821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5796644907122,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,3.20702469264564,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,6.48539790376326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,2.28841683889275,0.542999601753713,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0,0.302461847526478,0.466311601748341,0.147855149989634,0.318593534327405,0,0.310525913752519,0.414706207840855,2.39257543102195,0,0,0.761610424337591,0,0,0,0,0.796191777397232,2.40016658797892,0.343395705182793,0.336749488765919,10.0947918582921,0,0,0,1.58694147858591,0,0,3.22359913946677,3.70561736593167,0,0.353378291891762,0,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0.327609848846413,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0.705351887381368,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0.462102664601353,1.90691047733584,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682986574053893,0.0887023701626388,0,0.342976018874837,0.0679697329768317,0,0,0.778619813244484,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0.801711364730253,0.207216164163037,0,0,0,0,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,1.73050624849516,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.143444410785353,0.332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| |||
|short_description=p5@ITGBL1 | |||
}} |
Revision as of 18:30, 11 January 2014
Short description: | p5@ITGBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_5_at_ITGBL1_5end |
Coexpression cluster: | C698_Smooth_Adipocyte_Fibroblast_Preadipocyte_Olfactory_Ewing_basal |
Association with transcript: | -230bp_to_ENST00000376180, ENST00000478675, ENST00000537118, NM_004791, uc001vpb.2, uc001vpc.3, uc010agb.2_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | O95965F5GZX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.55e-15 | 76 |
preadipocyte | 2.04e-14 | 12 |
skeletal muscle myoblast | 1.24e-11 | 4 |
skin fibroblast | 5.46e-11 | 23 |
preadipocyte of the breast | 6.08e-10 | 3 |
adipocyte of omentum tissue | 6.82e-10 | 3 |
omentum preadipocyte | 1.11e-09 | 3 |
fat cell | 5.07e-09 | 15 |
multi fate stem cell | 3.22e-08 | 427 |
receptor cell | 5.22e-08 | 6 |
sensory epithelial cell | 5.22e-08 | 6 |
olfactory epithelial cell | 5.22e-08 | 6 |
somatic stem cell | 6.46e-08 | 433 |
stem cell | 1.58e-07 | 441 |
adipocyte of breast | 4.10e-07 | 2 |
fibroblast of tunica adventitia of artery | 7.30e-07 | 4 |
fibroblast of the aortic adventitia | 7.30e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.31e-18 | 6 |
peritoneum | 7.31e-18 | 6 |
abdominal cavity | 7.31e-18 | 6 |
visceral peritoneum | 7.31e-18 | 6 |
cavity lining | 1.73e-08 | 12 |
serous membrane | 1.73e-08 | 12 |
integument | 1.01e-07 | 46 |
integumental system | 1.01e-07 | 46 |
breast | 1.99e-07 | 10 |
systemic artery | 4.16e-07 | 33 |
systemic arterial system | 4.16e-07 | 33 |
perirenal fat | 6.12e-07 | 2 |
artery wall | 7.30e-07 | 4 |
tunica adventitia of artery | 7.30e-07 | 4 |
adventitia | 7.30e-07 | 4 |
tunica adventitia of blood vessel | 7.30e-07 | 4 |
aorta tunica adventitia | 7.30e-07 | 4 |
aorta wall | 7.30e-07 | 4 |