FFCP PHASE1:Hg19::chr13:93879548..93879566,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4454 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y625 | |||
|association_with_transcript=453bp_to_ENST00000377047_5end | |||
|description=CAGE_peak_5_at_GPC6_5end | |||
|id=chr13:93879548..93879566,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.14e-18!180;CL:0000057!4.93e-11!75;CL:0000136!1.84e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.06e-10;13!CL:0000153;3.18e-07;9!CL:0000447;3.18e-07;9!CL:0000138;6.94e-07;6!CL:0000499;8.17e-07;28!CL:0002494;8.84e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.35e-11,15;CL:0000057,4.69e-08,76;CL:0000153,2.98e-07,9;CL:0000447,2.98e-07,9;CL:0002494,6.32e-07,16;CL:0000058,6.49e-07,6;CL:0000138,6.49e-07,6;CL:0000499,8.23e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.25e-17!365;UBERON:0000481!6.73e-14!347;UBERON:0002100!2.15e-10!216;UBERON:0000119!2.65e-10!312;UBERON:0000483!4.48e-10!309;UBERON:0005256!3.29e-09!143;UBERON:0000477!6.86e-09!286;UBERON:0000468!1.54e-08!659;UBERON:0000025!1.86e-08!194;UBERON:0004111!7.28e-08!241;UBERON:0000948!8.63e-08!24;UBERON:0005498!8.63e-08!24;UBERON:0004140!8.63e-08!24;UBERON:0009881!8.63e-08!24;UBERON:0004141!8.63e-08!24;UBERON:0003084!8.63e-08!24;UBERON:0007005!8.63e-08!24;UBERON:0004139!8.63e-08!24;UBERON:0004291!8.63e-08!24;UBERON:0002385!1.73e-07!63;UBERON:0001015!1.73e-07!63;UBERON:0000383!1.73e-07!63;UBERON:0001134!6.17e-07!61;UBERON:0002036!6.17e-07!61;UBERON:0003082!6.17e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;7.38e-09;22!UBERON:0007100;4.47e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,5.62e-09,24;UBERON:0005498,5.62e-09,24;UBERON:0004140,5.62e-09,24;UBERON:0009881,5.62e-09,24;UBERON:0004141,5.62e-09,24;UBERON:0003084,5.62e-09,24;UBERON:0007005,5.62e-09,24;UBERON:0004139,5.62e-09,24;UBERON:0004291,5.62e-09,24;UBERON:0003104,4.59e-08,160;UBERON:0009142,4.59e-08,160;UBERON:0007100,2.87e-07,27;UBERON:0000479,5.07e-07,773;UBERON:0002385,7.42e-07,64;UBERON:0001015,7.42e-07,64;UBERON:0000383,7.42e-07,64 | |||
|phase1_expression=4.72363786103447,7.27941781229343,11.6992155399656,3.00219895059391,19.2193270603734,6.10636966870258,0,4.42203911398782,8.61912573059467,1.96587149201207,0.697801167972428,0,0,2.10402800032079,4.63956326019082,0,0,0.730310090387373,0,0.369363174230364,1.22400414746552,1.56727360739044,3.43483184557268,2.32686522623903,1.75759695432724,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,2.68280343881454,4.47518966452356,9.39741796199872,5.51471701699479,9.99440980829684,7.95285947051099,11.1926020169606,3.30871860074237,1.99556457716308,3.68906099911129,0.589405839739707,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,1.98788780678127,0.633152558322899,6.62045904066094,28.3968254541326,3.54668382198357,1.12135520028461,2.1349799145941,1.97334038733728,6.84664277879486,2.15537075311501,1.9615428373615,0.908144565869588,1.15235184896,0.70296429550139,0.624320153660641,0,0.298897361103602,1.64408298101271,0.809364721840658,1.12360645361799,0.408308342509787,0.61417158655884,1.54988671763648,1.18800285728205,1.48360157567134,0,0,1.0100166837244,0.875829639103749,0.277064115484183,0.877955241761676,0,3.75595147266492,0.680593098960126,2.51145489964407,1.49490172172997,1.69545520927649,3.30100205692843,3.19462840639161,3.34932702059318,2.97786970130544,3.54430297706659,1.65642908774038,3.78650661366172,2.02509777013059,1.2931684545505,7.81021103536552,3.02256294682921,0.169560592310488,0,0,0,0.365921118388786,0.397589304964456,0.580969714347592,0.621966330092223,0,0.36497735907583,0,0,0,3.25057549622385,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,46.8993628840774,10.8110993834539,17.1329072937607,0,0,2.91665277507493,0,0,0,0,0,0,1.44331342025273,2.89826012437692,8.92306076192245,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,2.1798003441664,0.36669142910475,4.39523833576444,3.57656