FFCP PHASE1:Hg19::chr13:77459187..77459218,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:77459187..77459218,- | |||
|id=chr13:77459187..77459218,- | |||
|ontology_enrichment_celltype=CL:0002009!1.26e-10!65;CL:0002194!1.32e-10!63;CL:0000576!1.32e-10!63;CL:0000040!1.32e-10!63;CL:0000559!1.32e-10!63;CL:0002057!1.32e-10!42;CL:0000766!7.43e-10!76;CL:0000557!2.09e-09!71;CL:0000860!4.05e-09!45;CL:0000839!5.10e-09!70;CL:0000115!1.57e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002619;5.15e-09;3!CL:0002144;5.73e-09;3!CL:0000860;6.85e-08;33!CL:0002057;6.85e-08;33!CL:0000473;8.61e-07;39!CL:0000234;8.61e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.14e-09,3;CL:0002144,4.22e-09,3;CL:0002194,2.80e-07,59;CL:0000576,2.80e-07,59;CL:0000040,2.80e-07,59;CL:0000559,2.80e-07,59;CL:0000766,3.84e-07,72;CL:0002009,6.30e-07,61;CL:0000115,9.24e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.40e-16!115;UBERON:0000467!9.07e-16!625;UBERON:0000480!1.32e-15!626;UBERON:0000468!4.07e-14!659;UBERON:0000923!1.92e-13!604;UBERON:0005291!1.92e-13!604;UBERON:0006598!1.92e-13!604;UBERON:0002532!1.92e-13!604;UBERON:0002050!2.74e-13!605;UBERON:0005423!2.74e-13!605;UBERON:0000922!5.47e-13!612;UBERON:0000062!7.49e-09!511;UBERON:0000926!1.99e-08!448;UBERON:0004120!1.99e-08!448;UBERON:0006603!1.99e-08!448;UBERON:0003081!2.02e-08!216;UBERON:0000477!5.13e-08!286;UBERON:0002204!8.35e-08!167;UBERON:0004111!1.98e-07!241;UBERON:0000479!2.24e-07!787;UBERON:0002371!3.70e-07!80;UBERON:0004765!5.20e-07!101;UBERON:0001434!5.20e-07!101;UBERON:0000119!5.45e-07!312;UBERON:0000483!7.12e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.73e-09;3!UBERON:0001915;5.73e-09;3!UBERON:0001982;5.73e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.22e-09,3;UBERON:0001915,4.22e-09,3;UBERON:0001982,4.22e-09,3;UBERON:0000926,2.96e-07,315;UBERON:0004120,2.96e-07,315;UBERON:0006603,2.96e-07,315;UBERON:0003081,4.17e-07,203 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,5.15005590751826,4.53451132426571,1.80302897343931,2.03557534291391,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0,0.863077176966451,0.512321413058201,0.709446689665756,2.06847408441971,1.93645405075148,1.35426486594342,1.12945403725563,2.18324920046277,0,2.14258724659632,1.28371610830437,3.19668562899521,2.30895910130701,1.99463657621632,1.27867425159808,0.290209238628584,0.56738522469114,0.622822248995575,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0.44931452458598,0.750884464207532,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.434539556882471,0,0.973269740605272,0,0,0,0.327447688744282,0,0,0,0.174129737299267,0.797747763113191,0.238490624305342,0,0,0.39752481473341,0,0,0,0,1.92582629358047,0.208994966536811,0.775250277507987,0,0,3.22263453687318,1.52054421143703,5.6134273236079,1.10298924103761,0.81014194788176,0.714397826272638,0,0.675668882899933,0,0.949265659568129,0.366403487860815,1.31780417436063,0,0,0,1.51956613997496,0,0,2.12801029319014,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0,3.74592092196385,0,2.83952493048422,0.117434498643765,0.161872944368132,0,0,0.368502951935304,0.619954687054593,3.56400857184616,1.7308685049499,0,0,0.673344455816265,0.250237039743928,0,0.438977620880838,0.612975591598039,0.300476117813194,0,0,0,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0,0,0,0,1.61646056818812,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0,0,0.548751427043128,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0.721832238805369,0.925971025153221,2.28304982681518,0,0,0.492434012174795,0.234004265139238,0.594524649154913,0,0.503946384596579,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0,0,0.448524337381443,0,0.07333828582095,0,0,0.845302752556,0.797814349754612,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,1.42636905040718,0,0.410952645100767,0,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,5.9832291840805,0.414415513436035,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,2.27407504055985,2.0694614258501,0,0,0.781952530212746,0,0.343143423810856,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0.744323423456331,0,0,0.256278298511402,0,0.482561763430822,0,0.308419387605311,2.13074070375753,0.410635780069046,3.63478100428535,0.464841513839837,0.241718899183244,1.00253235151642,0.368323955743585,0,0,0.262248829918848,0,0,0,0,0.105551628892876,2.27466768141793,0.510281115829547,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,1.03041011647722,0.0915694648183434,0,0,0,1.6068392984416,1.16004861950546,0.154048617114644,0.460511024178389,0,0.107420244868274,0,0.170453254832202,0.534192213880424,0.330569830721956,0.384380134730212,0,0.10115778085555,0.929691098594572,0,0.6970372701606,0,0,0.869932992075073,0.55597265731176,0.715624433709956,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0,0.78494864019923,0,0.274537029736055,0,0.404364963146632,0,0,0,1.94970791705028,0,0,0.565621727814851,0,0,1.32687795048244,1.75380354101505,0.578775534266688,1.31178950409327,0.202910376962704,0,0,0,0,0,0,0.422215270595328,1.31717957183961,0.75894634753143,0.349934720244983,0,0,0,1.41215701165169,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68826173670061,0,0,0,0.47748896947538,0,0.307160702099232,0,0.422008249231538,0.445234820091624,0,0,0.597743964753209,1.10513566212459,1.0077309914171,0,0.123084805461069,0.311039587661807,0.0898683511473268,0.179021174675609,0,0.690503839458535,2.3948309234694,0,0,0.556608588971108,0,0,0,5.07499702804355,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,1.21637185924347,0.591095237907095,0,0,0,1.92375646259493,0.227884111694002,0,0.718061155278177,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.884575645033392,0,0,0,0,0.202203398942031,0,0.702793337176017,0,0,0,0.394584402849391,1.20990716048664,0,0.947798694427319,1.05226393590145,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,1.22308667769421,0,0,0,0,1.35784623083787,0.0882561266915003,0,0,0,0.0633107959558787,0,0.0801588202515337,0.85381197895741,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.8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| |||
|short_description=p@chr13:77459187..77459218,- | |||
}} |
Revision as of 18:06, 11 January 2014
Short description: | p@chr13:77459187..77459218, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:77459187..77459218, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.14e-09 | 3 |
capillary endothelial cell | 4.22e-09 | 3 |
monopoietic cell | 2.80e-07 | 59 |
monocyte | 2.80e-07 | 59 |
monoblast | 2.80e-07 | 59 |
promonocyte | 2.80e-07 | 59 |
myeloid leukocyte | 3.84e-07 | 72 |
macrophage dendritic cell progenitor | 6.30e-07 | 61 |
endothelial cell | 9.24e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 4.22e-09 | 3 |
endothelium of capillary | 4.22e-09 | 3 |
capillary | 4.22e-09 | 3 |
mesoderm | 2.96e-07 | 315 |
mesoderm-derived structure | 2.96e-07 | 315 |
presumptive mesoderm | 2.96e-07 | 315 |
lateral plate mesoderm | 4.17e-07 | 203 |