445851882,0.845302752556,0,0,0.257207374262142,0,0,5.29018576535146,1.08524321078289,0,0.977208552881205,4.6200953336531,1.58390374586686,4.52159065589379,1.74306691720059,0.99972991182057,0,0,0,0,1.14861935834114,0,1.01346914667305,2.05476322550383,1.25342674267927,0,0,0,0,1.52456774533478,0,0,0.670065061337395,0.637938751653163,0,0,0,8.46571292862065,2.00068208423871,1.35632511849868,0.207970861530807,0.178428988797162,0,0.585707074963566,4.21324539618807,0,0,0,0.553107505625109,0.347534457872331,0.195801157462741,0.343143423810856,0,0,0,0,0,0,3.2254015016441,2.455391572609,3.64858122762996,5.25370511948374,1.53512174720011,8.5252578206112,1.48418066444991,0.154209693802656,1.42049380250502,0.98552587216571,2.07701771673448,0.581051892299796,0,0,0.0920809889358963,1.95184561879831,1.27463817604702,3.14698595902618,0.451199612907412,0.385076685522074,0.784349769176855,1.46139224653261,1.89992932007176,0,0,0.647747748306418,0,0.541892875087706,0.501689773854853,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0.984043937099117,0.650756789328606,7.21287081534056,0.457847324091717,0.742585499285292,0,0,1.6068392984416,2.03008508413456,2.46477787383431,2.14905144616581,1.7918754422989,2.25582514223375,2.0302337147992,1.53407929348982,4.27353771104339,0.165284915360978,0.384380134730212,0.127612712494584,0.6069466851333,1.85938219718914,12.9073062200562,0,1.23213432070436,0,2.60979897622522,0.18532421910392,2.28999818787186,0.372158369359667,1.2655176988749,3.43134349062885,0.255897791311334,7.27496279657665,5.72765846266686,1.56989728039846,2.87795932133304,2.19629623788844,3.29874726567922,0.606547444719948,0,1.68503382495592,0,1.94970791705028,1.05650146756755,3.27599787379166,3.39373036688911,5.65040583101214,3.30819206127675,0,0,0.578775534266688,0.655894752046633,0.811641507850816,0,0.845086807596724,0.573645408816206,0.687743287091848,0.35667105148125,1.41904425628239,6.12212142363226,7.57378253807774,0,0.349934720244983,0,0.670302275535787,0,7.81393546447267,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.635020748171649,0,1.12318871245384,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0.140669416410513,1.11308705022906,0,0,8.36841550654493,3.86797481743607,0,0.511343412510774,0,0.311039587661807,0.179736702294654,0,0,3.55116260292961,0,0,0,0.0927680981618513,1.99613798001194,0.520855522170466,0,3.62499787717397,0,1.27126825146383,0,0.689486746482929,0.291604613383254,2.77799991893268,0.885741385813839,0.241192877250816,1.52581736317083,1.10579259931225,0.591095237907095,0.87754158861589,0,0,2.5393585306253,8.77353830021909,0,0,0,0,0.0915975934018623,0,0,2.82564461511045,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0.995261931078505,1.50377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| |||
|short_description=p5@GPC6 | |||
}} |
Revision as of 18:16, 11 January 2014
Short description: | p5@GPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 453bp_to_ENST00000377047_5end |
EntrezGene: | GPC6 |
HGNC: | 4454 |
UniProt: | Q9Y625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.35e-11 | 15 |
fibroblast | 4.69e-08 | 76 |
GAG secreting cell | 2.98e-07 | 9 |
carbohydrate secreting cell | 2.98e-07 | 9 |
cardiocyte | 6.32e-07 | 16 |
chondroblast | 6.49e-07 | 6 |
chondrocyte | 6.49e-07 | 6 |
stromal cell | 8.23e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
heart | 5.62e-09 | 24 |
primitive heart tube | 5.62e-09 | 24 |
primary heart field | 5.62e-09 | 24 |
anterior lateral plate mesoderm | 5.62e-09 | 24 |
heart tube | 5.62e-09 | 24 |
heart primordium | 5.62e-09 | 24 |
cardiac mesoderm | 5.62e-09 | 24 |
cardiogenic plate | 5.62e-09 | 24 |
heart rudiment | 5.62e-09 | 24 |
mesenchyme | 4.59e-08 | 160 |
entire embryonic mesenchyme | 4.59e-08 | 160 |
primary circulatory organ | 2.87e-07 | 27 |
tissue | 5.07e-07 | 773 |
muscle tissue | 7.42e-07 | 64 |
musculature | 7.42e-07 | 64 |
musculature of body | 7.42e-07 | 64 |